Corrupt line from RUM_NU #181
Description
Hi,
We are using RUM version v2.0.5_04 and have encountered the following type of errors:
Wed Apr 23 23:56:39 2014 13352 FATAL RUM::Death - Corrupt line from RUM_NU: 'seq.26625731a chr10 69676567-69676568 + ' on line 5018036 at /usr/local/share/perl/5.14.2/RUM/Script/RumToSam.pm line 358, line 5018036.
Wed Apr 23 23:56:39 2014 11501 FATAL RUM::Death -
Error running "perl /usr/local/bin/../bin/rum2sam.pl --genome-in /home/DATA/PREFIX/hg19/hg19_genome_one-line-seqs.fa ..........................
If you can advise if there is a workaround for this issue or if more details are required for troubleshooting, please let me know.
Regards,
Audrey