[Long-Term Fix] Restructure Project Directory for Improved Maintainability

[leebrandt]

The current project directory structure ([grind-workspace]/[project-name]/[projects]/[project-name]) is unnecessarily duplicated and complicates project navigation. This issue aims to refactor the project structure to a simpler, more maintainable format ([grind-workspace]/[project-name]/[project-stuff]). This will involve updating file paths and potentially modifying the open command (after Issue #1 is complete).

Acceptance Criteria:

• The duplicated [projects] directory is removed.
• All project files are accessible in the new directory structure.
• The open command continues to function correctly after the refactor.
• Existing project data and history are preserved.

Tasks:

1. Backup the project: Create a full backup of the grind-workspace directory. CRITICAL!
2. Analyze all file paths to identify necessary changes.
3. Rename and move directories and files to the new structure.
4. Update any relevant configuration files or scripts to reflect the new paths.
5. Test the open command thoroughly to ensure it still works correctly.
6. (Optional) Update documentation to reflect the new project structure.