Skip to content

LEGEND Snakemake plugin #102

@gipert

Description

@gipert

We should start to setup a Snakemake plugin soon. Wishlist:

  • touch option to just replace every rule command/script with just touch {output}
  • execenv command wrapping functionality
  • setup execenv in profile files
  • populate Numba cache on start, one-threaded
  • write to scratch space and then move to the slow filesystem (check if there are existing solutions)

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions