Problem running PlasTaxo.sh

[eperezv]

Hello,

I have problems when running PlasTaxo.sh. Do you have any clue about why it is failing? I appreciate any help.

(base) e@e-PC:/PlasSuite$ bash PlasTaxo.sh --predicted_plasmids_dir GTBA_resultsPlasPredict --predicted_plasmids_prefix contigsr500 -o GTBA_resultsPlasTaxo --prefix contigsr500
[PlasTaxo] Input directory found in GTBA_resultsPlasPredict
[PlasTaxo] Plasmids taxonomy found in /home/eduardo/plasmidome_databases/all_plasmids.taxo.tsv
[PlasTaxo] Chromosomes taxonomy found in /home/eduardo/plasmidome_databases/all_prokaryotes.taxo.tsv
[PlasTaxo] RNA taxonomy found in /home/eduardo/plasmidome_databases/rRNA/SILVA_132_SSUParc_LSUParc_tax_silva_trunc.T.taxo.tsv
[PlasTaxo] Chromosomes alignment found in GTBA_resultsPlasPredict/chrm_search/contigsr500.0.8.paf
[PlasTaxo] PlasFlow taxonomy found in GTBA_resultsPlasPredict/learning/contigsr500.plasflow0.7.taxo
[PlasTaxo] rRNA alignment found in GTBA_resultsPlasPredict/rna_search/contigsr500.rna.blast.all.contigs.tsv
[PlasTaxo] Plasmids alignment found in GTBA_resultsPlasPredict/plasmids_search/contigsr500.0.8.paf
=== TREAT ASSEMBLY TAXONOMY ===
Traceback (most recent call last):
  File "/home/eduardo/tools/PlasSuite/bin/comp_taxo.py", line 90, in <module>
    same_plasflow_chrm=compare_two_taxo(plasflow,chrm,ncbi)
  File "/home/eduardo/tools/PlasSuite/bin/comp_taxo.py", line 18, in compare_two_taxo
    taxid2=ncbi.get_name_translator([taxo2])[taxo2][0]
KeyError: 'Burkholderia sp. OLGA172'