Dear Gota Morota!
I have to run wombat tool but i am stuck in creating parameter file. Please guide how can i calculate upper triangle of random effects covariances and upper triangle residual covariances. Can wombat automatically calculate if not given in parameter file.
Also I am confused that which example file should i use for perfoming multi-trait GWAS analysis using snappy parameter for my 194 genotypes and 21 traits.
It is to bring into your kind consideration that there is only one causal trait in my data.
Looking forward to your kind guidance.
Thanks a lot
Dear Gota Morota!
I have to run wombat tool but i am stuck in creating parameter file. Please guide how can i calculate upper triangle of random effects covariances and upper triangle residual covariances. Can wombat automatically calculate if not given in parameter file.
Also I am confused that which example file should i use for perfoming multi-trait GWAS analysis using snappy parameter for my 194 genotypes and 21 traits.
It is to bring into your kind consideration that there is only one causal trait in my data.
Looking forward to your kind guidance.
Thanks a lot