dotfiles/software at main · mpjw/dotfiles · GitHub

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#!/usr/bin/sh

# install software stack for debian based systems (e.g. Ubuntu)

# [flatpak](https://flatpak.org/setup/Ubuntu)
sudo apt install flatpak
sudo apt install gnome-software-plugin-flatpak
sudo flatpak remote-add --if-not-exists flathub https://dl.flathub.org/repo/flathub.flatpakrepo

# reboot

# flatpak installs
flatpak install

# basic Linux tools
sudo apt install vim git htop terminator

# links for custom software installation
wget -P ~/Downloads/ https://github.com/conda-forge/miniforge/releases/latest/download/Miniforge3-$(uname)-$(uname -m).sh
chmod u+x ~/Downloads/Miniforge3-$(uname)-$(uname -m).sh
~/Downloads/Miniforge3-Linux-x86_64.sh

conda update -n base conda
conda install -n base conda-libmamba-solver
conda config --set solver libmamba

# VS code from https://code.visualstudio.com/docs/setup/linux

# programming lang
sudo apt install python3

# R from https://cran.rstudio.com/
# update indices
sudo apt update -qq
# install two helper packages we need
sudo apt install --no-install-recommends software-properties-common dirmngr
# add the signing key (by Michael Rutter) for these repos
# To verify key, run gpg --show-keys /etc/apt/trusted.gpg.d/cran_ubuntu_key.asc
# Fingerprint: E298A3A825C0D65DFD57CBB651716619E084DAB9
wget -qO- https://cloud.r-project.org/bin/linux/ubuntu/marutter_pubkey.asc | sudo tee -a /etc/apt/trusted.gpg.d/cran_ubuntu_key.asc
# add the repo from CRAN -- lsb_release adjusts to 'noble' or 'jammy' or ... as needed
sudo add-apt-repository "deb https://cloud.r-project.org/bin/linux/ubuntu $(lsb_release -cs)-cran40/"
# install R itself
sudo apt install --no-install-recommends r-base

# Docker from https://docs.docker.com/engine/install/ubuntu/#install-using-the-repository
# Add Docker's official GPG key:
sudo apt-get update
sudo apt-get install ca-certificates curl
sudo install -m 0755 -d /etc/apt/keyrings
sudo curl -fsSL https://download.docker.com/linux/ubuntu/gpg -o /etc/apt/keyrings/docker.asc
sudo chmod a+r /etc/apt/keyrings/docker.asc

# Add the repository to Apt sources:
echo \
  "deb [arch=$(dpkg --print-architecture) signed-by=/etc/apt/keyrings/docker.asc] https://download.docker.com/linux/ubuntu \
  $(. /etc/os-release && echo "${UBUNTU_CODENAME:-$VERSION_CODENAME}") stable" | \
  sudo tee /etc/apt/sources.list.d/docker.list > /dev/null
sudo apt-get update
sudo apt-get install docker-ce docker-ce-cli containerd.io docker-buildx-plugin docker-compose-plugin
sudo docker run hello-world

# LRZ sync + share from https://sasrepo.nas.lrz.de/apt/README.txt or https://sasrepo.nas.lrz.de/
sudo echo "Adding LRZ Sync+Share public key..." && wget -O- https://sasrepo.nas.lrz.de/lrz-sasrepo-signing-gpg-key-g1.asc | gpg --dearmor | sudo tee /etc/apt/keyrings/lrz-syncandshare-archive-keyring.gpg > /dev/null && echo "Saved as:" && ls -l /etc/apt/keyrings/lrz-syncandshare-archive-keyring.gpg
sudo echo -e "Types: deb\nURIs: https://deb.sasrepo.nas.lrz.de/stable\nSuites: stable\nArchitectures: amd64\nComponents: main\nSigned-By: /etc/apt/keyrings/lrz-syncandshare-archive-keyring.gpg" | sudo tee /etc/apt/sources.list.d/lrz-syncandshare.sources
sudo echo -e "Package: *\nPin: origin deb.sasrepo.nas.lrz.de\nPin-Priority: 100" | sudo tee /etc/apt/preferences.d/lrz-syncandshare.pref
sudo apt-get update
sudo apt install lrz-sync-share