Data download request: tractometry ecosystem

[arokem]

PLEASE ANSWER THE FOLLOWING QUESTIONS

1. 📂 Which preprint repository will use this dataset for a NeuroLibre submission?

https://github.com/tractometry/tractometry-ecosystem

2. 📄 Does the repository contain a binder/data_requirements.json file?

✅ Yes

3. 🔗 Please provide a download Link:

https://drive.google.com/uc?id=1TCurnGSzW_GGZX2LsGz1VZn9TxW5Rc4e

4. 🫣 What is the data size (please indicate the size after decompression):

4.5GB

[agahkarakuzu]

@roboneuro cache data for https://github.com/tractometry/tractometry-ecosystem

[roboneuro]

Pinging roboneuro to download the data for tractometry/tractometry-ecosystem

[roboneuro]

⚫ DOWNLOAD (CACHE) DATA

Status: Waiting for task assignment
Last updated: 2025-02-10 12:55:17 PST

ℹ️ See details

Celery task assigned successfully. Task ID: cc05ce89-d3ed-4b22-b8ac-1c2b9da3ac0c

[roboneuro]

🔴 DOWNLOAD (CACHE) DATA

Status: Failed cc05ce89
Last updated: 2025-02-10 12:55:23 PST

Data download has failed: Command '['python3', '-c', "import afq.data as afd; afd.organize_stanford_data(clear_previous_afq='track')"]' returned non-zero exit status 1.

[agahkarakuzu]

I see why this is happening, the dependencies put in the data_requirement are not included in the base env. @arokem can you update the source (data_requirement.json) to use google drive as src? I added instructions in the email.

[arokem]

Oh - I thought I had done that, but it turns out I didn't push the changes... Now pushed. Is there a way to ask roboneuro to try again?

[arokem]

@roboneuro cache data for https://github.com/tractometry/tractometry-ecosystem

[roboneuro]

You are not authorized to perform this action.

[arokem]

Well, I tried.

[agahkarakuzu]

@roboneuro cache data for https://github.com/tractometry/tractometry-ecosystem

[roboneuro]

Pinging roboneuro to download the data for tractometry/tractometry-ecosystem

[roboneuro]

⚫ DOWNLOAD (CACHE) DATA

Status: Waiting for task assignment
Last updated: 2025-02-10 14:02:07 PST

ℹ️ See details

Celery task assigned successfully. Task ID: 5c2221ec-4cc3-48e6-8fb5-cf3b28b66df3

[roboneuro]

🔴 DOWNLOAD (CACHE) DATA

Status: Failed 5c2221ec
Last updated: 2025-02-10 14:02:12 PST

Caution

😩 I already have data for tractometry downloaded to /DATA/tractometry. I will skip downloading data to avoid overwriting a dataset from a different preprint. Please set overwrite=True if you really know what you are doing.