From c87e77e54684c20c533b5a92bf995410efc3f249 Mon Sep 17 00:00:00 2001 From: Mehdi Rahim Date: Sat, 22 Apr 2017 20:31:00 +0200 Subject: [PATCH 1/3] spm12 integration --- circle.yml | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/circle.yml b/circle.yml index bd1e5470..85044654 100644 --- a/circle.yml +++ b/circle.yml @@ -1,11 +1,11 @@ machine: environment: - SPM_DIR: /home/ubuntu/opt/spm8/spm8_mcr/spm8 - SPM_MCR: /home/ubuntu/opt/spm8/spm8.sh + SPM_DIR: /home/ubuntu/opt/spm12/spm12_mcr/spm12 + SPM_MCR: /home/ubuntu/opt/spm12/spm12.sh dependencies: cache_directories: - - "~/opt/spm8" + - "~/opt/spm12" - "~/nilearn_data" pre: @@ -13,7 +13,7 @@ dependencies: - sudo apt-get update - sudo apt-get install libxp6 libxpm4 libxmu6 libxt6 bc # Installing SPM - - source continuous_integration/setup_spm.sh + - source continuous_integration/setup_spm12.sh # Installing Pypreprocess dependencies - pip install --upgrade pip - | From 74992aee14ca5a2c12aeb3262eeee111cf3e772f Mon Sep 17 00:00:00 2001 From: Mehdi Rahim Date: Sat, 22 Apr 2017 20:33:52 +0200 Subject: [PATCH 2/3] spm12 integration --- circle.yml | 2 +- continuous_integration/setup_spm.sh | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/circle.yml b/circle.yml index 85044654..d6cf2890 100644 --- a/circle.yml +++ b/circle.yml @@ -13,7 +13,7 @@ dependencies: - sudo apt-get update - sudo apt-get install libxp6 libxpm4 libxmu6 libxt6 bc # Installing SPM - - source continuous_integration/setup_spm12.sh + - source continuous_integration/setup_spm.sh # Installing Pypreprocess dependencies - pip install --upgrade pip - | diff --git a/continuous_integration/setup_spm.sh b/continuous_integration/setup_spm.sh index 46acbb9a..a69d88ba 100644 --- a/continuous_integration/setup_spm.sh +++ b/continuous_integration/setup_spm.sh @@ -1,7 +1,7 @@ #!/bin/bash set -e -SPM_INSTALL_SCRIPT=continuous_integration/install_spm.sh +SPM_INSTALL_SCRIPT=continuous_integration/install_spm12.sh echo "" echo "SPM_INSTALL_SCRIPT: $SPM_INSTALL_SCRIPT" sudo bash $SPM_INSTALL_SCRIPT From ffab51b089501cde0f3f54f7d1ca56f818068cf4 Mon Sep 17 00:00:00 2001 From: Mehdi Rahim Date: Sat, 22 Apr 2017 20:38:03 +0200 Subject: [PATCH 3/3] spm12 integration --- continuous_integration/install_spm12.sh | 5 ++--- 1 file changed, 2 insertions(+), 3 deletions(-) diff --git a/continuous_integration/install_spm12.sh b/continuous_integration/install_spm12.sh index e9dc5436..1c1a99e5 100644 --- a/continuous_integration/install_spm12.sh +++ b/continuous_integration/install_spm12.sh @@ -5,13 +5,13 @@ set -e SPM_ROOT_DIR=~/opt/spm12 # Installation directory -SPM_SRC=spm12_r6685.zip +SPM_SRC=spm12_r6914.zip MCRINST=MCRInstaller.bin mkdir -p $SPM_ROOT_DIR && cd $SPM_ROOT_DIR if [ ! -d spm12 ]; then - if [ ! -f ${SPM_SRC} ]; then + if [ ! -f ${SPM_SRC} ]; then wget http://www.fil.ion.ucl.ac.uk/spm/download/restricted/utopia/${SPM_SRC} fi unzip -q ${SPM_SRC} @@ -44,4 +44,3 @@ ${cmds} echo "You may want to add the following commands (the exports) to your ~/.bashrc file once and for all." echo echo ${cmds} -