diff --git a/modules/nf-core/gatk4/preprocessintervals/main.nf b/modules/nf-core/gatk4/preprocessintervals/main.nf index 3d63502..5686bda 100644 --- a/modules/nf-core/gatk4/preprocessintervals/main.nf +++ b/modules/nf-core/gatk4/preprocessintervals/main.nf @@ -15,7 +15,7 @@ process GATK4_PREPROCESSINTERVALS { tuple val(meta5), path(exclude_intervals) output: - tuple val(meta), path("*.interval_list"), emit: interval_list + tuple val(meta), path("*.preprocessed.interval_list"), emit: interval_list path "versions.yml", emit: versions when: @@ -41,7 +41,7 @@ process GATK4_PREPROCESSINTERVALS { ${include_command} \\ ${exclude_command} \\ --reference ${fasta} \\ - --output ${prefix}.interval_list \\ + --output ${prefix}.preprocessed.interval_list \\ ${args} cat <<-END_VERSIONS > versions.yml