From ecfac34ec27170906ddf06848cc9724c024e3de2 Mon Sep 17 00:00:00 2001 From: "James A. Fellows Yates" Date: Mon, 20 Apr 2026 12:55:57 +0200 Subject: [PATCH] Add CI test data information to README Added CI test data section with details on synthetic reads. --- README.md | 4 ++++ 1 file changed, 4 insertions(+) diff --git a/README.md b/README.md index 40d5f9fbb..a101400f6 100644 --- a/README.md +++ b/README.md @@ -6,6 +6,10 @@ Test data to be used for automated testing with the nf-core pipelines This branch contains test data for the [nf-core/mag](https://github.com/nf-core/mag) pipeline. +## CI test data + +The `test_minigut` test datasets are synthetic reads generated from a single genome of a mammalian-gut-residing Bacteroides fragilis* YCH46 bacterium (NCBI accession: NC_006347). + ## Full-size test data The `manifext.full.tsv` links to gut metagenome data of antibiotic-treated patients originating from [Bertrand et al. _Nature Biotechnology_ (2019)](https://doi.org/10.1038/s41587-019-0191-2).