### Description of feature - [x] bcftools/reheader - [x] bcftools/rename - [x] bgzip/tabix - [x] sort_bed -> gnu/sort - [ ] <del> subtract_vcf -> bcftools/isec </del> (SV analyser output is not a VCF file ) - [x] variant_extractor -> https://github.com/nf-core/modules/issues/9996 - [x] reformat_header -> nf-core/gawk - [ ] vcf_to_csv -> gatk4/variantstotable - [x] publish_processed_vcfs -> ideally deleted (TBD)
Description of feature
subtract_vcf -> bcftools/isec(SV analyser output is not a VCF file )