Conda installable?

[jolespin]

Is it possible to make this conda installable? I'm thinking about adding it to a new module in my VEBA package but since there are so many packages in so many modules I can only incorporate packages that are available through conda.

Publication:
https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-022-04973-8

Repository:
https://github.com/jolespin/veba

[nselem]

Hello jolespin,
we are working on a python version, and we are on the heatmap right now. We have some advances in a conda installation but Im stopped because I was thinking of changing the phylogeny tool so that it can also work on windows. So we are working on that actively but it is not yet ready ¿perhaps you would like to discuss it a little bit?

[jolespin]

we are working on a python version, and we are on the heatmap right now.

Sounds great! I'm sure you're probably already using seaborn for the heatmaps but if not, it's worth checking out. Much easier than standard matplotlib to customize.

We have some advances in a conda installation but Im stopped because I was thinking of changing the phylogeny tool so that it can also work on windows. So we are working on that actively but it is not yet ready ¿perhaps you would like to discuss it a little bit?

Hmm...for my 2 cents, a huge proportion of bioinformaticians use MacOS or Linux; the latter especially true for power users. There's a lot of packages that don't work on windows machines. Especially since Windows users can dual boot with Ubuntu if they really want to run it locally.

[nselem]

@CsarMijangos Is working on this, yeah we probably stay with fastTree only for mac , linux and LWS