From 36eeb96bd862584d035faf668fa52de200d5e8bd Mon Sep 17 00:00:00 2001 From: Uxue Lazkano Dobao Date: Wed, 16 Oct 2019 20:17:00 +0200 Subject: [PATCH] fix sample sheet create columns --- R/create-samplesheet.r | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/R/create-samplesheet.r b/R/create-samplesheet.r index f2ac5f5..4747c4d 100644 --- a/R/create-samplesheet.r +++ b/R/create-samplesheet.r @@ -20,8 +20,8 @@ meffil.create.samplesheet <- function(path, basenames=meffil.basenames(path,recu sentrixpos <- grep("^R[0-9][0-9]C[0-9][0-9]$", as.character(unlist(dat[1,]))) if(length(sentrixpos)==1) { temp <- do.call(rbind, strsplit(as.character(dat[,sentrixpos]), split="C")) - dat$sentrix_row <- gsub("R", "", temp[,1]) - dat$sentrix_col <- temp[,2] + dat$Sentrix_Position <- gsub("R", "", temp[,1]) + dat$Sentrix_ID <- temp[,2] dat <- dat[,-sentrixpos] }