diff --git a/docs/context/development/phyx.json b/docs/context/development/phyx.json
index ad56db35..459277a3 100644
--- a/docs/context/development/phyx.json
+++ b/docs/context/development/phyx.json
@@ -4,6 +4,7 @@
     "rdf": "http://www.w3.org/1999/02/22-rdf-syntax-ns#",
     "rdfs": "http://www.w3.org/2000/01/rdf-schema#",
     "owl": "http://www.w3.org/2002/07/owl#",
+    "skos": "http://www.w3.org/2004/02/skos/core#",
 
     "obo": "http://purl.obolibrary.org/obo/",
     "dwc": "http://rs.tdwg.org/dwc/terms/",
@@ -186,6 +187,12 @@
 
     "title": "dct:title",
 
-    "representsTaxonomicUnits": "obo:CDAO_0000187"
+    "representsTaxonomicUnits": "obo:CDAO_0000187",
+
+    "apomorphy": "testcase:apomorphy",
+    "exactMatch": {
+      "@id": "skos:exactMatch",
+      "@type": "@id"
+    }
   }
 }
diff --git a/docs/context/development/schema.json b/docs/context/development/schema.json
index dfdfeec5..72e5ed9b 100644
--- a/docs/context/development/schema.json
+++ b/docs/context/development/schema.json
@@ -1,5 +1,23 @@
 {
   "definitions": {
+    "id": {
+      "type": "object",
+      "description": "Any entity that can be identified by a URI.",
+      "additionalProperties": false,
+      "properties": {
+        "@id": {
+          "type": "string",
+          "description": "The URI used to identify this entity.",
+          "minLength": 1
+        },
+        "@type": {
+          "type": "string",
+          "description": "The type of this entity.",
+          "minLength": 1
+        }
+      },
+      "required": [ "@id" ]
+    },
     "agent": {
       "type": "object",
       "description": "A person or entity.",
@@ -111,9 +129,7 @@
             }
           },
           "required": [
-            "name",
-            "volume",
-            "identifier"
+            "name"
           ]
         },
         "identifier": {
@@ -164,6 +180,9 @@
             "http://rs.tdwg.org/dwc/terms/Occurrence"
           ]
         },
+        "rdf:ID": {
+          "$ref": "#/definitions/id"
+        },
         "label": {
           "type": "string",
           "minLength": 1
@@ -201,8 +220,6 @@
           },
           "required": [
             "@type",
-            "nomenclaturalCode",
-            "label",
             "nameComplete"
           ]
         }
@@ -277,7 +294,7 @@
       "minItems": 0,
       "items": {
         "required": [
-          "cladeDefinition"
+          "definition"
         ],
         "properties": {
           "regnumId": {
@@ -285,6 +302,14 @@
             "description": "The identifier of this clade definition in the Regnum database",
             "minLength": 1
           },
+          "phylorefType": {
+            "description": "The type of this phyloreference.",
+            "enum": [
+              "phyloref:PhyloreferenceUsingMaximumClade",
+              "phyloref:PhyloreferenceUsingMinimumClade",
+              "phyloref:PhyloreferenceUsingApomorphy"
+            ]
+          },
           "label": {
             "type": "string",
             "description": "The name or label of this phyloreference."
@@ -313,7 +338,10 @@
             "uniqueItems": true,
             "minItems": 1,
             "items": {
-              "$ref": "#/definitions/taxonomic_unit"
+              "anyOf": [
+                { "$ref": "#/definitions/taxonomic_unit" },
+                { "$ref": "#/definitions/id" }
+              ]
             }
           },
           "externalSpecifiers": {
@@ -322,7 +350,10 @@
             "uniqueItems": true,
             "minItems": 0,
             "items": {
-              "$ref": "#/definitions/taxonomic_unit"
+              "anyOf": [
+                { "$ref": "#/definitions/taxonomic_unit" },
+                { "$ref": "#/definitions/id" }
+              ]
             }
           }
         }
diff --git a/src/wrappers/PhylorefWrapper.js b/src/wrappers/PhylorefWrapper.js
index b6233502..09f3342f 100644
--- a/src/wrappers/PhylorefWrapper.js
+++ b/src/wrappers/PhylorefWrapper.js
@@ -2,6 +2,7 @@
 const moment = require('moment');
 const { has, cloneDeep } = require('lodash');
 
+const owlterms = require('../utils/owlterms');
 const { TaxonomicUnitWrapper } = require('./TaxonomicUnitWrapper');
 const { PhylogenyWrapper } = require('./PhylogenyWrapper');
 
@@ -369,10 +370,56 @@ class PhylorefWrapper {
   }
 
   static getIncludesRestrictionForTU(tu) {
+    const tunit = new TaxonomicUnitWrapper(tu).asOWLEquivClass;
+
+    if (has(tunit, '@id')) {
+      // This is a reference! So we treat it differently.
+      const type = tunit['@type'] || '';
+      if (type === 'phyloref:Phyloreference') {
+        // Phyloreferences need to be incorporated directly with a `some` clause.
+        return {
+          '@type': 'owl:Restriction',
+          onProperty: owlterms.CDAO_HAS_DESCENDANT,
+          someValuesFrom: tunit,
+        };
+      }
+
+      // If it's not a Phyloreference, we assume that it is an opaque taxonomic
+      // unit that has been identified with its own URI. In that case, we need
+      // to use the same EXCLUDES_TU property that we usually use.
+    }
+
+    return {
+      '@type': 'owl:Restriction',
+      onProperty: owlterms.PHYLOREF_INCLUDES_TU,
+      someValuesFrom: tunit,
+    };
+  }
+
+  static getExcludesRestrictionForTU(tu) {
+    const tunit = new TaxonomicUnitWrapper(tu).asOWLEquivClass;
+
+    if (has(tunit, '@id')) {
+      // This is a reference! So we treat it differently.
+      const type = tunit['@type'] || '';
+      if (type === 'phyloref:Phyloreference') {
+        // Phyloreferences need to be incorporated directly with a `some` clause.
+        return {
+          '@type': 'owl:Restriction',
+          onProperty: owlterms.PHYLOREF_EXCLUDES_LINEAGE_TO,
+          someValuesFrom: tunit,
+        };
+      }
+
+      // If it's not a Phyloreference, we assume that it is an opaque taxonomic
+      // unit that has been identified with its own URI. In that case, we need
+      // to use the same EXCLUDES_TU property that we usually use.
+    }
+
     return {
       '@type': 'owl:Restriction',
-      onProperty: 'phyloref:includes_TU',
-      someValuesFrom: new TaxonomicUnitWrapper(tu).asOWLEquivClass,
+      onProperty: owlterms.PHYLOREF_EXCLUDES_TU,
+      someValuesFrom: tunit,
     };
   }
 
@@ -387,11 +434,7 @@ class PhylorefWrapper {
       someValuesFrom: {
         '@type': 'owl:Class',
         intersectionOf: [
-          {
-            '@type': 'owl:Restriction',
-            onProperty: 'phyloref:excludes_TU',
-            someValuesFrom: new TaxonomicUnitWrapper(tu1).asOWLEquivClass,
-          },
+          PhylorefWrapper.getExcludesRestrictionForTU(tu1),
           PhylorefWrapper.getIncludesRestrictionForTU(tu2),
         ],
       },
@@ -530,11 +573,7 @@ class PhylorefWrapper {
       '@type': 'owl:Class',
       intersectionOf: [
         includedExpr,
-        {
-          '@type': 'owl:Restriction',
-          onProperty: 'phyloref:excludes_TU',
-          someValuesFrom: new TaxonomicUnitWrapper(tu).asOWLEquivClass,
-        },
+        PhylorefWrapper.getExcludesRestrictionForTU(tu),
       ],
     }];
 
@@ -549,11 +588,7 @@ class PhylorefWrapper {
           {
             '@type': 'owl:Restriction',
             onProperty: 'obo:CDAO_0000144', // has_Ancestor
-            someValuesFrom: {
-              '@type': 'owl:Restriction',
-              onProperty: 'phyloref:excludes_TU',
-              someValuesFrom: new TaxonomicUnitWrapper(tu).asOWLEquivClass,
-            },
+            someValuesFrom: PhylorefWrapper.getExcludesRestrictionForTU(tu),
           },
         ],
       });
@@ -664,12 +699,31 @@ class PhylorefWrapper {
     const internalSpecifiers = phylorefAsJSONLD.internalSpecifiers || [];
     const externalSpecifiers = phylorefAsJSONLD.externalSpecifiers || [];
 
+    // If it is an apomorphy-based class expression, we can't generate logical
+    // expressions for it anyway.
+    const phylorefType = phylorefAsJSONLD.phylorefType;
+    if (
+      (phylorefType && phylorefType === 'phyloref:PhyloreferenceUsingApomorphy')
+      || (has(phylorefAsJSONLD, 'apomorphy'))
+    ) {
+      // This is an apomorphy-based definition!
+      phylorefAsJSONLD.subClassOf = [
+        'phyloref:Phyloreference',
+        'phyloref:PhyloreferenceUsingApomorphy',
+      ];
+
+      return phylorefAsJSONLD;
+    }
+
     // We might need to make component classes.
     // So we reset our component class counts and records.
     PhylorefWrapper.componentClassCount = 0;
     PhylorefWrapper.componentClassesByLabel = {};
     phylorefAsJSONLD.hasComponentClass = [];
 
+    // The type of this phyloreference.
+    let calculatedPhylorefType;
+
     // The list of logical expressions generated for this phyloref.
     let logicalExpressions = [];
 
@@ -677,6 +731,8 @@ class PhylorefWrapper {
       // We can't handle phyloreferences without at least one internal specifier.
       phylorefAsJSONLD.malformedPhyloreference = 'No internal specifiers provided';
     } else if (externalSpecifiers.length > 0) {
+      calculatedPhylorefType = 'phyloref:PhyloreferenceUsingMaximumClade';
+
       // If the phyloreference has at least one external specifier, we
       // can provide a simplified expression for the internal specifier,
       // in the form:
@@ -701,6 +757,8 @@ class PhylorefWrapper {
         );
       }
     } else {
+      calculatedPhylorefType = 'phyloref:PhyloreferenceUsingMinimumClade';
+
       // We only have internal specifiers. We therefore need to use the algorithm in
       // PhylorefWrapper.createClassExpressionsForInternals() to create this expression.
       logicalExpressions = PhylorefWrapper.createClassExpressionsForInternals(
@@ -762,6 +820,15 @@ class PhylorefWrapper {
     }
     phylorefAsJSONLD.subClassOf.push('phyloref:Phyloreference');
 
+    // If the this Phyloref has a phylorefType that differs from the calculated
+    // phyloref type, throw an error.
+    if (has(phylorefAsJSONLD, 'phylorefType') && phylorefAsJSONLD.phylorefType !== calculatedPhylorefType) {
+      throw new Error(
+        `Phyloref ${this.label} has phylorefType set to '${phylorefAsJSONLD.phylorefType}', but it appears to be a '${calculatedPhylorefType}'.`
+      );
+    }
+    phylorefAsJSONLD.subClassOf.push(calculatedPhylorefType);
+
     return phylorefAsJSONLD;
   }
 }
diff --git a/src/wrappers/TaxonomicUnitWrapper.js b/src/wrappers/TaxonomicUnitWrapper.js
index 3c9566b0..bc64c097 100644
--- a/src/wrappers/TaxonomicUnitWrapper.js
+++ b/src/wrappers/TaxonomicUnitWrapper.js
@@ -235,6 +235,10 @@ class TaxonomicUnitWrapper {
       return new SpecimenWrapper(this.specimen).asOWLEquivClass;
     }
 
+    // Is this just a reference (i.e. { "@id": <URI> })? If so, return that
+    // unchanged.
+    if (has(this.tunit, '@id')) return this.tunit;
+
     // Nothing we can do, so just ignore it.
     return undefined;
   }
diff --git a/test/examples.js b/test/examples.js
index 837319ac..bd114d08 100644
--- a/test/examples.js
+++ b/test/examples.js
@@ -5,7 +5,7 @@
 const fs = require('fs');
 const path = require('path');
 
-const jsonld = require('jsonld');
+const JSONLD = require('jsonld');
 const chai = require('chai');
 const Ajv = require('ajv');
 
@@ -26,84 +26,83 @@ const REPLACE_EXISTING = false;
  */
 
 describe('PhyxWrapper', function () {
-  let brochu2003owl;
-  describe('convert brochu_2003.json to an OWL ontology', function () {
-    const jsonFilename = path.resolve(__dirname, './examples/correct/brochu_2003.json');
-    const jsonldFilename = path.resolve(__dirname, './examples/correct/brochu_2003.jsonld');
+  const ajv = new Ajv({
+    allErrors: true, // Display all error messages, not just the first.
+  });
+  const validator = ajv.compile(
+    JSON.parse(
+      fs.readFileSync(
+        path.resolve(__dirname, '../docs/context/development/schema.json')
+      )
+    )
+  );
 
-    let brochu2003;
+  describe('Test all example Phyx files', function () {
+    const examples = fs.readdirSync(path.resolve(__dirname, './examples/correct'))
+      .filter(filename => filename.endsWith('.json'));
+
+    examples.forEach((example) => {
+      const basename = path.resolve(__dirname, './examples/correct', path.parse(example).name);
+      const jsonFilename = `${basename}.json`;
+      const jsonldFilename = `${basename}.jsonld`;
+      const nqFilename = `${basename}.nq`;
+
+      let json;
+      let jsonld;
+      let nq;
+
+      describe(`Test file '${example}'`, function () {
+        it('should be loadable', function () {
+          json = JSON.parse(fs.readFileSync(jsonFilename));
+          expect(json).to.be.an('object');
+        });
 
-    it('should be able to load brochu_2003.json', function () {
-      brochu2003 = JSON.parse(fs.readFileSync(jsonFilename));
-      expect(brochu2003).to.be.an('object');
-    });
+        it('should validate against our JSON schema', function () {
+          const valid = validator(json);
+          expect(
+            validator.errors,
+            `The following validation errors were generated: ${JSON.stringify(validator.errors, null, 2)}`
+          ).to.be.null;
+          expect(valid).to.be.true;
+        });
 
-    it('should be able to convert brochu_2003.json to an OWL Ontology', function () {
-      this.timeout(10000);
-      brochu2003owl = new phyx.PhyxWrapper(brochu2003).asOWLOntology('http://example.org/brochu_2003.json#');
-      if (REPLACE_EXISTING) {
-        fs.writeFileSync(
-          jsonldFilename,
-          JSON.stringify(brochu2003owl, null, 2)
-        );
-      }
-      expect(brochu2003owl).to.be.an('object');
-    });
+        it('should be able to convertible to an OWL Ontology', function () {
+          this.timeout(10000);
+          jsonld = new phyx.PhyxWrapper(json)
+            .asOWLOntology('http://example.org/phyx.js/example#');
+          if (REPLACE_EXISTING) {
+            fs.writeFileSync(
+              jsonldFilename,
+              JSON.stringify(jsonld, null, 2)
+            );
+          }
+          expect(jsonld).to.be.an('object');
+        });
 
-    it('should generate the same OWL ontology as it generated earlier', function () {
-      const expectedBrochu2003 = JSON.parse(fs.readFileSync(jsonldFilename));
-      expect(brochu2003owl).to.be.deep.equal(expectedBrochu2003);
-    });
-  });
-  describe('convert brochu_2003.jsonld to n-quads', function () {
-    const nqFilename = path.resolve(__dirname, './examples/correct/brochu_2003.nq');
-
-    let brochu2003nq;
-    it('should be able to convert brochu_2003.json via JSON-LD to n-quads', function () {
-      this.timeout(10000);
-
-      // JSON-LD readers don't usually handle relative @context easily, so
-      // instead let's replace the entire @context with the local context file.
-      brochu2003owl['@context'] = JSON.parse(fs.readFileSync(
-        path.resolve(__dirname, path.join('examples', 'correct', brochu2003owl['@context']))
-      ));
-
-      return jsonld.toRDF(brochu2003owl, { format: 'application/n-quads' }).then((rdf) => {
-        brochu2003nq = rdf;
-        if (REPLACE_EXISTING) fs.writeFileSync(nqFilename, brochu2003nq);
-        expect(brochu2003nq).to.be.a('string');
-      });
-    });
+        it('should generate the same OWL ontology as it generated earlier', function () {
+          const expectedJSONLD = JSON.parse(fs.readFileSync(jsonldFilename));
+          expect(jsonld).to.deep.equal(expectedJSONLD);
+        });
 
-    it('should generate the same n-quads ontology as it generated earlier', function () {
-      const expectedBrochu2003nq = fs.readFileSync(nqFilename).toString();
-      expect(brochu2003nq).to.be.deep.equal(expectedBrochu2003nq);
-    });
-  });
+        it('should be convertible to n-quads', function () {
+          this.timeout(10000);
 
-  describe('Test all example Phyx files', function () {
-    const examples = fs.readdirSync(path.resolve(__dirname, './examples'));
-    const jsonlds = examples.filter(filename => filename.toLowerCase().endsWith('.json'));
-    const ajv = new Ajv();
-    const validator = ajv.compile(
-      JSON.parse(
-        fs.readFileSync(
-          path.resolve(__dirname, '../docs/context/development/schema.json')
-        )
-      )
-    );
+          // JSON-LD readers don't usually handle relative @context easily, so
+          // instead let's replace the entire @context with the local context file.
+          jsonld['@context'] = JSON.parse(fs.readFileSync(
+            path.resolve(__dirname, 'examples', 'correct', jsonld['@context'])
+          ));
 
-    jsonlds.forEach((filename) => {
-      describe(`Example file ${filename}`, function () {
-        it('should validate against our JSON schema', function () {
-          const phyxContent = JSON.parse(
-            fs.readFileSync(
-              path.resolve(__dirname, `./examples/correct/${filename}`)
-            )
-          );
-          const valid = validator(phyxContent);
-          expect(validator.errors).to.be.null;
-          expect(valid).to.be.true;
+          return JSONLD.toRDF(jsonld, { format: 'application/n-quads' }).then((rdf) => {
+            nq = rdf;
+            if (REPLACE_EXISTING) fs.writeFileSync(nqFilename, nq);
+            expect(nq).to.be.a('string');
+          });
+        });
+
+        it('should generate the same n-quads ontology as it generated earlier', function () {
+          const expectedNQ = fs.readFileSync(nqFilename).toString();
+          expect(nq).to.deep.equal(expectedNQ);
         });
       });
     });
diff --git a/test/examples/correct/brochu_2003.json b/test/examples/correct/brochu_2003.json
index 1396e289..a2862cb4 100644
--- a/test/examples/correct/brochu_2003.json
+++ b/test/examples/correct/brochu_2003.json
@@ -10,7 +10,8 @@
     "phylorefs": [
         {
             "label": "Alligatoridae",
-            "cladeDefinition": "Alligatoridae (Cuvier 1807).\n\nLast common ancestor of Alligator mississippiensis and Caiman crocodilus and all of its descendents.",
+            "phylorefType": "phyloref:PhyloreferenceUsingMinimumClade",
+            "definition": "Alligatoridae (Cuvier 1807).\n\nLast common ancestor of Alligator mississippiensis and Caiman crocodilus and all of its descendents.",
             "definitionSource": {
               "type": "article",
               "title": "Phylogenetic approaches toward crocodylian history",
@@ -86,7 +87,8 @@
         },
         {
             "label": "Alligatorinae",
-            "cladeDefinition": "Alligatorinae (Kälin 1940).\n\nAlligator mississippiensis and all crocodylians closer to it than to Caiman crocodilus.",
+            "phylorefType": "phyloref:PhyloreferenceUsingMaximumClade",
+            "definition": "Alligatorinae (Kälin 1940).\n\nAlligator mississippiensis and all crocodylians closer to it than to Caiman crocodilus.",
             "definitionSource": {
               "type": "article",
               "title": "Phylogenetic approaches toward crocodylian history",
@@ -168,7 +170,8 @@
         },
         {
             "label": "Caimaninae",
-            "cladeDefinition": "Caimaninae (Norell 1988).\n\nCaiman crocodilus and all crocodylians closer to it than to Alligator mississippiensis.",
+            "phylorefType": "phyloref:PhyloreferenceUsingMaximumClade",
+            "definition": "Caimaninae (Norell 1988).\n\nCaiman crocodilus and all crocodylians closer to it than to Alligator mississippiensis.",
             "definitionSource": {
               "type": "article",
               "title": "Phylogenetic approaches toward crocodylian history",
@@ -249,7 +252,8 @@
         },
         {
             "label": "Crocodyloidea",
-            "cladeDefinition": "Crocodyloidea (Fitzinger 1826).\n\nCrocodylus niloticus and all crocodylians closer to it than to Alligator mississippiensis or Gavialis gangeticus.",
+            "phylorefType": "phyloref:PhyloreferenceUsingMaximumClade",
+            "definition": "Crocodyloidea (Fitzinger 1826).\n\nCrocodylus niloticus and all crocodylians closer to it than to Alligator mississippiensis or Gavialis gangeticus.",
             "internalSpecifiers": [
                 {
                     "@type": "http://rs.tdwg.org/ontology/voc/TaxonConcept#TaxonConcept",
@@ -308,7 +312,8 @@
         },
         {
             "label": "Crocodylidae",
-            "cladeDefinition": "Crocodylidae (Cuvier 1807). Definition dependent on phylogenetic context.\n\nLast common ancestor of Crocodylus niloticus, Osteolaemus tetraspis, and Tomistoma schlegelii and all of its descendents.",
+            "phylorefType": "phyloref:PhyloreferenceUsingMinimumClade",
+            "definition": "Crocodylidae (Cuvier 1807). Definition dependent on phylogenetic context.\n\nLast common ancestor of Crocodylus niloticus, Osteolaemus tetraspis, and Tomistoma schlegelii and all of its descendents.",
             "definitionSource": {
               "type": "article",
               "title": "Phylogenetic approaches toward crocodylian history",
@@ -396,7 +401,8 @@
         },
         {
             "label": "Diplocynodontinae",
-            "cladeDefinition": "Diplocynodontinae (Brochu 1999).\n\nDiplocynodon ratelii and all crocodylians closer to it than to Alligator mississippiensis.",
+            "phylorefType": "phyloref:PhyloreferenceUsingMaximumClade",
+            "definition": "Diplocynodontinae (Brochu 1999).\n\nDiplocynodon ratelii and all crocodylians closer to it than to Alligator mississippiensis.",
             "definitionSource": {
               "type": "article",
               "title": "Phylogenetic approaches toward crocodylian history",
diff --git a/test/examples/correct/brochu_2003.jsonld b/test/examples/correct/brochu_2003.jsonld
index 12029625..7714b192 100644
--- a/test/examples/correct/brochu_2003.jsonld
+++ b/test/examples/correct/brochu_2003.jsonld
@@ -4,11 +4,11 @@
     {
       "newick": "(Parasuchia,(rauisuchians,Aetosauria,(sphenosuchians,(protosuchians,(mesosuchians,(Hylaeochampsa,Aegyptosuchus,Stomatosuchus,(Allodaposuchus,('Gavialis gangeticus',(('Diplocynodon ratelii',('Alligator mississippiensis','Caiman crocodilus')Alligatoridae)Alligatoroidea,('Tomistoma schlegelii',('Osteolaemus tetraspis','Crocodylus niloticus')Crocodylinae)Crocodylidae)Brevirostres)Crocodylia))Eusuchia)Mesoeucrocodylia)Crocodyliformes)Crocodylomorpha))root;",
       "label": "Fig 1 from Brochu 2003",
-      "@id": "http://example.org/brochu_2003.json#phylogeny0",
+      "@id": "http://example.org/phyx.js/example#phylogeny0",
       "@type": "testcase:PhyloreferenceTestPhylogeny",
       "nodes": [
         {
-          "@id": "http://example.org/brochu_2003.json#phylogeny0_node0",
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node0",
           "rdf:type": [
             {
               "@id": "obo:CDAO_0000140"
@@ -19,29 +19,29 @@
           ],
           "representsTaxonomicUnits": [],
           "children": [
-            "http://example.org/brochu_2003.json#phylogeny0_node1",
-            "http://example.org/brochu_2003.json#phylogeny0_node29"
+            "http://example.org/phyx.js/example#phylogeny0_node1",
+            "http://example.org/phyx.js/example#phylogeny0_node29"
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phylogeny0_node1",
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node1",
           "rdf:type": [
             {
               "@id": "obo:CDAO_0000140"
             }
           ],
-          "parent": "http://example.org/brochu_2003.json#phylogeny0_node0",
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node0",
           "siblings": [
-            "http://example.org/brochu_2003.json#phylogeny0_node29"
+            "http://example.org/phyx.js/example#phylogeny0_node29"
           ],
           "children": [
-            "http://example.org/brochu_2003.json#phylogeny0_node2",
-            "http://example.org/brochu_2003.json#phylogeny0_node27",
-            "http://example.org/brochu_2003.json#phylogeny0_node28"
+            "http://example.org/phyx.js/example#phylogeny0_node2",
+            "http://example.org/phyx.js/example#phylogeny0_node27",
+            "http://example.org/phyx.js/example#phylogeny0_node28"
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phylogeny0_node2",
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node2",
           "rdf:type": [
             {
               "@id": "obo:CDAO_0000140"
@@ -76,18 +76,18 @@
               "label": "Crocodylomorpha"
             }
           ],
-          "parent": "http://example.org/brochu_2003.json#phylogeny0_node1",
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node1",
           "siblings": [
-            "http://example.org/brochu_2003.json#phylogeny0_node27",
-            "http://example.org/brochu_2003.json#phylogeny0_node28"
+            "http://example.org/phyx.js/example#phylogeny0_node27",
+            "http://example.org/phyx.js/example#phylogeny0_node28"
           ],
           "children": [
-            "http://example.org/brochu_2003.json#phylogeny0_node3",
-            "http://example.org/brochu_2003.json#phylogeny0_node26"
+            "http://example.org/phyx.js/example#phylogeny0_node3",
+            "http://example.org/phyx.js/example#phylogeny0_node26"
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phylogeny0_node3",
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node3",
           "rdf:type": [
             {
               "@id": "obo:CDAO_0000140"
@@ -122,17 +122,17 @@
               "label": "Crocodyliformes"
             }
           ],
-          "parent": "http://example.org/brochu_2003.json#phylogeny0_node2",
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node2",
           "siblings": [
-            "http://example.org/brochu_2003.json#phylogeny0_node26"
+            "http://example.org/phyx.js/example#phylogeny0_node26"
           ],
           "children": [
-            "http://example.org/brochu_2003.json#phylogeny0_node4",
-            "http://example.org/brochu_2003.json#phylogeny0_node25"
+            "http://example.org/phyx.js/example#phylogeny0_node4",
+            "http://example.org/phyx.js/example#phylogeny0_node25"
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phylogeny0_node4",
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node4",
           "rdf:type": [
             {
               "@id": "obo:CDAO_0000140"
@@ -167,17 +167,17 @@
               "label": "Mesoeucrocodylia"
             }
           ],
-          "parent": "http://example.org/brochu_2003.json#phylogeny0_node3",
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node3",
           "siblings": [
-            "http://example.org/brochu_2003.json#phylogeny0_node25"
+            "http://example.org/phyx.js/example#phylogeny0_node25"
           ],
           "children": [
-            "http://example.org/brochu_2003.json#phylogeny0_node5",
-            "http://example.org/brochu_2003.json#phylogeny0_node24"
+            "http://example.org/phyx.js/example#phylogeny0_node5",
+            "http://example.org/phyx.js/example#phylogeny0_node24"
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phylogeny0_node5",
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node5",
           "rdf:type": [
             {
               "@id": "obo:CDAO_0000140"
@@ -212,37 +212,37 @@
               "label": "Eusuchia"
             }
           ],
-          "parent": "http://example.org/brochu_2003.json#phylogeny0_node4",
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node4",
           "siblings": [
-            "http://example.org/brochu_2003.json#phylogeny0_node24"
+            "http://example.org/phyx.js/example#phylogeny0_node24"
           ],
           "children": [
-            "http://example.org/brochu_2003.json#phylogeny0_node6",
-            "http://example.org/brochu_2003.json#phylogeny0_node21",
-            "http://example.org/brochu_2003.json#phylogeny0_node22",
-            "http://example.org/brochu_2003.json#phylogeny0_node23"
+            "http://example.org/phyx.js/example#phylogeny0_node6",
+            "http://example.org/phyx.js/example#phylogeny0_node21",
+            "http://example.org/phyx.js/example#phylogeny0_node22",
+            "http://example.org/phyx.js/example#phylogeny0_node23"
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phylogeny0_node6",
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node6",
           "rdf:type": [
             {
               "@id": "obo:CDAO_0000140"
             }
           ],
-          "parent": "http://example.org/brochu_2003.json#phylogeny0_node5",
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node5",
           "siblings": [
-            "http://example.org/brochu_2003.json#phylogeny0_node21",
-            "http://example.org/brochu_2003.json#phylogeny0_node22",
-            "http://example.org/brochu_2003.json#phylogeny0_node23"
+            "http://example.org/phyx.js/example#phylogeny0_node21",
+            "http://example.org/phyx.js/example#phylogeny0_node22",
+            "http://example.org/phyx.js/example#phylogeny0_node23"
           ],
           "children": [
-            "http://example.org/brochu_2003.json#phylogeny0_node7",
-            "http://example.org/brochu_2003.json#phylogeny0_node20"
+            "http://example.org/phyx.js/example#phylogeny0_node7",
+            "http://example.org/phyx.js/example#phylogeny0_node20"
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phylogeny0_node7",
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node7",
           "rdf:type": [
             {
               "@id": "obo:CDAO_0000140"
@@ -277,17 +277,17 @@
               "label": "Crocodylia"
             }
           ],
-          "parent": "http://example.org/brochu_2003.json#phylogeny0_node6",
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node6",
           "siblings": [
-            "http://example.org/brochu_2003.json#phylogeny0_node20"
+            "http://example.org/phyx.js/example#phylogeny0_node20"
           ],
           "children": [
-            "http://example.org/brochu_2003.json#phylogeny0_node8",
-            "http://example.org/brochu_2003.json#phylogeny0_node19"
+            "http://example.org/phyx.js/example#phylogeny0_node8",
+            "http://example.org/phyx.js/example#phylogeny0_node19"
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phylogeny0_node8",
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node8",
           "rdf:type": [
             {
               "@id": "obo:CDAO_0000140"
@@ -322,17 +322,17 @@
               "label": "Brevirostres"
             }
           ],
-          "parent": "http://example.org/brochu_2003.json#phylogeny0_node7",
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node7",
           "siblings": [
-            "http://example.org/brochu_2003.json#phylogeny0_node19"
+            "http://example.org/phyx.js/example#phylogeny0_node19"
           ],
           "children": [
-            "http://example.org/brochu_2003.json#phylogeny0_node9",
-            "http://example.org/brochu_2003.json#phylogeny0_node14"
+            "http://example.org/phyx.js/example#phylogeny0_node9",
+            "http://example.org/phyx.js/example#phylogeny0_node14"
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phylogeny0_node9",
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node9",
           "rdf:type": [
             {
               "@id": "obo:CDAO_0000140"
@@ -363,7 +363,7 @@
                     "@type": "owl:Restriction",
                     "onProperty": "obo:OBI_0000293",
                     "someValuesFrom": {
-                      "@id": "http://example.org/brochu_2003.json#phyloref3"
+                      "@id": "http://example.org/phyx.js/example#phyloref3"
                     }
                   }
                 ]
@@ -382,7 +382,7 @@
                     "@type": "owl:Restriction",
                     "onProperty": "obo:OBI_0000293",
                     "someValuesFrom": {
-                      "@id": "http://example.org/brochu_2003.json#phyloref4"
+                      "@id": "http://example.org/phyx.js/example#phyloref4"
                     }
                   }
                 ]
@@ -405,17 +405,17 @@
               "label": "Crocodylidae"
             }
           ],
-          "parent": "http://example.org/brochu_2003.json#phylogeny0_node8",
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node8",
           "siblings": [
-            "http://example.org/brochu_2003.json#phylogeny0_node14"
+            "http://example.org/phyx.js/example#phylogeny0_node14"
           ],
           "children": [
-            "http://example.org/brochu_2003.json#phylogeny0_node10",
-            "http://example.org/brochu_2003.json#phylogeny0_node13"
+            "http://example.org/phyx.js/example#phylogeny0_node10",
+            "http://example.org/phyx.js/example#phylogeny0_node13"
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phylogeny0_node10",
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node10",
           "rdf:type": [
             {
               "@id": "obo:CDAO_0000140"
@@ -450,17 +450,17 @@
               "label": "Crocodylinae"
             }
           ],
-          "parent": "http://example.org/brochu_2003.json#phylogeny0_node9",
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node9",
           "siblings": [
-            "http://example.org/brochu_2003.json#phylogeny0_node13"
+            "http://example.org/phyx.js/example#phylogeny0_node13"
           ],
           "children": [
-            "http://example.org/brochu_2003.json#phylogeny0_node11",
-            "http://example.org/brochu_2003.json#phylogeny0_node12"
+            "http://example.org/phyx.js/example#phylogeny0_node11",
+            "http://example.org/phyx.js/example#phylogeny0_node12"
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phylogeny0_node11",
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node11",
           "rdf:type": [
             {
               "@id": "obo:CDAO_0000140"
@@ -496,13 +496,13 @@
               "label": "Crocodylus niloticus"
             }
           ],
-          "parent": "http://example.org/brochu_2003.json#phylogeny0_node10",
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node10",
           "siblings": [
-            "http://example.org/brochu_2003.json#phylogeny0_node12"
+            "http://example.org/phyx.js/example#phylogeny0_node12"
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phylogeny0_node12",
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node12",
           "rdf:type": [
             {
               "@id": "obo:CDAO_0000140"
@@ -538,13 +538,13 @@
               "label": "Osteolaemus tetraspis"
             }
           ],
-          "parent": "http://example.org/brochu_2003.json#phylogeny0_node10",
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node10",
           "siblings": [
-            "http://example.org/brochu_2003.json#phylogeny0_node11"
+            "http://example.org/phyx.js/example#phylogeny0_node11"
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phylogeny0_node13",
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node13",
           "rdf:type": [
             {
               "@id": "obo:CDAO_0000140"
@@ -580,13 +580,13 @@
               "label": "Tomistoma schlegelii"
             }
           ],
-          "parent": "http://example.org/brochu_2003.json#phylogeny0_node9",
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node9",
           "siblings": [
-            "http://example.org/brochu_2003.json#phylogeny0_node10"
+            "http://example.org/phyx.js/example#phylogeny0_node10"
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phylogeny0_node14",
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node14",
           "rdf:type": [
             {
               "@id": "obo:CDAO_0000140"
@@ -621,17 +621,17 @@
               "label": "Alligatoroidea"
             }
           ],
-          "parent": "http://example.org/brochu_2003.json#phylogeny0_node8",
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node8",
           "siblings": [
-            "http://example.org/brochu_2003.json#phylogeny0_node9"
+            "http://example.org/phyx.js/example#phylogeny0_node9"
           ],
           "children": [
-            "http://example.org/brochu_2003.json#phylogeny0_node15",
-            "http://example.org/brochu_2003.json#phylogeny0_node18"
+            "http://example.org/phyx.js/example#phylogeny0_node15",
+            "http://example.org/phyx.js/example#phylogeny0_node18"
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phylogeny0_node15",
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node15",
           "rdf:type": [
             {
               "@id": "obo:CDAO_0000140"
@@ -662,7 +662,7 @@
                     "@type": "owl:Restriction",
                     "onProperty": "obo:OBI_0000293",
                     "someValuesFrom": {
-                      "@id": "http://example.org/brochu_2003.json#phyloref0"
+                      "@id": "http://example.org/phyx.js/example#phyloref0"
                     }
                   }
                 ]
@@ -685,17 +685,17 @@
               "label": "Alligatoridae"
             }
           ],
-          "parent": "http://example.org/brochu_2003.json#phylogeny0_node14",
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node14",
           "siblings": [
-            "http://example.org/brochu_2003.json#phylogeny0_node18"
+            "http://example.org/phyx.js/example#phylogeny0_node18"
           ],
           "children": [
-            "http://example.org/brochu_2003.json#phylogeny0_node16",
-            "http://example.org/brochu_2003.json#phylogeny0_node17"
+            "http://example.org/phyx.js/example#phylogeny0_node16",
+            "http://example.org/phyx.js/example#phylogeny0_node17"
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phylogeny0_node16",
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node16",
           "rdf:type": [
             {
               "@id": "obo:CDAO_0000140"
@@ -726,7 +726,7 @@
                     "@type": "owl:Restriction",
                     "onProperty": "obo:OBI_0000293",
                     "someValuesFrom": {
-                      "@id": "http://example.org/brochu_2003.json#phyloref2"
+                      "@id": "http://example.org/phyx.js/example#phyloref2"
                     }
                   }
                 ]
@@ -750,13 +750,13 @@
               "label": "Caiman crocodilus"
             }
           ],
-          "parent": "http://example.org/brochu_2003.json#phylogeny0_node15",
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node15",
           "siblings": [
-            "http://example.org/brochu_2003.json#phylogeny0_node17"
+            "http://example.org/phyx.js/example#phylogeny0_node17"
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phylogeny0_node17",
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node17",
           "rdf:type": [
             {
               "@id": "obo:CDAO_0000140"
@@ -787,7 +787,7 @@
                     "@type": "owl:Restriction",
                     "onProperty": "obo:OBI_0000293",
                     "someValuesFrom": {
-                      "@id": "http://example.org/brochu_2003.json#phyloref1"
+                      "@id": "http://example.org/phyx.js/example#phyloref1"
                     }
                   }
                 ]
@@ -811,13 +811,13 @@
               "label": "Alligator mississippiensis"
             }
           ],
-          "parent": "http://example.org/brochu_2003.json#phylogeny0_node15",
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node15",
           "siblings": [
-            "http://example.org/brochu_2003.json#phylogeny0_node16"
+            "http://example.org/phyx.js/example#phylogeny0_node16"
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phylogeny0_node18",
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node18",
           "rdf:type": [
             {
               "@id": "obo:CDAO_0000140"
@@ -848,7 +848,7 @@
                     "@type": "owl:Restriction",
                     "onProperty": "obo:OBI_0000293",
                     "someValuesFrom": {
-                      "@id": "http://example.org/brochu_2003.json#phyloref5"
+                      "@id": "http://example.org/phyx.js/example#phyloref5"
                     }
                   }
                 ]
@@ -872,13 +872,13 @@
               "label": "Diplocynodon ratelii"
             }
           ],
-          "parent": "http://example.org/brochu_2003.json#phylogeny0_node14",
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node14",
           "siblings": [
-            "http://example.org/brochu_2003.json#phylogeny0_node15"
+            "http://example.org/phyx.js/example#phylogeny0_node15"
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phylogeny0_node19",
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node19",
           "rdf:type": [
             {
               "@id": "obo:CDAO_0000140"
@@ -914,13 +914,13 @@
               "label": "Gavialis gangeticus"
             }
           ],
-          "parent": "http://example.org/brochu_2003.json#phylogeny0_node7",
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node7",
           "siblings": [
-            "http://example.org/brochu_2003.json#phylogeny0_node8"
+            "http://example.org/phyx.js/example#phylogeny0_node8"
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phylogeny0_node20",
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node20",
           "rdf:type": [
             {
               "@id": "obo:CDAO_0000140"
@@ -955,13 +955,13 @@
               "label": "Allodaposuchus"
             }
           ],
-          "parent": "http://example.org/brochu_2003.json#phylogeny0_node6",
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node6",
           "siblings": [
-            "http://example.org/brochu_2003.json#phylogeny0_node7"
+            "http://example.org/phyx.js/example#phylogeny0_node7"
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phylogeny0_node21",
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node21",
           "rdf:type": [
             {
               "@id": "obo:CDAO_0000140"
@@ -996,15 +996,15 @@
               "label": "Stomatosuchus"
             }
           ],
-          "parent": "http://example.org/brochu_2003.json#phylogeny0_node5",
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node5",
           "siblings": [
-            "http://example.org/brochu_2003.json#phylogeny0_node6",
-            "http://example.org/brochu_2003.json#phylogeny0_node22",
-            "http://example.org/brochu_2003.json#phylogeny0_node23"
+            "http://example.org/phyx.js/example#phylogeny0_node6",
+            "http://example.org/phyx.js/example#phylogeny0_node22",
+            "http://example.org/phyx.js/example#phylogeny0_node23"
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phylogeny0_node22",
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node22",
           "rdf:type": [
             {
               "@id": "obo:CDAO_0000140"
@@ -1039,15 +1039,15 @@
               "label": "Aegyptosuchus"
             }
           ],
-          "parent": "http://example.org/brochu_2003.json#phylogeny0_node5",
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node5",
           "siblings": [
-            "http://example.org/brochu_2003.json#phylogeny0_node6",
-            "http://example.org/brochu_2003.json#phylogeny0_node21",
-            "http://example.org/brochu_2003.json#phylogeny0_node23"
+            "http://example.org/phyx.js/example#phylogeny0_node6",
+            "http://example.org/phyx.js/example#phylogeny0_node21",
+            "http://example.org/phyx.js/example#phylogeny0_node23"
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phylogeny0_node23",
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node23",
           "rdf:type": [
             {
               "@id": "obo:CDAO_0000140"
@@ -1082,15 +1082,15 @@
               "label": "Hylaeochampsa"
             }
           ],
-          "parent": "http://example.org/brochu_2003.json#phylogeny0_node5",
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node5",
           "siblings": [
-            "http://example.org/brochu_2003.json#phylogeny0_node6",
-            "http://example.org/brochu_2003.json#phylogeny0_node21",
-            "http://example.org/brochu_2003.json#phylogeny0_node22"
+            "http://example.org/phyx.js/example#phylogeny0_node6",
+            "http://example.org/phyx.js/example#phylogeny0_node21",
+            "http://example.org/phyx.js/example#phylogeny0_node22"
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phylogeny0_node24",
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node24",
           "rdf:type": [
             {
               "@id": "obo:CDAO_0000140"
@@ -1100,13 +1100,13 @@
             "mesosuchians"
           ],
           "representsTaxonomicUnits": [],
-          "parent": "http://example.org/brochu_2003.json#phylogeny0_node4",
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node4",
           "siblings": [
-            "http://example.org/brochu_2003.json#phylogeny0_node5"
+            "http://example.org/phyx.js/example#phylogeny0_node5"
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phylogeny0_node25",
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node25",
           "rdf:type": [
             {
               "@id": "obo:CDAO_0000140"
@@ -1116,13 +1116,13 @@
             "protosuchians"
           ],
           "representsTaxonomicUnits": [],
-          "parent": "http://example.org/brochu_2003.json#phylogeny0_node3",
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node3",
           "siblings": [
-            "http://example.org/brochu_2003.json#phylogeny0_node4"
+            "http://example.org/phyx.js/example#phylogeny0_node4"
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phylogeny0_node26",
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node26",
           "rdf:type": [
             {
               "@id": "obo:CDAO_0000140"
@@ -1132,13 +1132,13 @@
             "sphenosuchians"
           ],
           "representsTaxonomicUnits": [],
-          "parent": "http://example.org/brochu_2003.json#phylogeny0_node2",
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node2",
           "siblings": [
-            "http://example.org/brochu_2003.json#phylogeny0_node3"
+            "http://example.org/phyx.js/example#phylogeny0_node3"
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phylogeny0_node27",
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node27",
           "rdf:type": [
             {
               "@id": "obo:CDAO_0000140"
@@ -1173,14 +1173,14 @@
               "label": "Aetosauria"
             }
           ],
-          "parent": "http://example.org/brochu_2003.json#phylogeny0_node1",
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node1",
           "siblings": [
-            "http://example.org/brochu_2003.json#phylogeny0_node2",
-            "http://example.org/brochu_2003.json#phylogeny0_node28"
+            "http://example.org/phyx.js/example#phylogeny0_node2",
+            "http://example.org/phyx.js/example#phylogeny0_node28"
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phylogeny0_node28",
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node28",
           "rdf:type": [
             {
               "@id": "obo:CDAO_0000140"
@@ -1190,14 +1190,14 @@
             "rauisuchians"
           ],
           "representsTaxonomicUnits": [],
-          "parent": "http://example.org/brochu_2003.json#phylogeny0_node1",
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node1",
           "siblings": [
-            "http://example.org/brochu_2003.json#phylogeny0_node2",
-            "http://example.org/brochu_2003.json#phylogeny0_node27"
+            "http://example.org/phyx.js/example#phylogeny0_node2",
+            "http://example.org/phyx.js/example#phylogeny0_node27"
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phylogeny0_node29",
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node29",
           "rdf:type": [
             {
               "@id": "obo:CDAO_0000140"
@@ -1232,21 +1232,22 @@
               "label": "Parasuchia"
             }
           ],
-          "parent": "http://example.org/brochu_2003.json#phylogeny0_node0",
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node0",
           "siblings": [
-            "http://example.org/brochu_2003.json#phylogeny0_node1"
+            "http://example.org/phyx.js/example#phylogeny0_node1"
           ]
         }
       ],
       "hasRootNode": {
-        "@id": "http://example.org/brochu_2003.json#phylogeny0_node0"
+        "@id": "http://example.org/phyx.js/example#phylogeny0_node0"
       }
     }
   ],
   "phylorefs": [
     {
       "label": "Alligatoridae",
-      "cladeDefinition": "Alligatoridae (Cuvier 1807).\n\nLast common ancestor of Alligator mississippiensis and Caiman crocodilus and all of its descendents.",
+      "phylorefType": "phyloref:PhyloreferenceUsingMinimumClade",
+      "definition": "Alligatoridae (Cuvier 1807).\n\nLast common ancestor of Alligator mississippiensis and Caiman crocodilus and all of its descendents.",
       "definitionSource": {
         "type": "article",
         "title": "Phylogenetic approaches toward crocodylian history",
@@ -1323,7 +1324,7 @@
           }
         }
       ],
-      "@id": "http://example.org/brochu_2003.json#phyloref0",
+      "@id": "http://example.org/phyx.js/example#phyloref0",
       "@type": "owl:Class",
       "hasComponentClass": [],
       "equivalentClass": {
@@ -1362,12 +1363,14 @@
         }
       },
       "subClassOf": [
-        "phyloref:Phyloreference"
+        "phyloref:Phyloreference",
+        "phyloref:PhyloreferenceUsingMinimumClade"
       ]
     },
     {
       "label": "Alligatorinae",
-      "cladeDefinition": "Alligatorinae (Kälin 1940).\n\nAlligator mississippiensis and all crocodylians closer to it than to Caiman crocodilus.",
+      "phylorefType": "phyloref:PhyloreferenceUsingMaximumClade",
+      "definition": "Alligatorinae (Kälin 1940).\n\nAlligator mississippiensis and all crocodylians closer to it than to Caiman crocodilus.",
       "definitionSource": {
         "type": "article",
         "title": "Phylogenetic approaches toward crocodylian history",
@@ -1450,7 +1453,7 @@
           "nodeLabel": "Alligator mississippiensis"
         }
       },
-      "@id": "http://example.org/brochu_2003.json#phyloref1",
+      "@id": "http://example.org/phyx.js/example#phyloref1",
       "@type": "owl:Class",
       "hasComponentClass": [],
       "equivalentClass": {
@@ -1485,12 +1488,14 @@
         ]
       },
       "subClassOf": [
-        "phyloref:Phyloreference"
+        "phyloref:Phyloreference",
+        "phyloref:PhyloreferenceUsingMaximumClade"
       ]
     },
     {
       "label": "Caimaninae",
-      "cladeDefinition": "Caimaninae (Norell 1988).\n\nCaiman crocodilus and all crocodylians closer to it than to Alligator mississippiensis.",
+      "phylorefType": "phyloref:PhyloreferenceUsingMaximumClade",
+      "definition": "Caimaninae (Norell 1988).\n\nCaiman crocodilus and all crocodylians closer to it than to Alligator mississippiensis.",
       "definitionSource": {
         "type": "article",
         "title": "Phylogenetic approaches toward crocodylian history",
@@ -1572,7 +1577,7 @@
           "nodeLabel": "Caiman crocodilus"
         }
       },
-      "@id": "http://example.org/brochu_2003.json#phyloref2",
+      "@id": "http://example.org/phyx.js/example#phyloref2",
       "@type": "owl:Class",
       "hasComponentClass": [],
       "equivalentClass": {
@@ -1607,12 +1612,14 @@
         ]
       },
       "subClassOf": [
-        "phyloref:Phyloreference"
+        "phyloref:Phyloreference",
+        "phyloref:PhyloreferenceUsingMaximumClade"
       ]
     },
     {
       "label": "Crocodyloidea",
-      "cladeDefinition": "Crocodyloidea (Fitzinger 1826).\n\nCrocodylus niloticus and all crocodylians closer to it than to Alligator mississippiensis or Gavialis gangeticus.",
+      "phylorefType": "phyloref:PhyloreferenceUsingMaximumClade",
+      "definition": "Crocodyloidea (Fitzinger 1826).\n\nCrocodylus niloticus and all crocodylians closer to it than to Alligator mississippiensis or Gavialis gangeticus.",
       "internalSpecifiers": [
         {
           "@type": "http://rs.tdwg.org/ontology/voc/TaxonConcept#TaxonConcept",
@@ -1668,11 +1675,11 @@
           "nodeLabel": "Crocodylidae"
         }
       },
-      "@id": "http://example.org/brochu_2003.json#phyloref3",
+      "@id": "http://example.org/phyx.js/example#phyloref3",
       "@type": "owl:Class",
       "hasComponentClass": [
         {
-          "@id": "http://example.org/brochu_2003.json#phyloref3_component1",
+          "@id": "http://example.org/phyx.js/example#phyloref3_component1",
           "@type": "owl:Class",
           "label": "(Crocodylus niloticus ~ Alligator mississippiensis)",
           "equivalentClass": [
@@ -1713,7 +1720,7 @@
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phyloref3_component2",
+          "@id": "http://example.org/phyx.js/example#phyloref3_component2",
           "@type": "owl:Class",
           "label": "(Crocodylus niloticus ~ Gavialis gangeticus)",
           "equivalentClass": [
@@ -1754,14 +1761,14 @@
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phyloref3_component3",
+          "@id": "http://example.org/phyx.js/example#phyloref3_component3",
           "@type": "owl:Class",
           "label": "(Crocodylus niloticus ~ Alligator mississippiensis V Gavialis gangeticus)",
           "equivalentClass": {
             "@type": "owl:Class",
             "intersectionOf": [
               {
-                "@id": "http://example.org/brochu_2003.json#phyloref3_component1"
+                "@id": "http://example.org/phyx.js/example#phyloref3_component1"
               },
               {
                 "@type": "owl:Restriction",
@@ -1781,19 +1788,19 @@
           "subClassOf": [
             "phyloref:PhyloreferenceUsingMaximumClade",
             {
-              "@id": "http://example.org/brochu_2003.json#phyloref3"
+              "@id": "http://example.org/phyx.js/example#phyloref3"
             }
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phyloref3_component4",
+          "@id": "http://example.org/phyx.js/example#phyloref3_component4",
           "@type": "owl:Class",
           "label": "(Crocodylus niloticus ~ Alligator mississippiensis V Gavialis gangeticus)",
           "equivalentClass": {
             "@type": "owl:Class",
             "intersectionOf": [
               {
-                "@id": "http://example.org/brochu_2003.json#phyloref3_component1"
+                "@id": "http://example.org/phyx.js/example#phyloref3_component1"
               },
               {
                 "@type": "owl:Restriction",
@@ -1817,19 +1824,19 @@
           "subClassOf": [
             "phyloref:PhyloreferenceUsingMaximumClade",
             {
-              "@id": "http://example.org/brochu_2003.json#phyloref3"
+              "@id": "http://example.org/phyx.js/example#phyloref3"
             }
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phyloref3_component5",
+          "@id": "http://example.org/phyx.js/example#phyloref3_component5",
           "@type": "owl:Class",
           "label": "(Crocodylus niloticus ~ Alligator mississippiensis V Gavialis gangeticus)",
           "equivalentClass": {
             "@type": "owl:Class",
             "intersectionOf": [
               {
-                "@id": "http://example.org/brochu_2003.json#phyloref3_component2"
+                "@id": "http://example.org/phyx.js/example#phyloref3_component2"
               },
               {
                 "@type": "owl:Restriction",
@@ -1849,19 +1856,19 @@
           "subClassOf": [
             "phyloref:PhyloreferenceUsingMaximumClade",
             {
-              "@id": "http://example.org/brochu_2003.json#phyloref3"
+              "@id": "http://example.org/phyx.js/example#phyloref3"
             }
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phyloref3_component6",
+          "@id": "http://example.org/phyx.js/example#phyloref3_component6",
           "@type": "owl:Class",
           "label": "(Crocodylus niloticus ~ Alligator mississippiensis V Gavialis gangeticus)",
           "equivalentClass": {
             "@type": "owl:Class",
             "intersectionOf": [
               {
-                "@id": "http://example.org/brochu_2003.json#phyloref3_component2"
+                "@id": "http://example.org/phyx.js/example#phyloref3_component2"
               },
               {
                 "@type": "owl:Restriction",
@@ -1885,18 +1892,20 @@
           "subClassOf": [
             "phyloref:PhyloreferenceUsingMaximumClade",
             {
-              "@id": "http://example.org/brochu_2003.json#phyloref3"
+              "@id": "http://example.org/phyx.js/example#phyloref3"
             }
           ]
         }
       ],
       "subClassOf": [
-        "phyloref:Phyloreference"
+        "phyloref:Phyloreference",
+        "phyloref:PhyloreferenceUsingMaximumClade"
       ]
     },
     {
       "label": "Crocodylidae",
-      "cladeDefinition": "Crocodylidae (Cuvier 1807). Definition dependent on phylogenetic context.\n\nLast common ancestor of Crocodylus niloticus, Osteolaemus tetraspis, and Tomistoma schlegelii and all of its descendents.",
+      "phylorefType": "phyloref:PhyloreferenceUsingMinimumClade",
+      "definition": "Crocodylidae (Cuvier 1807). Definition dependent on phylogenetic context.\n\nLast common ancestor of Crocodylus niloticus, Osteolaemus tetraspis, and Tomistoma schlegelii and all of its descendents.",
       "definitionSource": {
         "type": "article",
         "title": "Phylogenetic approaches toward crocodylian history",
@@ -1985,11 +1994,11 @@
           }
         }
       ],
-      "@id": "http://example.org/brochu_2003.json#phyloref4",
+      "@id": "http://example.org/phyx.js/example#phyloref4",
       "@type": "owl:Class",
       "hasComponentClass": [
         {
-          "@id": "http://example.org/brochu_2003.json#phyloref4_component1",
+          "@id": "http://example.org/phyx.js/example#phyloref4_component1",
           "@type": "owl:Class",
           "label": "(Crocodylus niloticus & Osteolaemus tetraspis & Tomistoma schlegelii)",
           "equivalentClass": {
@@ -2056,12 +2065,12 @@
           "subClassOf": [
             "phyloref:PhyloreferenceUsingMinimumClade",
             {
-              "@id": "http://example.org/brochu_2003.json#phyloref4"
+              "@id": "http://example.org/phyx.js/example#phyloref4"
             }
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phyloref4_component2",
+          "@id": "http://example.org/phyx.js/example#phyloref4_component2",
           "@type": "owl:Class",
           "label": "(Crocodylus niloticus & Osteolaemus tetraspis & Tomistoma schlegelii)",
           "equivalentClass": {
@@ -2128,12 +2137,12 @@
           "subClassOf": [
             "phyloref:PhyloreferenceUsingMinimumClade",
             {
-              "@id": "http://example.org/brochu_2003.json#phyloref4"
+              "@id": "http://example.org/phyx.js/example#phyloref4"
             }
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phyloref4_component3",
+          "@id": "http://example.org/phyx.js/example#phyloref4_component3",
           "@type": "owl:Class",
           "label": "(Crocodylus niloticus & Osteolaemus tetraspis & Tomistoma schlegelii)",
           "equivalentClass": {
@@ -2200,12 +2209,12 @@
           "subClassOf": [
             "phyloref:PhyloreferenceUsingMinimumClade",
             {
-              "@id": "http://example.org/brochu_2003.json#phyloref4"
+              "@id": "http://example.org/phyx.js/example#phyloref4"
             }
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phyloref4_component4",
+          "@id": "http://example.org/phyx.js/example#phyloref4_component4",
           "@type": "owl:Class",
           "label": "(Crocodylus niloticus & Osteolaemus tetraspis & Tomistoma schlegelii)",
           "equivalentClass": {
@@ -2272,12 +2281,12 @@
           "subClassOf": [
             "phyloref:PhyloreferenceUsingMinimumClade",
             {
-              "@id": "http://example.org/brochu_2003.json#phyloref4"
+              "@id": "http://example.org/phyx.js/example#phyloref4"
             }
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phyloref4_component5",
+          "@id": "http://example.org/phyx.js/example#phyloref4_component5",
           "@type": "owl:Class",
           "label": "(Crocodylus niloticus & Osteolaemus tetraspis & Tomistoma schlegelii)",
           "equivalentClass": {
@@ -2344,12 +2353,12 @@
           "subClassOf": [
             "phyloref:PhyloreferenceUsingMinimumClade",
             {
-              "@id": "http://example.org/brochu_2003.json#phyloref4"
+              "@id": "http://example.org/phyx.js/example#phyloref4"
             }
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phyloref4_component6",
+          "@id": "http://example.org/phyx.js/example#phyloref4_component6",
           "@type": "owl:Class",
           "label": "(Crocodylus niloticus & Osteolaemus tetraspis & Tomistoma schlegelii)",
           "equivalentClass": {
@@ -2416,12 +2425,12 @@
           "subClassOf": [
             "phyloref:PhyloreferenceUsingMinimumClade",
             {
-              "@id": "http://example.org/brochu_2003.json#phyloref4"
+              "@id": "http://example.org/phyx.js/example#phyloref4"
             }
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phyloref4_component7",
+          "@id": "http://example.org/phyx.js/example#phyloref4_component7",
           "@type": "owl:Class",
           "label": "(Crocodylus niloticus & Osteolaemus tetraspis & Tomistoma schlegelii)",
           "equivalentClass": {
@@ -2488,12 +2497,12 @@
           "subClassOf": [
             "phyloref:PhyloreferenceUsingMinimumClade",
             {
-              "@id": "http://example.org/brochu_2003.json#phyloref4"
+              "@id": "http://example.org/phyx.js/example#phyloref4"
             }
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phyloref4_component8",
+          "@id": "http://example.org/phyx.js/example#phyloref4_component8",
           "@type": "owl:Class",
           "label": "(Crocodylus niloticus & Osteolaemus tetraspis & Tomistoma schlegelii)",
           "equivalentClass": {
@@ -2560,12 +2569,12 @@
           "subClassOf": [
             "phyloref:PhyloreferenceUsingMinimumClade",
             {
-              "@id": "http://example.org/brochu_2003.json#phyloref4"
+              "@id": "http://example.org/phyx.js/example#phyloref4"
             }
           ]
         },
         {
-          "@id": "http://example.org/brochu_2003.json#phyloref4_component9",
+          "@id": "http://example.org/phyx.js/example#phyloref4_component9",
           "@type": "owl:Class",
           "label": "(Crocodylus niloticus & Osteolaemus tetraspis & Tomistoma schlegelii)",
           "equivalentClass": {
@@ -2632,18 +2641,20 @@
           "subClassOf": [
             "phyloref:PhyloreferenceUsingMinimumClade",
             {
-              "@id": "http://example.org/brochu_2003.json#phyloref4"
+              "@id": "http://example.org/phyx.js/example#phyloref4"
             }
           ]
         }
       ],
       "subClassOf": [
-        "phyloref:Phyloreference"
+        "phyloref:Phyloreference",
+        "phyloref:PhyloreferenceUsingMinimumClade"
       ]
     },
     {
       "label": "Diplocynodontinae",
-      "cladeDefinition": "Diplocynodontinae (Brochu 1999).\n\nDiplocynodon ratelii and all crocodylians closer to it than to Alligator mississippiensis.",
+      "phylorefType": "phyloref:PhyloreferenceUsingMaximumClade",
+      "definition": "Diplocynodontinae (Brochu 1999).\n\nDiplocynodon ratelii and all crocodylians closer to it than to Alligator mississippiensis.",
       "definitionSource": {
         "type": "article",
         "title": "Phylogenetic approaches toward crocodylian history",
@@ -2726,7 +2737,7 @@
           "description": "Only representative of the Diplocynodontinae clade in this phylogeny."
         }
       },
-      "@id": "http://example.org/brochu_2003.json#phyloref5",
+      "@id": "http://example.org/phyx.js/example#phyloref5",
       "@type": "owl:Class",
       "hasComponentClass": [],
       "equivalentClass": {
@@ -2761,13 +2772,14 @@
         ]
       },
       "subClassOf": [
-        "phyloref:Phyloreference"
+        "phyloref:Phyloreference",
+        "phyloref:PhyloreferenceUsingMaximumClade"
       ]
     }
   ],
   "defaultNomenclaturalCodeURI": "http://purl.obolibrary.org/obo/NOMEN_0000107",
   "hasTaxonomicUnitMatches": [],
-  "@id": "http://example.org/brochu_2003.json#",
+  "@id": "http://example.org/phyx.js/example#",
   "@type": [
     "testcase:PhyloreferenceTestCase",
     "owl:Ontology"
diff --git a/test/examples/correct/brochu_2003.nq b/test/examples/correct/brochu_2003.nq
index ec3c0a85..2f2fd7f9 100644
--- a/test/examples/correct/brochu_2003.nq
+++ b/test/examples/correct/brochu_2003.nq
@@ -1,392 +1,404 @@
-<http://example.org/brochu_2003.json#> <http://vocab.phyloref.org/phyloref/testcase.owl#has_phylogeny> <http://example.org/brochu_2003.json#phylogeny0> .
-<http://example.org/brochu_2003.json#> <http://vocab.phyloref.org/phyloref/testcase.owl#has_phyloreference> <http://example.org/brochu_2003.json#phyloref0> .
-<http://example.org/brochu_2003.json#> <http://vocab.phyloref.org/phyloref/testcase.owl#has_phyloreference> <http://example.org/brochu_2003.json#phyloref1> .
-<http://example.org/brochu_2003.json#> <http://vocab.phyloref.org/phyloref/testcase.owl#has_phyloreference> <http://example.org/brochu_2003.json#phyloref2> .
-<http://example.org/brochu_2003.json#> <http://vocab.phyloref.org/phyloref/testcase.owl#has_phyloreference> <http://example.org/brochu_2003.json#phyloref3> .
-<http://example.org/brochu_2003.json#> <http://vocab.phyloref.org/phyloref/testcase.owl#has_phyloreference> <http://example.org/brochu_2003.json#phyloref4> .
-<http://example.org/brochu_2003.json#> <http://vocab.phyloref.org/phyloref/testcase.owl#has_phyloreference> <http://example.org/brochu_2003.json#phyloref5> .
-<http://example.org/brochu_2003.json#> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://vocab.phyloref.org/phyloref/testcase.owl#PhyloreferenceTestCase> .
-<http://example.org/brochu_2003.json#> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Ontology> .
-<http://example.org/brochu_2003.json#> <http://www.w3.org/2002/07/owl#imports> <http://ontology.phyloref.org/2018-12-14/phyloref.owl> .
-<http://example.org/brochu_2003.json#> <http://www.w3.org/2002/07/owl#imports> <http://ontology.phyloref.org/2018-12-14/tcan.owl> .
-<http://example.org/brochu_2003.json#> <http://www.w3.org/2002/07/owl#imports> <http://raw.githubusercontent.com/phyloref/curation-workflow/develop/ontologies/phyloref_testcase.owl> .
-<http://example.org/brochu_2003.json#phylogeny0> <http://ontology.phyloref.org/phyloref.owl#newick_expression> "(Parasuchia,(rauisuchians,Aetosauria,(sphenosuchians,(protosuchians,(mesosuchians,(Hylaeochampsa,Aegyptosuchus,Stomatosuchus,(Allodaposuchus,('Gavialis gangeticus',(('Diplocynodon ratelii',('Alligator mississippiensis','Caiman crocodilus')Alligatoridae)Alligatoroidea,('Tomistoma schlegelii',('Osteolaemus tetraspis','Crocodylus niloticus')Crocodylinae)Crocodylidae)Brevirostres)Crocodylia))Eusuchia)Mesoeucrocodylia)Crocodyliformes)Crocodylomorpha))root;" .
-<http://example.org/brochu_2003.json#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/brochu_2003.json#phylogeny0_node0> .
-<http://example.org/brochu_2003.json#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/brochu_2003.json#phylogeny0_node10> .
-<http://example.org/brochu_2003.json#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/brochu_2003.json#phylogeny0_node11> .
-<http://example.org/brochu_2003.json#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/brochu_2003.json#phylogeny0_node12> .
-<http://example.org/brochu_2003.json#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/brochu_2003.json#phylogeny0_node13> .
-<http://example.org/brochu_2003.json#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/brochu_2003.json#phylogeny0_node14> .
-<http://example.org/brochu_2003.json#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/brochu_2003.json#phylogeny0_node15> .
-<http://example.org/brochu_2003.json#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/brochu_2003.json#phylogeny0_node16> .
-<http://example.org/brochu_2003.json#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/brochu_2003.json#phylogeny0_node17> .
-<http://example.org/brochu_2003.json#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/brochu_2003.json#phylogeny0_node18> .
-<http://example.org/brochu_2003.json#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/brochu_2003.json#phylogeny0_node19> .
-<http://example.org/brochu_2003.json#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/brochu_2003.json#phylogeny0_node1> .
-<http://example.org/brochu_2003.json#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/brochu_2003.json#phylogeny0_node20> .
-<http://example.org/brochu_2003.json#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/brochu_2003.json#phylogeny0_node21> .
-<http://example.org/brochu_2003.json#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/brochu_2003.json#phylogeny0_node22> .
-<http://example.org/brochu_2003.json#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/brochu_2003.json#phylogeny0_node23> .
-<http://example.org/brochu_2003.json#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/brochu_2003.json#phylogeny0_node24> .
-<http://example.org/brochu_2003.json#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/brochu_2003.json#phylogeny0_node25> .
-<http://example.org/brochu_2003.json#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/brochu_2003.json#phylogeny0_node26> .
-<http://example.org/brochu_2003.json#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/brochu_2003.json#phylogeny0_node27> .
-<http://example.org/brochu_2003.json#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/brochu_2003.json#phylogeny0_node28> .
-<http://example.org/brochu_2003.json#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/brochu_2003.json#phylogeny0_node29> .
-<http://example.org/brochu_2003.json#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/brochu_2003.json#phylogeny0_node2> .
-<http://example.org/brochu_2003.json#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/brochu_2003.json#phylogeny0_node3> .
-<http://example.org/brochu_2003.json#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/brochu_2003.json#phylogeny0_node4> .
-<http://example.org/brochu_2003.json#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/brochu_2003.json#phylogeny0_node5> .
-<http://example.org/brochu_2003.json#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/brochu_2003.json#phylogeny0_node6> .
-<http://example.org/brochu_2003.json#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/brochu_2003.json#phylogeny0_node7> .
-<http://example.org/brochu_2003.json#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/brochu_2003.json#phylogeny0_node8> .
-<http://example.org/brochu_2003.json#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/brochu_2003.json#phylogeny0_node9> .
-<http://example.org/brochu_2003.json#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_root_node> <http://example.org/brochu_2003.json#phylogeny0_node0> .
-<http://example.org/brochu_2003.json#phylogeny0> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://vocab.phyloref.org/phyloref/testcase.owl#PhyloreferenceTestPhylogeny> .
-<http://example.org/brochu_2003.json#phylogeny0> <http://www.w3.org/2000/01/rdf-schema#label> "Fig 1 from Brochu 2003" .
-<http://example.org/brochu_2003.json#phylogeny0_node0> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/brochu_2003.json#phylogeny0_node1> .
-<http://example.org/brochu_2003.json#phylogeny0_node0> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/brochu_2003.json#phylogeny0_node29> .
-<http://example.org/brochu_2003.json#phylogeny0_node0> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
-<http://example.org/brochu_2003.json#phylogeny0_node0> <http://www.w3.org/2000/01/rdf-schema#label> "root" .
-<http://example.org/brochu_2003.json#phylogeny0_node10> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node13> .
-<http://example.org/brochu_2003.json#phylogeny0_node10> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/brochu_2003.json#phylogeny0_node11> .
-<http://example.org/brochu_2003.json#phylogeny0_node10> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/brochu_2003.json#phylogeny0_node12> .
-<http://example.org/brochu_2003.json#phylogeny0_node10> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/brochu_2003.json#phylogeny0_node9> .
-<http://example.org/brochu_2003.json#phylogeny0_node10> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b41 .
-<http://example.org/brochu_2003.json#phylogeny0_node10> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
-<http://example.org/brochu_2003.json#phylogeny0_node10> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b43 .
-<http://example.org/brochu_2003.json#phylogeny0_node10> <http://www.w3.org/2000/01/rdf-schema#label> "Crocodylinae" .
-<http://example.org/brochu_2003.json#phylogeny0_node11> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node12> .
-<http://example.org/brochu_2003.json#phylogeny0_node11> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/brochu_2003.json#phylogeny0_node10> .
-<http://example.org/brochu_2003.json#phylogeny0_node11> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b46 .
-<http://example.org/brochu_2003.json#phylogeny0_node11> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
-<http://example.org/brochu_2003.json#phylogeny0_node11> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b48 .
-<http://example.org/brochu_2003.json#phylogeny0_node11> <http://www.w3.org/2000/01/rdf-schema#label> "Crocodylus niloticus" .
-<http://example.org/brochu_2003.json#phylogeny0_node12> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node11> .
-<http://example.org/brochu_2003.json#phylogeny0_node12> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/brochu_2003.json#phylogeny0_node10> .
-<http://example.org/brochu_2003.json#phylogeny0_node12> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b51 .
-<http://example.org/brochu_2003.json#phylogeny0_node12> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
-<http://example.org/brochu_2003.json#phylogeny0_node12> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b53 .
-<http://example.org/brochu_2003.json#phylogeny0_node12> <http://www.w3.org/2000/01/rdf-schema#label> "Osteolaemus tetraspis" .
-<http://example.org/brochu_2003.json#phylogeny0_node13> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node10> .
-<http://example.org/brochu_2003.json#phylogeny0_node13> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/brochu_2003.json#phylogeny0_node9> .
-<http://example.org/brochu_2003.json#phylogeny0_node13> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b56 .
-<http://example.org/brochu_2003.json#phylogeny0_node13> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
-<http://example.org/brochu_2003.json#phylogeny0_node13> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b58 .
-<http://example.org/brochu_2003.json#phylogeny0_node13> <http://www.w3.org/2000/01/rdf-schema#label> "Tomistoma schlegelii" .
-<http://example.org/brochu_2003.json#phylogeny0_node14> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node9> .
-<http://example.org/brochu_2003.json#phylogeny0_node14> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/brochu_2003.json#phylogeny0_node15> .
-<http://example.org/brochu_2003.json#phylogeny0_node14> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/brochu_2003.json#phylogeny0_node18> .
-<http://example.org/brochu_2003.json#phylogeny0_node14> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/brochu_2003.json#phylogeny0_node8> .
-<http://example.org/brochu_2003.json#phylogeny0_node14> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b61 .
-<http://example.org/brochu_2003.json#phylogeny0_node14> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
-<http://example.org/brochu_2003.json#phylogeny0_node14> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b63 .
-<http://example.org/brochu_2003.json#phylogeny0_node14> <http://www.w3.org/2000/01/rdf-schema#label> "Alligatoroidea" .
-<http://example.org/brochu_2003.json#phylogeny0_node15> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node18> .
-<http://example.org/brochu_2003.json#phylogeny0_node15> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/brochu_2003.json#phylogeny0_node16> .
-<http://example.org/brochu_2003.json#phylogeny0_node15> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/brochu_2003.json#phylogeny0_node17> .
-<http://example.org/brochu_2003.json#phylogeny0_node15> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/brochu_2003.json#phylogeny0_node14> .
-<http://example.org/brochu_2003.json#phylogeny0_node15> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b66 .
-<http://example.org/brochu_2003.json#phylogeny0_node15> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
-<http://example.org/brochu_2003.json#phylogeny0_node15> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b68 .
-<http://example.org/brochu_2003.json#phylogeny0_node15> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b71 .
-<http://example.org/brochu_2003.json#phylogeny0_node15> <http://www.w3.org/2000/01/rdf-schema#label> "Alligatoridae" .
-<http://example.org/brochu_2003.json#phylogeny0_node16> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node17> .
-<http://example.org/brochu_2003.json#phylogeny0_node16> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/brochu_2003.json#phylogeny0_node15> .
-<http://example.org/brochu_2003.json#phylogeny0_node16> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b74 .
-<http://example.org/brochu_2003.json#phylogeny0_node16> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
-<http://example.org/brochu_2003.json#phylogeny0_node16> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b76 .
-<http://example.org/brochu_2003.json#phylogeny0_node16> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b79 .
-<http://example.org/brochu_2003.json#phylogeny0_node16> <http://www.w3.org/2000/01/rdf-schema#label> "Caiman crocodilus" .
-<http://example.org/brochu_2003.json#phylogeny0_node17> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node16> .
-<http://example.org/brochu_2003.json#phylogeny0_node17> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/brochu_2003.json#phylogeny0_node15> .
-<http://example.org/brochu_2003.json#phylogeny0_node17> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b82 .
-<http://example.org/brochu_2003.json#phylogeny0_node17> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
-<http://example.org/brochu_2003.json#phylogeny0_node17> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b84 .
-<http://example.org/brochu_2003.json#phylogeny0_node17> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b87 .
-<http://example.org/brochu_2003.json#phylogeny0_node17> <http://www.w3.org/2000/01/rdf-schema#label> "Alligator mississippiensis" .
-<http://example.org/brochu_2003.json#phylogeny0_node18> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node15> .
-<http://example.org/brochu_2003.json#phylogeny0_node18> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/brochu_2003.json#phylogeny0_node14> .
-<http://example.org/brochu_2003.json#phylogeny0_node18> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b90 .
-<http://example.org/brochu_2003.json#phylogeny0_node18> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
-<http://example.org/brochu_2003.json#phylogeny0_node18> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b92 .
-<http://example.org/brochu_2003.json#phylogeny0_node18> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b95 .
-<http://example.org/brochu_2003.json#phylogeny0_node18> <http://www.w3.org/2000/01/rdf-schema#label> "Diplocynodon ratelii" .
-<http://example.org/brochu_2003.json#phylogeny0_node19> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node8> .
-<http://example.org/brochu_2003.json#phylogeny0_node19> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/brochu_2003.json#phylogeny0_node7> .
-<http://example.org/brochu_2003.json#phylogeny0_node19> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b98 .
-<http://example.org/brochu_2003.json#phylogeny0_node19> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
-<http://example.org/brochu_2003.json#phylogeny0_node19> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b100 .
-<http://example.org/brochu_2003.json#phylogeny0_node19> <http://www.w3.org/2000/01/rdf-schema#label> "Gavialis gangeticus" .
-<http://example.org/brochu_2003.json#phylogeny0_node1> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node29> .
-<http://example.org/brochu_2003.json#phylogeny0_node1> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/brochu_2003.json#phylogeny0_node27> .
-<http://example.org/brochu_2003.json#phylogeny0_node1> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/brochu_2003.json#phylogeny0_node28> .
-<http://example.org/brochu_2003.json#phylogeny0_node1> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/brochu_2003.json#phylogeny0_node2> .
-<http://example.org/brochu_2003.json#phylogeny0_node1> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/brochu_2003.json#phylogeny0_node0> .
-<http://example.org/brochu_2003.json#phylogeny0_node1> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
-<http://example.org/brochu_2003.json#phylogeny0_node20> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node7> .
-<http://example.org/brochu_2003.json#phylogeny0_node20> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/brochu_2003.json#phylogeny0_node6> .
-<http://example.org/brochu_2003.json#phylogeny0_node20> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b103 .
-<http://example.org/brochu_2003.json#phylogeny0_node20> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
-<http://example.org/brochu_2003.json#phylogeny0_node20> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b105 .
-<http://example.org/brochu_2003.json#phylogeny0_node20> <http://www.w3.org/2000/01/rdf-schema#label> "Allodaposuchus" .
-<http://example.org/brochu_2003.json#phylogeny0_node21> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node22> .
-<http://example.org/brochu_2003.json#phylogeny0_node21> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node23> .
-<http://example.org/brochu_2003.json#phylogeny0_node21> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node6> .
-<http://example.org/brochu_2003.json#phylogeny0_node21> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/brochu_2003.json#phylogeny0_node5> .
-<http://example.org/brochu_2003.json#phylogeny0_node21> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b108 .
-<http://example.org/brochu_2003.json#phylogeny0_node21> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
-<http://example.org/brochu_2003.json#phylogeny0_node21> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b110 .
-<http://example.org/brochu_2003.json#phylogeny0_node21> <http://www.w3.org/2000/01/rdf-schema#label> "Stomatosuchus" .
-<http://example.org/brochu_2003.json#phylogeny0_node22> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node21> .
-<http://example.org/brochu_2003.json#phylogeny0_node22> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node23> .
-<http://example.org/brochu_2003.json#phylogeny0_node22> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node6> .
-<http://example.org/brochu_2003.json#phylogeny0_node22> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/brochu_2003.json#phylogeny0_node5> .
-<http://example.org/brochu_2003.json#phylogeny0_node22> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b113 .
-<http://example.org/brochu_2003.json#phylogeny0_node22> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
-<http://example.org/brochu_2003.json#phylogeny0_node22> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b115 .
-<http://example.org/brochu_2003.json#phylogeny0_node22> <http://www.w3.org/2000/01/rdf-schema#label> "Aegyptosuchus" .
-<http://example.org/brochu_2003.json#phylogeny0_node23> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node21> .
-<http://example.org/brochu_2003.json#phylogeny0_node23> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node22> .
-<http://example.org/brochu_2003.json#phylogeny0_node23> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node6> .
-<http://example.org/brochu_2003.json#phylogeny0_node23> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/brochu_2003.json#phylogeny0_node5> .
-<http://example.org/brochu_2003.json#phylogeny0_node23> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b118 .
-<http://example.org/brochu_2003.json#phylogeny0_node23> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
-<http://example.org/brochu_2003.json#phylogeny0_node23> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b120 .
-<http://example.org/brochu_2003.json#phylogeny0_node23> <http://www.w3.org/2000/01/rdf-schema#label> "Hylaeochampsa" .
-<http://example.org/brochu_2003.json#phylogeny0_node24> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node5> .
-<http://example.org/brochu_2003.json#phylogeny0_node24> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/brochu_2003.json#phylogeny0_node4> .
-<http://example.org/brochu_2003.json#phylogeny0_node24> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
-<http://example.org/brochu_2003.json#phylogeny0_node24> <http://www.w3.org/2000/01/rdf-schema#label> "mesosuchians" .
-<http://example.org/brochu_2003.json#phylogeny0_node25> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node4> .
-<http://example.org/brochu_2003.json#phylogeny0_node25> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/brochu_2003.json#phylogeny0_node3> .
-<http://example.org/brochu_2003.json#phylogeny0_node25> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
-<http://example.org/brochu_2003.json#phylogeny0_node25> <http://www.w3.org/2000/01/rdf-schema#label> "protosuchians" .
-<http://example.org/brochu_2003.json#phylogeny0_node26> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node3> .
-<http://example.org/brochu_2003.json#phylogeny0_node26> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/brochu_2003.json#phylogeny0_node2> .
-<http://example.org/brochu_2003.json#phylogeny0_node26> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
-<http://example.org/brochu_2003.json#phylogeny0_node26> <http://www.w3.org/2000/01/rdf-schema#label> "sphenosuchians" .
-<http://example.org/brochu_2003.json#phylogeny0_node27> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node28> .
-<http://example.org/brochu_2003.json#phylogeny0_node27> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node2> .
-<http://example.org/brochu_2003.json#phylogeny0_node27> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/brochu_2003.json#phylogeny0_node1> .
-<http://example.org/brochu_2003.json#phylogeny0_node27> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b123 .
-<http://example.org/brochu_2003.json#phylogeny0_node27> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
-<http://example.org/brochu_2003.json#phylogeny0_node27> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b125 .
-<http://example.org/brochu_2003.json#phylogeny0_node27> <http://www.w3.org/2000/01/rdf-schema#label> "Aetosauria" .
-<http://example.org/brochu_2003.json#phylogeny0_node28> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node27> .
-<http://example.org/brochu_2003.json#phylogeny0_node28> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node2> .
-<http://example.org/brochu_2003.json#phylogeny0_node28> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/brochu_2003.json#phylogeny0_node1> .
-<http://example.org/brochu_2003.json#phylogeny0_node28> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
-<http://example.org/brochu_2003.json#phylogeny0_node28> <http://www.w3.org/2000/01/rdf-schema#label> "rauisuchians" .
-<http://example.org/brochu_2003.json#phylogeny0_node29> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node1> .
-<http://example.org/brochu_2003.json#phylogeny0_node29> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/brochu_2003.json#phylogeny0_node0> .
-<http://example.org/brochu_2003.json#phylogeny0_node29> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b128 .
-<http://example.org/brochu_2003.json#phylogeny0_node29> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
-<http://example.org/brochu_2003.json#phylogeny0_node29> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b130 .
-<http://example.org/brochu_2003.json#phylogeny0_node29> <http://www.w3.org/2000/01/rdf-schema#label> "Parasuchia" .
-<http://example.org/brochu_2003.json#phylogeny0_node2> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node27> .
-<http://example.org/brochu_2003.json#phylogeny0_node2> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node28> .
-<http://example.org/brochu_2003.json#phylogeny0_node2> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/brochu_2003.json#phylogeny0_node26> .
-<http://example.org/brochu_2003.json#phylogeny0_node2> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/brochu_2003.json#phylogeny0_node3> .
-<http://example.org/brochu_2003.json#phylogeny0_node2> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/brochu_2003.json#phylogeny0_node1> .
-<http://example.org/brochu_2003.json#phylogeny0_node2> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b0 .
-<http://example.org/brochu_2003.json#phylogeny0_node2> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
-<http://example.org/brochu_2003.json#phylogeny0_node2> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b2 .
-<http://example.org/brochu_2003.json#phylogeny0_node2> <http://www.w3.org/2000/01/rdf-schema#label> "Crocodylomorpha" .
-<http://example.org/brochu_2003.json#phylogeny0_node3> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node26> .
-<http://example.org/brochu_2003.json#phylogeny0_node3> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/brochu_2003.json#phylogeny0_node25> .
-<http://example.org/brochu_2003.json#phylogeny0_node3> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/brochu_2003.json#phylogeny0_node4> .
-<http://example.org/brochu_2003.json#phylogeny0_node3> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/brochu_2003.json#phylogeny0_node2> .
-<http://example.org/brochu_2003.json#phylogeny0_node3> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b5 .
-<http://example.org/brochu_2003.json#phylogeny0_node3> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
-<http://example.org/brochu_2003.json#phylogeny0_node3> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b7 .
-<http://example.org/brochu_2003.json#phylogeny0_node3> <http://www.w3.org/2000/01/rdf-schema#label> "Crocodyliformes" .
-<http://example.org/brochu_2003.json#phylogeny0_node4> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node25> .
-<http://example.org/brochu_2003.json#phylogeny0_node4> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/brochu_2003.json#phylogeny0_node24> .
-<http://example.org/brochu_2003.json#phylogeny0_node4> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/brochu_2003.json#phylogeny0_node5> .
-<http://example.org/brochu_2003.json#phylogeny0_node4> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/brochu_2003.json#phylogeny0_node3> .
-<http://example.org/brochu_2003.json#phylogeny0_node4> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b10 .
-<http://example.org/brochu_2003.json#phylogeny0_node4> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
-<http://example.org/brochu_2003.json#phylogeny0_node4> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b12 .
-<http://example.org/brochu_2003.json#phylogeny0_node4> <http://www.w3.org/2000/01/rdf-schema#label> "Mesoeucrocodylia" .
-<http://example.org/brochu_2003.json#phylogeny0_node5> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node24> .
-<http://example.org/brochu_2003.json#phylogeny0_node5> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/brochu_2003.json#phylogeny0_node21> .
-<http://example.org/brochu_2003.json#phylogeny0_node5> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/brochu_2003.json#phylogeny0_node22> .
-<http://example.org/brochu_2003.json#phylogeny0_node5> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/brochu_2003.json#phylogeny0_node23> .
-<http://example.org/brochu_2003.json#phylogeny0_node5> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/brochu_2003.json#phylogeny0_node6> .
-<http://example.org/brochu_2003.json#phylogeny0_node5> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/brochu_2003.json#phylogeny0_node4> .
-<http://example.org/brochu_2003.json#phylogeny0_node5> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b15 .
-<http://example.org/brochu_2003.json#phylogeny0_node5> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
-<http://example.org/brochu_2003.json#phylogeny0_node5> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b17 .
-<http://example.org/brochu_2003.json#phylogeny0_node5> <http://www.w3.org/2000/01/rdf-schema#label> "Eusuchia" .
-<http://example.org/brochu_2003.json#phylogeny0_node6> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node21> .
-<http://example.org/brochu_2003.json#phylogeny0_node6> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node22> .
-<http://example.org/brochu_2003.json#phylogeny0_node6> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node23> .
-<http://example.org/brochu_2003.json#phylogeny0_node6> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/brochu_2003.json#phylogeny0_node20> .
-<http://example.org/brochu_2003.json#phylogeny0_node6> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/brochu_2003.json#phylogeny0_node7> .
-<http://example.org/brochu_2003.json#phylogeny0_node6> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/brochu_2003.json#phylogeny0_node5> .
-<http://example.org/brochu_2003.json#phylogeny0_node6> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
-<http://example.org/brochu_2003.json#phylogeny0_node7> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node20> .
-<http://example.org/brochu_2003.json#phylogeny0_node7> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/brochu_2003.json#phylogeny0_node19> .
-<http://example.org/brochu_2003.json#phylogeny0_node7> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/brochu_2003.json#phylogeny0_node8> .
-<http://example.org/brochu_2003.json#phylogeny0_node7> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/brochu_2003.json#phylogeny0_node6> .
-<http://example.org/brochu_2003.json#phylogeny0_node7> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b20 .
-<http://example.org/brochu_2003.json#phylogeny0_node7> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
-<http://example.org/brochu_2003.json#phylogeny0_node7> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b22 .
-<http://example.org/brochu_2003.json#phylogeny0_node7> <http://www.w3.org/2000/01/rdf-schema#label> "Crocodylia" .
-<http://example.org/brochu_2003.json#phylogeny0_node8> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node19> .
-<http://example.org/brochu_2003.json#phylogeny0_node8> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/brochu_2003.json#phylogeny0_node14> .
-<http://example.org/brochu_2003.json#phylogeny0_node8> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/brochu_2003.json#phylogeny0_node9> .
-<http://example.org/brochu_2003.json#phylogeny0_node8> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/brochu_2003.json#phylogeny0_node7> .
-<http://example.org/brochu_2003.json#phylogeny0_node8> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b25 .
-<http://example.org/brochu_2003.json#phylogeny0_node8> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
-<http://example.org/brochu_2003.json#phylogeny0_node8> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b27 .
-<http://example.org/brochu_2003.json#phylogeny0_node8> <http://www.w3.org/2000/01/rdf-schema#label> "Brevirostres" .
-<http://example.org/brochu_2003.json#phylogeny0_node9> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/brochu_2003.json#phylogeny0_node14> .
-<http://example.org/brochu_2003.json#phylogeny0_node9> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/brochu_2003.json#phylogeny0_node10> .
-<http://example.org/brochu_2003.json#phylogeny0_node9> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/brochu_2003.json#phylogeny0_node13> .
-<http://example.org/brochu_2003.json#phylogeny0_node9> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/brochu_2003.json#phylogeny0_node8> .
-<http://example.org/brochu_2003.json#phylogeny0_node9> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b30 .
-<http://example.org/brochu_2003.json#phylogeny0_node9> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
-<http://example.org/brochu_2003.json#phylogeny0_node9> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b32 .
-<http://example.org/brochu_2003.json#phylogeny0_node9> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b35 .
-<http://example.org/brochu_2003.json#phylogeny0_node9> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b38 .
-<http://example.org/brochu_2003.json#phylogeny0_node9> <http://www.w3.org/2000/01/rdf-schema#label> "Crocodylidae" .
-<http://example.org/brochu_2003.json#phyloref0> <http://purl.obolibrary.org/obo/IAO_0000119> _:b133 .
-<http://example.org/brochu_2003.json#phyloref0> <http://purl.org/spar/pso/holdsStatusInTime> _:b134 .
-<http://example.org/brochu_2003.json#phyloref0> <http://vocab.phyloref.org/phyloref/testcase.owl#internal_specifier> _:b136 .
-<http://example.org/brochu_2003.json#phyloref0> <http://vocab.phyloref.org/phyloref/testcase.owl#internal_specifier> _:b138 .
-<http://example.org/brochu_2003.json#phyloref0> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
-<http://example.org/brochu_2003.json#phyloref0> <http://www.w3.org/2000/01/rdf-schema#label> "Alligatoridae" .
-<http://example.org/brochu_2003.json#phyloref0> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#Phyloreference> .
-<http://example.org/brochu_2003.json#phyloref0> <http://www.w3.org/2002/07/owl#equivalentClass> _:b140 .
-<http://example.org/brochu_2003.json#phyloref1> <http://purl.obolibrary.org/obo/IAO_0000119> _:b148 .
-<http://example.org/brochu_2003.json#phyloref1> <http://purl.org/spar/pso/holdsStatusInTime> _:b149 .
-<http://example.org/brochu_2003.json#phyloref1> <http://vocab.phyloref.org/phyloref/testcase.owl#external_specifier> _:b151 .
-<http://example.org/brochu_2003.json#phyloref1> <http://vocab.phyloref.org/phyloref/testcase.owl#internal_specifier> _:b153 .
-<http://example.org/brochu_2003.json#phyloref1> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
-<http://example.org/brochu_2003.json#phyloref1> <http://www.w3.org/2000/01/rdf-schema#label> "Alligatorinae" .
-<http://example.org/brochu_2003.json#phyloref1> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#Phyloreference> .
-<http://example.org/brochu_2003.json#phyloref1> <http://www.w3.org/2002/07/owl#equivalentClass> _:b155 .
-<http://example.org/brochu_2003.json#phyloref2> <http://purl.obolibrary.org/obo/IAO_0000119> _:b162 .
-<http://example.org/brochu_2003.json#phyloref2> <http://purl.org/spar/pso/holdsStatusInTime> _:b163 .
-<http://example.org/brochu_2003.json#phyloref2> <http://vocab.phyloref.org/phyloref/testcase.owl#external_specifier> _:b165 .
-<http://example.org/brochu_2003.json#phyloref2> <http://vocab.phyloref.org/phyloref/testcase.owl#internal_specifier> _:b167 .
-<http://example.org/brochu_2003.json#phyloref2> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
-<http://example.org/brochu_2003.json#phyloref2> <http://www.w3.org/2000/01/rdf-schema#label> "Caimaninae" .
-<http://example.org/brochu_2003.json#phyloref2> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#Phyloreference> .
-<http://example.org/brochu_2003.json#phyloref2> <http://www.w3.org/2002/07/owl#equivalentClass> _:b169 .
-<http://example.org/brochu_2003.json#phyloref3> <http://purl.org/spar/pso/holdsStatusInTime> _:b176 .
-<http://example.org/brochu_2003.json#phyloref3> <http://vocab.phyloref.org/phyloref/testcase.owl#external_specifier> _:b178 .
-<http://example.org/brochu_2003.json#phyloref3> <http://vocab.phyloref.org/phyloref/testcase.owl#external_specifier> _:b180 .
-<http://example.org/brochu_2003.json#phyloref3> <http://vocab.phyloref.org/phyloref/testcase.owl#has_component_class> <http://example.org/brochu_2003.json#phyloref3_component1> .
-<http://example.org/brochu_2003.json#phyloref3> <http://vocab.phyloref.org/phyloref/testcase.owl#has_component_class> <http://example.org/brochu_2003.json#phyloref3_component2> .
-<http://example.org/brochu_2003.json#phyloref3> <http://vocab.phyloref.org/phyloref/testcase.owl#has_component_class> <http://example.org/brochu_2003.json#phyloref3_component3> .
-<http://example.org/brochu_2003.json#phyloref3> <http://vocab.phyloref.org/phyloref/testcase.owl#has_component_class> <http://example.org/brochu_2003.json#phyloref3_component4> .
-<http://example.org/brochu_2003.json#phyloref3> <http://vocab.phyloref.org/phyloref/testcase.owl#has_component_class> <http://example.org/brochu_2003.json#phyloref3_component5> .
-<http://example.org/brochu_2003.json#phyloref3> <http://vocab.phyloref.org/phyloref/testcase.owl#has_component_class> <http://example.org/brochu_2003.json#phyloref3_component6> .
-<http://example.org/brochu_2003.json#phyloref3> <http://vocab.phyloref.org/phyloref/testcase.owl#internal_specifier> _:b214 .
-<http://example.org/brochu_2003.json#phyloref3> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
-<http://example.org/brochu_2003.json#phyloref3> <http://www.w3.org/2000/01/rdf-schema#label> "Crocodyloidea" .
-<http://example.org/brochu_2003.json#phyloref3> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#Phyloreference> .
-<http://example.org/brochu_2003.json#phyloref3_component1> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
-<http://example.org/brochu_2003.json#phyloref3_component1> <http://www.w3.org/2000/01/rdf-schema#label> "(Crocodylus niloticus ~ Alligator mississippiensis)" .
-<http://example.org/brochu_2003.json#phyloref3_component1> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMaximumClade> .
-<http://example.org/brochu_2003.json#phyloref3_component1> <http://www.w3.org/2002/07/owl#equivalentClass> _:b182 .
-<http://example.org/brochu_2003.json#phyloref3_component2> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
-<http://example.org/brochu_2003.json#phyloref3_component2> <http://www.w3.org/2000/01/rdf-schema#label> "(Crocodylus niloticus ~ Gavialis gangeticus)" .
-<http://example.org/brochu_2003.json#phyloref3_component2> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMaximumClade> .
-<http://example.org/brochu_2003.json#phyloref3_component2> <http://www.w3.org/2002/07/owl#equivalentClass> _:b189 .
-<http://example.org/brochu_2003.json#phyloref3_component3> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
-<http://example.org/brochu_2003.json#phyloref3_component3> <http://www.w3.org/2000/01/rdf-schema#label> "(Crocodylus niloticus ~ Alligator mississippiensis V Gavialis gangeticus)" .
-<http://example.org/brochu_2003.json#phyloref3_component3> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://example.org/brochu_2003.json#phyloref3> .
-<http://example.org/brochu_2003.json#phyloref3_component3> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMaximumClade> .
-<http://example.org/brochu_2003.json#phyloref3_component3> <http://www.w3.org/2002/07/owl#equivalentClass> _:b196 .
-<http://example.org/brochu_2003.json#phyloref3_component4> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
-<http://example.org/brochu_2003.json#phyloref3_component4> <http://www.w3.org/2000/01/rdf-schema#label> "(Crocodylus niloticus ~ Alligator mississippiensis V Gavialis gangeticus)" .
-<http://example.org/brochu_2003.json#phyloref3_component4> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://example.org/brochu_2003.json#phyloref3> .
-<http://example.org/brochu_2003.json#phyloref3_component4> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMaximumClade> .
-<http://example.org/brochu_2003.json#phyloref3_component4> <http://www.w3.org/2002/07/owl#equivalentClass> _:b200 .
-<http://example.org/brochu_2003.json#phyloref3_component5> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
-<http://example.org/brochu_2003.json#phyloref3_component5> <http://www.w3.org/2000/01/rdf-schema#label> "(Crocodylus niloticus ~ Alligator mississippiensis V Gavialis gangeticus)" .
-<http://example.org/brochu_2003.json#phyloref3_component5> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://example.org/brochu_2003.json#phyloref3> .
-<http://example.org/brochu_2003.json#phyloref3_component5> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMaximumClade> .
-<http://example.org/brochu_2003.json#phyloref3_component5> <http://www.w3.org/2002/07/owl#equivalentClass> _:b205 .
-<http://example.org/brochu_2003.json#phyloref3_component6> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
-<http://example.org/brochu_2003.json#phyloref3_component6> <http://www.w3.org/2000/01/rdf-schema#label> "(Crocodylus niloticus ~ Alligator mississippiensis V Gavialis gangeticus)" .
-<http://example.org/brochu_2003.json#phyloref3_component6> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://example.org/brochu_2003.json#phyloref3> .
-<http://example.org/brochu_2003.json#phyloref3_component6> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMaximumClade> .
-<http://example.org/brochu_2003.json#phyloref3_component6> <http://www.w3.org/2002/07/owl#equivalentClass> _:b209 .
-<http://example.org/brochu_2003.json#phyloref4> <http://purl.obolibrary.org/obo/IAO_0000119> _:b216 .
-<http://example.org/brochu_2003.json#phyloref4> <http://purl.org/spar/pso/holdsStatusInTime> _:b217 .
-<http://example.org/brochu_2003.json#phyloref4> <http://vocab.phyloref.org/phyloref/testcase.owl#has_component_class> <http://example.org/brochu_2003.json#phyloref4_component1> .
-<http://example.org/brochu_2003.json#phyloref4> <http://vocab.phyloref.org/phyloref/testcase.owl#has_component_class> <http://example.org/brochu_2003.json#phyloref4_component2> .
-<http://example.org/brochu_2003.json#phyloref4> <http://vocab.phyloref.org/phyloref/testcase.owl#has_component_class> <http://example.org/brochu_2003.json#phyloref4_component3> .
-<http://example.org/brochu_2003.json#phyloref4> <http://vocab.phyloref.org/phyloref/testcase.owl#has_component_class> <http://example.org/brochu_2003.json#phyloref4_component4> .
-<http://example.org/brochu_2003.json#phyloref4> <http://vocab.phyloref.org/phyloref/testcase.owl#has_component_class> <http://example.org/brochu_2003.json#phyloref4_component5> .
-<http://example.org/brochu_2003.json#phyloref4> <http://vocab.phyloref.org/phyloref/testcase.owl#has_component_class> <http://example.org/brochu_2003.json#phyloref4_component6> .
-<http://example.org/brochu_2003.json#phyloref4> <http://vocab.phyloref.org/phyloref/testcase.owl#has_component_class> <http://example.org/brochu_2003.json#phyloref4_component7> .
-<http://example.org/brochu_2003.json#phyloref4> <http://vocab.phyloref.org/phyloref/testcase.owl#has_component_class> <http://example.org/brochu_2003.json#phyloref4_component8> .
-<http://example.org/brochu_2003.json#phyloref4> <http://vocab.phyloref.org/phyloref/testcase.owl#has_component_class> <http://example.org/brochu_2003.json#phyloref4_component9> .
-<http://example.org/brochu_2003.json#phyloref4> <http://vocab.phyloref.org/phyloref/testcase.owl#internal_specifier> _:b345 .
-<http://example.org/brochu_2003.json#phyloref4> <http://vocab.phyloref.org/phyloref/testcase.owl#internal_specifier> _:b347 .
-<http://example.org/brochu_2003.json#phyloref4> <http://vocab.phyloref.org/phyloref/testcase.owl#internal_specifier> _:b349 .
-<http://example.org/brochu_2003.json#phyloref4> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
-<http://example.org/brochu_2003.json#phyloref4> <http://www.w3.org/2000/01/rdf-schema#label> "Crocodylidae" .
-<http://example.org/brochu_2003.json#phyloref4> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#Phyloreference> .
-<http://example.org/brochu_2003.json#phyloref4_component1> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
-<http://example.org/brochu_2003.json#phyloref4_component1> <http://www.w3.org/2000/01/rdf-schema#label> "(Crocodylus niloticus & Osteolaemus tetraspis & Tomistoma schlegelii)" .
-<http://example.org/brochu_2003.json#phyloref4_component1> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://example.org/brochu_2003.json#phyloref4> .
-<http://example.org/brochu_2003.json#phyloref4_component1> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMinimumClade> .
-<http://example.org/brochu_2003.json#phyloref4_component1> <http://www.w3.org/2002/07/owl#equivalentClass> _:b219 .
-<http://example.org/brochu_2003.json#phyloref4_component2> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
-<http://example.org/brochu_2003.json#phyloref4_component2> <http://www.w3.org/2000/01/rdf-schema#label> "(Crocodylus niloticus & Osteolaemus tetraspis & Tomistoma schlegelii)" .
-<http://example.org/brochu_2003.json#phyloref4_component2> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://example.org/brochu_2003.json#phyloref4> .
-<http://example.org/brochu_2003.json#phyloref4_component2> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMinimumClade> .
-<http://example.org/brochu_2003.json#phyloref4_component2> <http://www.w3.org/2002/07/owl#equivalentClass> _:b233 .
-<http://example.org/brochu_2003.json#phyloref4_component3> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
-<http://example.org/brochu_2003.json#phyloref4_component3> <http://www.w3.org/2000/01/rdf-schema#label> "(Crocodylus niloticus & Osteolaemus tetraspis & Tomistoma schlegelii)" .
-<http://example.org/brochu_2003.json#phyloref4_component3> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://example.org/brochu_2003.json#phyloref4> .
-<http://example.org/brochu_2003.json#phyloref4_component3> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMinimumClade> .
-<http://example.org/brochu_2003.json#phyloref4_component3> <http://www.w3.org/2002/07/owl#equivalentClass> _:b247 .
-<http://example.org/brochu_2003.json#phyloref4_component4> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
-<http://example.org/brochu_2003.json#phyloref4_component4> <http://www.w3.org/2000/01/rdf-schema#label> "(Crocodylus niloticus & Osteolaemus tetraspis & Tomistoma schlegelii)" .
-<http://example.org/brochu_2003.json#phyloref4_component4> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://example.org/brochu_2003.json#phyloref4> .
-<http://example.org/brochu_2003.json#phyloref4_component4> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMinimumClade> .
-<http://example.org/brochu_2003.json#phyloref4_component4> <http://www.w3.org/2002/07/owl#equivalentClass> _:b261 .
-<http://example.org/brochu_2003.json#phyloref4_component5> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
-<http://example.org/brochu_2003.json#phyloref4_component5> <http://www.w3.org/2000/01/rdf-schema#label> "(Crocodylus niloticus & Osteolaemus tetraspis & Tomistoma schlegelii)" .
-<http://example.org/brochu_2003.json#phyloref4_component5> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://example.org/brochu_2003.json#phyloref4> .
-<http://example.org/brochu_2003.json#phyloref4_component5> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMinimumClade> .
-<http://example.org/brochu_2003.json#phyloref4_component5> <http://www.w3.org/2002/07/owl#equivalentClass> _:b275 .
-<http://example.org/brochu_2003.json#phyloref4_component6> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
-<http://example.org/brochu_2003.json#phyloref4_component6> <http://www.w3.org/2000/01/rdf-schema#label> "(Crocodylus niloticus & Osteolaemus tetraspis & Tomistoma schlegelii)" .
-<http://example.org/brochu_2003.json#phyloref4_component6> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://example.org/brochu_2003.json#phyloref4> .
-<http://example.org/brochu_2003.json#phyloref4_component6> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMinimumClade> .
-<http://example.org/brochu_2003.json#phyloref4_component6> <http://www.w3.org/2002/07/owl#equivalentClass> _:b289 .
-<http://example.org/brochu_2003.json#phyloref4_component7> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
-<http://example.org/brochu_2003.json#phyloref4_component7> <http://www.w3.org/2000/01/rdf-schema#label> "(Crocodylus niloticus & Osteolaemus tetraspis & Tomistoma schlegelii)" .
-<http://example.org/brochu_2003.json#phyloref4_component7> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://example.org/brochu_2003.json#phyloref4> .
-<http://example.org/brochu_2003.json#phyloref4_component7> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMinimumClade> .
-<http://example.org/brochu_2003.json#phyloref4_component7> <http://www.w3.org/2002/07/owl#equivalentClass> _:b303 .
-<http://example.org/brochu_2003.json#phyloref4_component8> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
-<http://example.org/brochu_2003.json#phyloref4_component8> <http://www.w3.org/2000/01/rdf-schema#label> "(Crocodylus niloticus & Osteolaemus tetraspis & Tomistoma schlegelii)" .
-<http://example.org/brochu_2003.json#phyloref4_component8> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://example.org/brochu_2003.json#phyloref4> .
-<http://example.org/brochu_2003.json#phyloref4_component8> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMinimumClade> .
-<http://example.org/brochu_2003.json#phyloref4_component8> <http://www.w3.org/2002/07/owl#equivalentClass> _:b317 .
-<http://example.org/brochu_2003.json#phyloref4_component9> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
-<http://example.org/brochu_2003.json#phyloref4_component9> <http://www.w3.org/2000/01/rdf-schema#label> "(Crocodylus niloticus & Osteolaemus tetraspis & Tomistoma schlegelii)" .
-<http://example.org/brochu_2003.json#phyloref4_component9> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://example.org/brochu_2003.json#phyloref4> .
-<http://example.org/brochu_2003.json#phyloref4_component9> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMinimumClade> .
-<http://example.org/brochu_2003.json#phyloref4_component9> <http://www.w3.org/2002/07/owl#equivalentClass> _:b331 .
-<http://example.org/brochu_2003.json#phyloref5> <http://purl.obolibrary.org/obo/IAO_0000119> _:b351 .
-<http://example.org/brochu_2003.json#phyloref5> <http://purl.org/spar/pso/holdsStatusInTime> _:b352 .
-<http://example.org/brochu_2003.json#phyloref5> <http://vocab.phyloref.org/phyloref/testcase.owl#external_specifier> _:b354 .
-<http://example.org/brochu_2003.json#phyloref5> <http://vocab.phyloref.org/phyloref/testcase.owl#internal_specifier> _:b356 .
-<http://example.org/brochu_2003.json#phyloref5> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
-<http://example.org/brochu_2003.json#phyloref5> <http://www.w3.org/2000/01/rdf-schema#label> "Diplocynodontinae" .
-<http://example.org/brochu_2003.json#phyloref5> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#Phyloreference> .
-<http://example.org/brochu_2003.json#phyloref5> <http://www.w3.org/2002/07/owl#equivalentClass> _:b358 .
+<http://example.org/phyx.js/example#> <http://vocab.phyloref.org/phyloref/testcase.owl#has_phylogeny> <http://example.org/phyx.js/example#phylogeny0> .
+<http://example.org/phyx.js/example#> <http://vocab.phyloref.org/phyloref/testcase.owl#has_phyloreference> <http://example.org/phyx.js/example#phyloref0> .
+<http://example.org/phyx.js/example#> <http://vocab.phyloref.org/phyloref/testcase.owl#has_phyloreference> <http://example.org/phyx.js/example#phyloref1> .
+<http://example.org/phyx.js/example#> <http://vocab.phyloref.org/phyloref/testcase.owl#has_phyloreference> <http://example.org/phyx.js/example#phyloref2> .
+<http://example.org/phyx.js/example#> <http://vocab.phyloref.org/phyloref/testcase.owl#has_phyloreference> <http://example.org/phyx.js/example#phyloref3> .
+<http://example.org/phyx.js/example#> <http://vocab.phyloref.org/phyloref/testcase.owl#has_phyloreference> <http://example.org/phyx.js/example#phyloref4> .
+<http://example.org/phyx.js/example#> <http://vocab.phyloref.org/phyloref/testcase.owl#has_phyloreference> <http://example.org/phyx.js/example#phyloref5> .
+<http://example.org/phyx.js/example#> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://vocab.phyloref.org/phyloref/testcase.owl#PhyloreferenceTestCase> .
+<http://example.org/phyx.js/example#> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Ontology> .
+<http://example.org/phyx.js/example#> <http://www.w3.org/2002/07/owl#imports> <http://ontology.phyloref.org/2018-12-14/phyloref.owl> .
+<http://example.org/phyx.js/example#> <http://www.w3.org/2002/07/owl#imports> <http://ontology.phyloref.org/2018-12-14/tcan.owl> .
+<http://example.org/phyx.js/example#> <http://www.w3.org/2002/07/owl#imports> <http://raw.githubusercontent.com/phyloref/curation-workflow/develop/ontologies/phyloref_testcase.owl> .
+<http://example.org/phyx.js/example#phylogeny0> <http://ontology.phyloref.org/phyloref.owl#newick_expression> "(Parasuchia,(rauisuchians,Aetosauria,(sphenosuchians,(protosuchians,(mesosuchians,(Hylaeochampsa,Aegyptosuchus,Stomatosuchus,(Allodaposuchus,('Gavialis gangeticus',(('Diplocynodon ratelii',('Alligator mississippiensis','Caiman crocodilus')Alligatoridae)Alligatoroidea,('Tomistoma schlegelii',('Osteolaemus tetraspis','Crocodylus niloticus')Crocodylinae)Crocodylidae)Brevirostres)Crocodylia))Eusuchia)Mesoeucrocodylia)Crocodyliformes)Crocodylomorpha))root;" .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node0> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node10> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node11> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node12> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node13> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node14> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node15> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node16> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node17> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node18> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node19> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node1> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node20> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node21> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node22> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node23> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node24> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node25> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node26> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node27> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node28> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node29> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node2> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node3> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node4> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node5> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node6> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node7> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node8> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node9> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_root_node> <http://example.org/phyx.js/example#phylogeny0_node0> .
+<http://example.org/phyx.js/example#phylogeny0> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://vocab.phyloref.org/phyloref/testcase.owl#PhyloreferenceTestPhylogeny> .
+<http://example.org/phyx.js/example#phylogeny0> <http://www.w3.org/2000/01/rdf-schema#label> "Fig 1 from Brochu 2003" .
+<http://example.org/phyx.js/example#phylogeny0_node0> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node1> .
+<http://example.org/phyx.js/example#phylogeny0_node0> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node29> .
+<http://example.org/phyx.js/example#phylogeny0_node0> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node0> <http://www.w3.org/2000/01/rdf-schema#label> "root" .
+<http://example.org/phyx.js/example#phylogeny0_node10> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node13> .
+<http://example.org/phyx.js/example#phylogeny0_node10> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node11> .
+<http://example.org/phyx.js/example#phylogeny0_node10> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node12> .
+<http://example.org/phyx.js/example#phylogeny0_node10> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node9> .
+<http://example.org/phyx.js/example#phylogeny0_node10> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b41 .
+<http://example.org/phyx.js/example#phylogeny0_node10> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node10> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b43 .
+<http://example.org/phyx.js/example#phylogeny0_node10> <http://www.w3.org/2000/01/rdf-schema#label> "Crocodylinae" .
+<http://example.org/phyx.js/example#phylogeny0_node11> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node12> .
+<http://example.org/phyx.js/example#phylogeny0_node11> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node10> .
+<http://example.org/phyx.js/example#phylogeny0_node11> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b46 .
+<http://example.org/phyx.js/example#phylogeny0_node11> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node11> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b48 .
+<http://example.org/phyx.js/example#phylogeny0_node11> <http://www.w3.org/2000/01/rdf-schema#label> "Crocodylus niloticus" .
+<http://example.org/phyx.js/example#phylogeny0_node12> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node11> .
+<http://example.org/phyx.js/example#phylogeny0_node12> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node10> .
+<http://example.org/phyx.js/example#phylogeny0_node12> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b51 .
+<http://example.org/phyx.js/example#phylogeny0_node12> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node12> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b53 .
+<http://example.org/phyx.js/example#phylogeny0_node12> <http://www.w3.org/2000/01/rdf-schema#label> "Osteolaemus tetraspis" .
+<http://example.org/phyx.js/example#phylogeny0_node13> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node10> .
+<http://example.org/phyx.js/example#phylogeny0_node13> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node9> .
+<http://example.org/phyx.js/example#phylogeny0_node13> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b56 .
+<http://example.org/phyx.js/example#phylogeny0_node13> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node13> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b58 .
+<http://example.org/phyx.js/example#phylogeny0_node13> <http://www.w3.org/2000/01/rdf-schema#label> "Tomistoma schlegelii" .
+<http://example.org/phyx.js/example#phylogeny0_node14> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node9> .
+<http://example.org/phyx.js/example#phylogeny0_node14> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node15> .
+<http://example.org/phyx.js/example#phylogeny0_node14> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node18> .
+<http://example.org/phyx.js/example#phylogeny0_node14> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node8> .
+<http://example.org/phyx.js/example#phylogeny0_node14> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b61 .
+<http://example.org/phyx.js/example#phylogeny0_node14> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node14> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b63 .
+<http://example.org/phyx.js/example#phylogeny0_node14> <http://www.w3.org/2000/01/rdf-schema#label> "Alligatoroidea" .
+<http://example.org/phyx.js/example#phylogeny0_node15> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node18> .
+<http://example.org/phyx.js/example#phylogeny0_node15> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node16> .
+<http://example.org/phyx.js/example#phylogeny0_node15> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node17> .
+<http://example.org/phyx.js/example#phylogeny0_node15> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node14> .
+<http://example.org/phyx.js/example#phylogeny0_node15> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b66 .
+<http://example.org/phyx.js/example#phylogeny0_node15> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node15> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b68 .
+<http://example.org/phyx.js/example#phylogeny0_node15> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b71 .
+<http://example.org/phyx.js/example#phylogeny0_node15> <http://www.w3.org/2000/01/rdf-schema#label> "Alligatoridae" .
+<http://example.org/phyx.js/example#phylogeny0_node16> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node17> .
+<http://example.org/phyx.js/example#phylogeny0_node16> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node15> .
+<http://example.org/phyx.js/example#phylogeny0_node16> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b74 .
+<http://example.org/phyx.js/example#phylogeny0_node16> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node16> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b76 .
+<http://example.org/phyx.js/example#phylogeny0_node16> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b79 .
+<http://example.org/phyx.js/example#phylogeny0_node16> <http://www.w3.org/2000/01/rdf-schema#label> "Caiman crocodilus" .
+<http://example.org/phyx.js/example#phylogeny0_node17> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node16> .
+<http://example.org/phyx.js/example#phylogeny0_node17> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node15> .
+<http://example.org/phyx.js/example#phylogeny0_node17> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b82 .
+<http://example.org/phyx.js/example#phylogeny0_node17> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node17> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b84 .
+<http://example.org/phyx.js/example#phylogeny0_node17> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b87 .
+<http://example.org/phyx.js/example#phylogeny0_node17> <http://www.w3.org/2000/01/rdf-schema#label> "Alligator mississippiensis" .
+<http://example.org/phyx.js/example#phylogeny0_node18> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node15> .
+<http://example.org/phyx.js/example#phylogeny0_node18> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node14> .
+<http://example.org/phyx.js/example#phylogeny0_node18> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b90 .
+<http://example.org/phyx.js/example#phylogeny0_node18> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node18> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b92 .
+<http://example.org/phyx.js/example#phylogeny0_node18> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b95 .
+<http://example.org/phyx.js/example#phylogeny0_node18> <http://www.w3.org/2000/01/rdf-schema#label> "Diplocynodon ratelii" .
+<http://example.org/phyx.js/example#phylogeny0_node19> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node8> .
+<http://example.org/phyx.js/example#phylogeny0_node19> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node7> .
+<http://example.org/phyx.js/example#phylogeny0_node19> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b98 .
+<http://example.org/phyx.js/example#phylogeny0_node19> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node19> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b100 .
+<http://example.org/phyx.js/example#phylogeny0_node19> <http://www.w3.org/2000/01/rdf-schema#label> "Gavialis gangeticus" .
+<http://example.org/phyx.js/example#phylogeny0_node1> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node29> .
+<http://example.org/phyx.js/example#phylogeny0_node1> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node27> .
+<http://example.org/phyx.js/example#phylogeny0_node1> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node28> .
+<http://example.org/phyx.js/example#phylogeny0_node1> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node2> .
+<http://example.org/phyx.js/example#phylogeny0_node1> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node0> .
+<http://example.org/phyx.js/example#phylogeny0_node1> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node20> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node7> .
+<http://example.org/phyx.js/example#phylogeny0_node20> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node6> .
+<http://example.org/phyx.js/example#phylogeny0_node20> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b103 .
+<http://example.org/phyx.js/example#phylogeny0_node20> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node20> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b105 .
+<http://example.org/phyx.js/example#phylogeny0_node20> <http://www.w3.org/2000/01/rdf-schema#label> "Allodaposuchus" .
+<http://example.org/phyx.js/example#phylogeny0_node21> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node22> .
+<http://example.org/phyx.js/example#phylogeny0_node21> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node23> .
+<http://example.org/phyx.js/example#phylogeny0_node21> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node6> .
+<http://example.org/phyx.js/example#phylogeny0_node21> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node5> .
+<http://example.org/phyx.js/example#phylogeny0_node21> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b108 .
+<http://example.org/phyx.js/example#phylogeny0_node21> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node21> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b110 .
+<http://example.org/phyx.js/example#phylogeny0_node21> <http://www.w3.org/2000/01/rdf-schema#label> "Stomatosuchus" .
+<http://example.org/phyx.js/example#phylogeny0_node22> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node21> .
+<http://example.org/phyx.js/example#phylogeny0_node22> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node23> .
+<http://example.org/phyx.js/example#phylogeny0_node22> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node6> .
+<http://example.org/phyx.js/example#phylogeny0_node22> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node5> .
+<http://example.org/phyx.js/example#phylogeny0_node22> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b113 .
+<http://example.org/phyx.js/example#phylogeny0_node22> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node22> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b115 .
+<http://example.org/phyx.js/example#phylogeny0_node22> <http://www.w3.org/2000/01/rdf-schema#label> "Aegyptosuchus" .
+<http://example.org/phyx.js/example#phylogeny0_node23> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node21> .
+<http://example.org/phyx.js/example#phylogeny0_node23> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node22> .
+<http://example.org/phyx.js/example#phylogeny0_node23> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node6> .
+<http://example.org/phyx.js/example#phylogeny0_node23> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node5> .
+<http://example.org/phyx.js/example#phylogeny0_node23> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b118 .
+<http://example.org/phyx.js/example#phylogeny0_node23> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node23> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b120 .
+<http://example.org/phyx.js/example#phylogeny0_node23> <http://www.w3.org/2000/01/rdf-schema#label> "Hylaeochampsa" .
+<http://example.org/phyx.js/example#phylogeny0_node24> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node5> .
+<http://example.org/phyx.js/example#phylogeny0_node24> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node4> .
+<http://example.org/phyx.js/example#phylogeny0_node24> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node24> <http://www.w3.org/2000/01/rdf-schema#label> "mesosuchians" .
+<http://example.org/phyx.js/example#phylogeny0_node25> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node4> .
+<http://example.org/phyx.js/example#phylogeny0_node25> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node3> .
+<http://example.org/phyx.js/example#phylogeny0_node25> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node25> <http://www.w3.org/2000/01/rdf-schema#label> "protosuchians" .
+<http://example.org/phyx.js/example#phylogeny0_node26> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node3> .
+<http://example.org/phyx.js/example#phylogeny0_node26> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node2> .
+<http://example.org/phyx.js/example#phylogeny0_node26> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node26> <http://www.w3.org/2000/01/rdf-schema#label> "sphenosuchians" .
+<http://example.org/phyx.js/example#phylogeny0_node27> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node28> .
+<http://example.org/phyx.js/example#phylogeny0_node27> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node2> .
+<http://example.org/phyx.js/example#phylogeny0_node27> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node1> .
+<http://example.org/phyx.js/example#phylogeny0_node27> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b123 .
+<http://example.org/phyx.js/example#phylogeny0_node27> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node27> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b125 .
+<http://example.org/phyx.js/example#phylogeny0_node27> <http://www.w3.org/2000/01/rdf-schema#label> "Aetosauria" .
+<http://example.org/phyx.js/example#phylogeny0_node28> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node27> .
+<http://example.org/phyx.js/example#phylogeny0_node28> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node2> .
+<http://example.org/phyx.js/example#phylogeny0_node28> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node1> .
+<http://example.org/phyx.js/example#phylogeny0_node28> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node28> <http://www.w3.org/2000/01/rdf-schema#label> "rauisuchians" .
+<http://example.org/phyx.js/example#phylogeny0_node29> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node1> .
+<http://example.org/phyx.js/example#phylogeny0_node29> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node0> .
+<http://example.org/phyx.js/example#phylogeny0_node29> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b128 .
+<http://example.org/phyx.js/example#phylogeny0_node29> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node29> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b130 .
+<http://example.org/phyx.js/example#phylogeny0_node29> <http://www.w3.org/2000/01/rdf-schema#label> "Parasuchia" .
+<http://example.org/phyx.js/example#phylogeny0_node2> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node27> .
+<http://example.org/phyx.js/example#phylogeny0_node2> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node28> .
+<http://example.org/phyx.js/example#phylogeny0_node2> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node26> .
+<http://example.org/phyx.js/example#phylogeny0_node2> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node3> .
+<http://example.org/phyx.js/example#phylogeny0_node2> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node1> .
+<http://example.org/phyx.js/example#phylogeny0_node2> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b0 .
+<http://example.org/phyx.js/example#phylogeny0_node2> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node2> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b2 .
+<http://example.org/phyx.js/example#phylogeny0_node2> <http://www.w3.org/2000/01/rdf-schema#label> "Crocodylomorpha" .
+<http://example.org/phyx.js/example#phylogeny0_node3> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node26> .
+<http://example.org/phyx.js/example#phylogeny0_node3> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node25> .
+<http://example.org/phyx.js/example#phylogeny0_node3> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node4> .
+<http://example.org/phyx.js/example#phylogeny0_node3> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node2> .
+<http://example.org/phyx.js/example#phylogeny0_node3> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b5 .
+<http://example.org/phyx.js/example#phylogeny0_node3> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node3> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b7 .
+<http://example.org/phyx.js/example#phylogeny0_node3> <http://www.w3.org/2000/01/rdf-schema#label> "Crocodyliformes" .
+<http://example.org/phyx.js/example#phylogeny0_node4> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node25> .
+<http://example.org/phyx.js/example#phylogeny0_node4> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node24> .
+<http://example.org/phyx.js/example#phylogeny0_node4> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node5> .
+<http://example.org/phyx.js/example#phylogeny0_node4> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node3> .
+<http://example.org/phyx.js/example#phylogeny0_node4> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b10 .
+<http://example.org/phyx.js/example#phylogeny0_node4> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node4> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b12 .
+<http://example.org/phyx.js/example#phylogeny0_node4> <http://www.w3.org/2000/01/rdf-schema#label> "Mesoeucrocodylia" .
+<http://example.org/phyx.js/example#phylogeny0_node5> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node24> .
+<http://example.org/phyx.js/example#phylogeny0_node5> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node21> .
+<http://example.org/phyx.js/example#phylogeny0_node5> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node22> .
+<http://example.org/phyx.js/example#phylogeny0_node5> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node23> .
+<http://example.org/phyx.js/example#phylogeny0_node5> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node6> .
+<http://example.org/phyx.js/example#phylogeny0_node5> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node4> .
+<http://example.org/phyx.js/example#phylogeny0_node5> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b15 .
+<http://example.org/phyx.js/example#phylogeny0_node5> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node5> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b17 .
+<http://example.org/phyx.js/example#phylogeny0_node5> <http://www.w3.org/2000/01/rdf-schema#label> "Eusuchia" .
+<http://example.org/phyx.js/example#phylogeny0_node6> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node21> .
+<http://example.org/phyx.js/example#phylogeny0_node6> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node22> .
+<http://example.org/phyx.js/example#phylogeny0_node6> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node23> .
+<http://example.org/phyx.js/example#phylogeny0_node6> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node20> .
+<http://example.org/phyx.js/example#phylogeny0_node6> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node7> .
+<http://example.org/phyx.js/example#phylogeny0_node6> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node5> .
+<http://example.org/phyx.js/example#phylogeny0_node6> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node7> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node20> .
+<http://example.org/phyx.js/example#phylogeny0_node7> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node19> .
+<http://example.org/phyx.js/example#phylogeny0_node7> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node8> .
+<http://example.org/phyx.js/example#phylogeny0_node7> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node6> .
+<http://example.org/phyx.js/example#phylogeny0_node7> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b20 .
+<http://example.org/phyx.js/example#phylogeny0_node7> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node7> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b22 .
+<http://example.org/phyx.js/example#phylogeny0_node7> <http://www.w3.org/2000/01/rdf-schema#label> "Crocodylia" .
+<http://example.org/phyx.js/example#phylogeny0_node8> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node19> .
+<http://example.org/phyx.js/example#phylogeny0_node8> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node14> .
+<http://example.org/phyx.js/example#phylogeny0_node8> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node9> .
+<http://example.org/phyx.js/example#phylogeny0_node8> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node7> .
+<http://example.org/phyx.js/example#phylogeny0_node8> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b25 .
+<http://example.org/phyx.js/example#phylogeny0_node8> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node8> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b27 .
+<http://example.org/phyx.js/example#phylogeny0_node8> <http://www.w3.org/2000/01/rdf-schema#label> "Brevirostres" .
+<http://example.org/phyx.js/example#phylogeny0_node9> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node14> .
+<http://example.org/phyx.js/example#phylogeny0_node9> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node10> .
+<http://example.org/phyx.js/example#phylogeny0_node9> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node13> .
+<http://example.org/phyx.js/example#phylogeny0_node9> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node8> .
+<http://example.org/phyx.js/example#phylogeny0_node9> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b30 .
+<http://example.org/phyx.js/example#phylogeny0_node9> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node9> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b32 .
+<http://example.org/phyx.js/example#phylogeny0_node9> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b35 .
+<http://example.org/phyx.js/example#phylogeny0_node9> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b38 .
+<http://example.org/phyx.js/example#phylogeny0_node9> <http://www.w3.org/2000/01/rdf-schema#label> "Crocodylidae" .
+<http://example.org/phyx.js/example#phyloref0> <http://purl.obolibrary.org/obo/IAO_0000115> "Alligatoridae (Cuvier 1807).\n\nLast common ancestor of Alligator mississippiensis and Caiman crocodilus and all of its descendents." .
+<http://example.org/phyx.js/example#phyloref0> <http://purl.obolibrary.org/obo/IAO_0000119> _:b133 .
+<http://example.org/phyx.js/example#phyloref0> <http://purl.org/spar/pso/holdsStatusInTime> _:b134 .
+<http://example.org/phyx.js/example#phyloref0> <http://vocab.phyloref.org/phyloref/testcase.owl#internal_specifier> _:b136 .
+<http://example.org/phyx.js/example#phyloref0> <http://vocab.phyloref.org/phyloref/testcase.owl#internal_specifier> _:b138 .
+<http://example.org/phyx.js/example#phyloref0> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
+<http://example.org/phyx.js/example#phyloref0> <http://www.w3.org/2000/01/rdf-schema#label> "Alligatoridae" .
+<http://example.org/phyx.js/example#phyloref0> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#Phyloreference> .
+<http://example.org/phyx.js/example#phyloref0> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMinimumClade> .
+<http://example.org/phyx.js/example#phyloref0> <http://www.w3.org/2002/07/owl#equivalentClass> _:b140 .
+<http://example.org/phyx.js/example#phyloref1> <http://purl.obolibrary.org/obo/IAO_0000115> "Alligatorinae (Kälin 1940).\n\nAlligator mississippiensis and all crocodylians closer to it than to Caiman crocodilus." .
+<http://example.org/phyx.js/example#phyloref1> <http://purl.obolibrary.org/obo/IAO_0000119> _:b148 .
+<http://example.org/phyx.js/example#phyloref1> <http://purl.org/spar/pso/holdsStatusInTime> _:b149 .
+<http://example.org/phyx.js/example#phyloref1> <http://vocab.phyloref.org/phyloref/testcase.owl#external_specifier> _:b151 .
+<http://example.org/phyx.js/example#phyloref1> <http://vocab.phyloref.org/phyloref/testcase.owl#internal_specifier> _:b153 .
+<http://example.org/phyx.js/example#phyloref1> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
+<http://example.org/phyx.js/example#phyloref1> <http://www.w3.org/2000/01/rdf-schema#label> "Alligatorinae" .
+<http://example.org/phyx.js/example#phyloref1> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#Phyloreference> .
+<http://example.org/phyx.js/example#phyloref1> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMaximumClade> .
+<http://example.org/phyx.js/example#phyloref1> <http://www.w3.org/2002/07/owl#equivalentClass> _:b155 .
+<http://example.org/phyx.js/example#phyloref2> <http://purl.obolibrary.org/obo/IAO_0000115> "Caimaninae (Norell 1988).\n\nCaiman crocodilus and all crocodylians closer to it than to Alligator mississippiensis." .
+<http://example.org/phyx.js/example#phyloref2> <http://purl.obolibrary.org/obo/IAO_0000119> _:b162 .
+<http://example.org/phyx.js/example#phyloref2> <http://purl.org/spar/pso/holdsStatusInTime> _:b163 .
+<http://example.org/phyx.js/example#phyloref2> <http://vocab.phyloref.org/phyloref/testcase.owl#external_specifier> _:b165 .
+<http://example.org/phyx.js/example#phyloref2> <http://vocab.phyloref.org/phyloref/testcase.owl#internal_specifier> _:b167 .
+<http://example.org/phyx.js/example#phyloref2> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
+<http://example.org/phyx.js/example#phyloref2> <http://www.w3.org/2000/01/rdf-schema#label> "Caimaninae" .
+<http://example.org/phyx.js/example#phyloref2> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#Phyloreference> .
+<http://example.org/phyx.js/example#phyloref2> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMaximumClade> .
+<http://example.org/phyx.js/example#phyloref2> <http://www.w3.org/2002/07/owl#equivalentClass> _:b169 .
+<http://example.org/phyx.js/example#phyloref3> <http://purl.obolibrary.org/obo/IAO_0000115> "Crocodyloidea (Fitzinger 1826).\n\nCrocodylus niloticus and all crocodylians closer to it than to Alligator mississippiensis or Gavialis gangeticus." .
+<http://example.org/phyx.js/example#phyloref3> <http://purl.org/spar/pso/holdsStatusInTime> _:b176 .
+<http://example.org/phyx.js/example#phyloref3> <http://vocab.phyloref.org/phyloref/testcase.owl#external_specifier> _:b178 .
+<http://example.org/phyx.js/example#phyloref3> <http://vocab.phyloref.org/phyloref/testcase.owl#external_specifier> _:b180 .
+<http://example.org/phyx.js/example#phyloref3> <http://vocab.phyloref.org/phyloref/testcase.owl#has_component_class> <http://example.org/phyx.js/example#phyloref3_component1> .
+<http://example.org/phyx.js/example#phyloref3> <http://vocab.phyloref.org/phyloref/testcase.owl#has_component_class> <http://example.org/phyx.js/example#phyloref3_component2> .
+<http://example.org/phyx.js/example#phyloref3> <http://vocab.phyloref.org/phyloref/testcase.owl#has_component_class> <http://example.org/phyx.js/example#phyloref3_component3> .
+<http://example.org/phyx.js/example#phyloref3> <http://vocab.phyloref.org/phyloref/testcase.owl#has_component_class> <http://example.org/phyx.js/example#phyloref3_component4> .
+<http://example.org/phyx.js/example#phyloref3> <http://vocab.phyloref.org/phyloref/testcase.owl#has_component_class> <http://example.org/phyx.js/example#phyloref3_component5> .
+<http://example.org/phyx.js/example#phyloref3> <http://vocab.phyloref.org/phyloref/testcase.owl#has_component_class> <http://example.org/phyx.js/example#phyloref3_component6> .
+<http://example.org/phyx.js/example#phyloref3> <http://vocab.phyloref.org/phyloref/testcase.owl#internal_specifier> _:b214 .
+<http://example.org/phyx.js/example#phyloref3> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
+<http://example.org/phyx.js/example#phyloref3> <http://www.w3.org/2000/01/rdf-schema#label> "Crocodyloidea" .
+<http://example.org/phyx.js/example#phyloref3> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#Phyloreference> .
+<http://example.org/phyx.js/example#phyloref3> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMaximumClade> .
+<http://example.org/phyx.js/example#phyloref3_component1> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
+<http://example.org/phyx.js/example#phyloref3_component1> <http://www.w3.org/2000/01/rdf-schema#label> "(Crocodylus niloticus ~ Alligator mississippiensis)" .
+<http://example.org/phyx.js/example#phyloref3_component1> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMaximumClade> .
+<http://example.org/phyx.js/example#phyloref3_component1> <http://www.w3.org/2002/07/owl#equivalentClass> _:b182 .
+<http://example.org/phyx.js/example#phyloref3_component2> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
+<http://example.org/phyx.js/example#phyloref3_component2> <http://www.w3.org/2000/01/rdf-schema#label> "(Crocodylus niloticus ~ Gavialis gangeticus)" .
+<http://example.org/phyx.js/example#phyloref3_component2> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMaximumClade> .
+<http://example.org/phyx.js/example#phyloref3_component2> <http://www.w3.org/2002/07/owl#equivalentClass> _:b189 .
+<http://example.org/phyx.js/example#phyloref3_component3> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
+<http://example.org/phyx.js/example#phyloref3_component3> <http://www.w3.org/2000/01/rdf-schema#label> "(Crocodylus niloticus ~ Alligator mississippiensis V Gavialis gangeticus)" .
+<http://example.org/phyx.js/example#phyloref3_component3> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://example.org/phyx.js/example#phyloref3> .
+<http://example.org/phyx.js/example#phyloref3_component3> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMaximumClade> .
+<http://example.org/phyx.js/example#phyloref3_component3> <http://www.w3.org/2002/07/owl#equivalentClass> _:b196 .
+<http://example.org/phyx.js/example#phyloref3_component4> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
+<http://example.org/phyx.js/example#phyloref3_component4> <http://www.w3.org/2000/01/rdf-schema#label> "(Crocodylus niloticus ~ Alligator mississippiensis V Gavialis gangeticus)" .
+<http://example.org/phyx.js/example#phyloref3_component4> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://example.org/phyx.js/example#phyloref3> .
+<http://example.org/phyx.js/example#phyloref3_component4> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMaximumClade> .
+<http://example.org/phyx.js/example#phyloref3_component4> <http://www.w3.org/2002/07/owl#equivalentClass> _:b200 .
+<http://example.org/phyx.js/example#phyloref3_component5> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
+<http://example.org/phyx.js/example#phyloref3_component5> <http://www.w3.org/2000/01/rdf-schema#label> "(Crocodylus niloticus ~ Alligator mississippiensis V Gavialis gangeticus)" .
+<http://example.org/phyx.js/example#phyloref3_component5> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://example.org/phyx.js/example#phyloref3> .
+<http://example.org/phyx.js/example#phyloref3_component5> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMaximumClade> .
+<http://example.org/phyx.js/example#phyloref3_component5> <http://www.w3.org/2002/07/owl#equivalentClass> _:b205 .
+<http://example.org/phyx.js/example#phyloref3_component6> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
+<http://example.org/phyx.js/example#phyloref3_component6> <http://www.w3.org/2000/01/rdf-schema#label> "(Crocodylus niloticus ~ Alligator mississippiensis V Gavialis gangeticus)" .
+<http://example.org/phyx.js/example#phyloref3_component6> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://example.org/phyx.js/example#phyloref3> .
+<http://example.org/phyx.js/example#phyloref3_component6> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMaximumClade> .
+<http://example.org/phyx.js/example#phyloref3_component6> <http://www.w3.org/2002/07/owl#equivalentClass> _:b209 .
+<http://example.org/phyx.js/example#phyloref4> <http://purl.obolibrary.org/obo/IAO_0000115> "Crocodylidae (Cuvier 1807). Definition dependent on phylogenetic context.\n\nLast common ancestor of Crocodylus niloticus, Osteolaemus tetraspis, and Tomistoma schlegelii and all of its descendents." .
+<http://example.org/phyx.js/example#phyloref4> <http://purl.obolibrary.org/obo/IAO_0000119> _:b216 .
+<http://example.org/phyx.js/example#phyloref4> <http://purl.org/spar/pso/holdsStatusInTime> _:b217 .
+<http://example.org/phyx.js/example#phyloref4> <http://vocab.phyloref.org/phyloref/testcase.owl#has_component_class> <http://example.org/phyx.js/example#phyloref4_component1> .
+<http://example.org/phyx.js/example#phyloref4> <http://vocab.phyloref.org/phyloref/testcase.owl#has_component_class> <http://example.org/phyx.js/example#phyloref4_component2> .
+<http://example.org/phyx.js/example#phyloref4> <http://vocab.phyloref.org/phyloref/testcase.owl#has_component_class> <http://example.org/phyx.js/example#phyloref4_component3> .
+<http://example.org/phyx.js/example#phyloref4> <http://vocab.phyloref.org/phyloref/testcase.owl#has_component_class> <http://example.org/phyx.js/example#phyloref4_component4> .
+<http://example.org/phyx.js/example#phyloref4> <http://vocab.phyloref.org/phyloref/testcase.owl#has_component_class> <http://example.org/phyx.js/example#phyloref4_component5> .
+<http://example.org/phyx.js/example#phyloref4> <http://vocab.phyloref.org/phyloref/testcase.owl#has_component_class> <http://example.org/phyx.js/example#phyloref4_component6> .
+<http://example.org/phyx.js/example#phyloref4> <http://vocab.phyloref.org/phyloref/testcase.owl#has_component_class> <http://example.org/phyx.js/example#phyloref4_component7> .
+<http://example.org/phyx.js/example#phyloref4> <http://vocab.phyloref.org/phyloref/testcase.owl#has_component_class> <http://example.org/phyx.js/example#phyloref4_component8> .
+<http://example.org/phyx.js/example#phyloref4> <http://vocab.phyloref.org/phyloref/testcase.owl#has_component_class> <http://example.org/phyx.js/example#phyloref4_component9> .
+<http://example.org/phyx.js/example#phyloref4> <http://vocab.phyloref.org/phyloref/testcase.owl#internal_specifier> _:b345 .
+<http://example.org/phyx.js/example#phyloref4> <http://vocab.phyloref.org/phyloref/testcase.owl#internal_specifier> _:b347 .
+<http://example.org/phyx.js/example#phyloref4> <http://vocab.phyloref.org/phyloref/testcase.owl#internal_specifier> _:b349 .
+<http://example.org/phyx.js/example#phyloref4> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
+<http://example.org/phyx.js/example#phyloref4> <http://www.w3.org/2000/01/rdf-schema#label> "Crocodylidae" .
+<http://example.org/phyx.js/example#phyloref4> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#Phyloreference> .
+<http://example.org/phyx.js/example#phyloref4> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMinimumClade> .
+<http://example.org/phyx.js/example#phyloref4_component1> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
+<http://example.org/phyx.js/example#phyloref4_component1> <http://www.w3.org/2000/01/rdf-schema#label> "(Crocodylus niloticus & Osteolaemus tetraspis & Tomistoma schlegelii)" .
+<http://example.org/phyx.js/example#phyloref4_component1> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://example.org/phyx.js/example#phyloref4> .
+<http://example.org/phyx.js/example#phyloref4_component1> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMinimumClade> .
+<http://example.org/phyx.js/example#phyloref4_component1> <http://www.w3.org/2002/07/owl#equivalentClass> _:b219 .
+<http://example.org/phyx.js/example#phyloref4_component2> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
+<http://example.org/phyx.js/example#phyloref4_component2> <http://www.w3.org/2000/01/rdf-schema#label> "(Crocodylus niloticus & Osteolaemus tetraspis & Tomistoma schlegelii)" .
+<http://example.org/phyx.js/example#phyloref4_component2> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://example.org/phyx.js/example#phyloref4> .
+<http://example.org/phyx.js/example#phyloref4_component2> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMinimumClade> .
+<http://example.org/phyx.js/example#phyloref4_component2> <http://www.w3.org/2002/07/owl#equivalentClass> _:b233 .
+<http://example.org/phyx.js/example#phyloref4_component3> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
+<http://example.org/phyx.js/example#phyloref4_component3> <http://www.w3.org/2000/01/rdf-schema#label> "(Crocodylus niloticus & Osteolaemus tetraspis & Tomistoma schlegelii)" .
+<http://example.org/phyx.js/example#phyloref4_component3> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://example.org/phyx.js/example#phyloref4> .
+<http://example.org/phyx.js/example#phyloref4_component3> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMinimumClade> .
+<http://example.org/phyx.js/example#phyloref4_component3> <http://www.w3.org/2002/07/owl#equivalentClass> _:b247 .
+<http://example.org/phyx.js/example#phyloref4_component4> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
+<http://example.org/phyx.js/example#phyloref4_component4> <http://www.w3.org/2000/01/rdf-schema#label> "(Crocodylus niloticus & Osteolaemus tetraspis & Tomistoma schlegelii)" .
+<http://example.org/phyx.js/example#phyloref4_component4> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://example.org/phyx.js/example#phyloref4> .
+<http://example.org/phyx.js/example#phyloref4_component4> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMinimumClade> .
+<http://example.org/phyx.js/example#phyloref4_component4> <http://www.w3.org/2002/07/owl#equivalentClass> _:b261 .
+<http://example.org/phyx.js/example#phyloref4_component5> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
+<http://example.org/phyx.js/example#phyloref4_component5> <http://www.w3.org/2000/01/rdf-schema#label> "(Crocodylus niloticus & Osteolaemus tetraspis & Tomistoma schlegelii)" .
+<http://example.org/phyx.js/example#phyloref4_component5> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://example.org/phyx.js/example#phyloref4> .
+<http://example.org/phyx.js/example#phyloref4_component5> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMinimumClade> .
+<http://example.org/phyx.js/example#phyloref4_component5> <http://www.w3.org/2002/07/owl#equivalentClass> _:b275 .
+<http://example.org/phyx.js/example#phyloref4_component6> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
+<http://example.org/phyx.js/example#phyloref4_component6> <http://www.w3.org/2000/01/rdf-schema#label> "(Crocodylus niloticus & Osteolaemus tetraspis & Tomistoma schlegelii)" .
+<http://example.org/phyx.js/example#phyloref4_component6> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://example.org/phyx.js/example#phyloref4> .
+<http://example.org/phyx.js/example#phyloref4_component6> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMinimumClade> .
+<http://example.org/phyx.js/example#phyloref4_component6> <http://www.w3.org/2002/07/owl#equivalentClass> _:b289 .
+<http://example.org/phyx.js/example#phyloref4_component7> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
+<http://example.org/phyx.js/example#phyloref4_component7> <http://www.w3.org/2000/01/rdf-schema#label> "(Crocodylus niloticus & Osteolaemus tetraspis & Tomistoma schlegelii)" .
+<http://example.org/phyx.js/example#phyloref4_component7> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://example.org/phyx.js/example#phyloref4> .
+<http://example.org/phyx.js/example#phyloref4_component7> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMinimumClade> .
+<http://example.org/phyx.js/example#phyloref4_component7> <http://www.w3.org/2002/07/owl#equivalentClass> _:b303 .
+<http://example.org/phyx.js/example#phyloref4_component8> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
+<http://example.org/phyx.js/example#phyloref4_component8> <http://www.w3.org/2000/01/rdf-schema#label> "(Crocodylus niloticus & Osteolaemus tetraspis & Tomistoma schlegelii)" .
+<http://example.org/phyx.js/example#phyloref4_component8> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://example.org/phyx.js/example#phyloref4> .
+<http://example.org/phyx.js/example#phyloref4_component8> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMinimumClade> .
+<http://example.org/phyx.js/example#phyloref4_component8> <http://www.w3.org/2002/07/owl#equivalentClass> _:b317 .
+<http://example.org/phyx.js/example#phyloref4_component9> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
+<http://example.org/phyx.js/example#phyloref4_component9> <http://www.w3.org/2000/01/rdf-schema#label> "(Crocodylus niloticus & Osteolaemus tetraspis & Tomistoma schlegelii)" .
+<http://example.org/phyx.js/example#phyloref4_component9> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://example.org/phyx.js/example#phyloref4> .
+<http://example.org/phyx.js/example#phyloref4_component9> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMinimumClade> .
+<http://example.org/phyx.js/example#phyloref4_component9> <http://www.w3.org/2002/07/owl#equivalentClass> _:b331 .
+<http://example.org/phyx.js/example#phyloref5> <http://purl.obolibrary.org/obo/IAO_0000115> "Diplocynodontinae (Brochu 1999).\n\nDiplocynodon ratelii and all crocodylians closer to it than to Alligator mississippiensis." .
+<http://example.org/phyx.js/example#phyloref5> <http://purl.obolibrary.org/obo/IAO_0000119> _:b351 .
+<http://example.org/phyx.js/example#phyloref5> <http://purl.org/spar/pso/holdsStatusInTime> _:b352 .
+<http://example.org/phyx.js/example#phyloref5> <http://vocab.phyloref.org/phyloref/testcase.owl#external_specifier> _:b354 .
+<http://example.org/phyx.js/example#phyloref5> <http://vocab.phyloref.org/phyloref/testcase.owl#internal_specifier> _:b356 .
+<http://example.org/phyx.js/example#phyloref5> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
+<http://example.org/phyx.js/example#phyloref5> <http://www.w3.org/2000/01/rdf-schema#label> "Diplocynodontinae" .
+<http://example.org/phyx.js/example#phyloref5> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#Phyloreference> .
+<http://example.org/phyx.js/example#phyloref5> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMaximumClade> .
+<http://example.org/phyx.js/example#phyloref5> <http://www.w3.org/2002/07/owl#equivalentClass> _:b358 .
 _:b0 <http://rs.tdwg.org/ontology/voc/TaxonConcept#hasName> _:b1 .
 _:b0 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://rs.tdwg.org/ontology/voc/TaxonConcept#TaxonConcept> .
 _:b0 <http://www.w3.org/2000/01/rdf-schema#label> "Crocodylomorpha" .
@@ -1282,7 +1294,7 @@ _:b369 <http://www.w3.org/1999/02/22-rdf-syntax-ns#first> _:b170 .
 _:b369 <http://www.w3.org/1999/02/22-rdf-syntax-ns#rest> _:b370 .
 _:b37 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
 _:b37 <http://www.w3.org/2002/07/owl#onProperty> <http://purl.obolibrary.org/obo/OBI_0000293> .
-_:b37 <http://www.w3.org/2002/07/owl#someValuesFrom> <http://example.org/brochu_2003.json#phyloref3> .
+_:b37 <http://www.w3.org/2002/07/owl#someValuesFrom> <http://example.org/phyx.js/example#phyloref3> .
 _:b370 <http://www.w3.org/1999/02/22-rdf-syntax-ns#first> _:b173 .
 _:b370 <http://www.w3.org/1999/02/22-rdf-syntax-ns#rest> <http://www.w3.org/1999/02/22-rdf-syntax-ns#nil> .
 _:b371 <http://www.w3.org/1999/02/22-rdf-syntax-ns#first> _:b183 .
@@ -1293,22 +1305,22 @@ _:b373 <http://www.w3.org/1999/02/22-rdf-syntax-ns#first> _:b190 .
 _:b373 <http://www.w3.org/1999/02/22-rdf-syntax-ns#rest> _:b374 .
 _:b374 <http://www.w3.org/1999/02/22-rdf-syntax-ns#first> _:b193 .
 _:b374 <http://www.w3.org/1999/02/22-rdf-syntax-ns#rest> <http://www.w3.org/1999/02/22-rdf-syntax-ns#nil> .
-_:b375 <http://www.w3.org/1999/02/22-rdf-syntax-ns#first> <http://example.org/brochu_2003.json#phyloref3_component1> .
+_:b375 <http://www.w3.org/1999/02/22-rdf-syntax-ns#first> <http://example.org/phyx.js/example#phyloref3_component1> .
 _:b375 <http://www.w3.org/1999/02/22-rdf-syntax-ns#rest> _:b376 .
 _:b376 <http://www.w3.org/1999/02/22-rdf-syntax-ns#first> _:b197 .
 _:b376 <http://www.w3.org/1999/02/22-rdf-syntax-ns#rest> <http://www.w3.org/1999/02/22-rdf-syntax-ns#nil> .
-_:b377 <http://www.w3.org/1999/02/22-rdf-syntax-ns#first> <http://example.org/brochu_2003.json#phyloref3_component1> .
+_:b377 <http://www.w3.org/1999/02/22-rdf-syntax-ns#first> <http://example.org/phyx.js/example#phyloref3_component1> .
 _:b377 <http://www.w3.org/1999/02/22-rdf-syntax-ns#rest> _:b378 .
 _:b378 <http://www.w3.org/1999/02/22-rdf-syntax-ns#first> _:b201 .
 _:b378 <http://www.w3.org/1999/02/22-rdf-syntax-ns#rest> <http://www.w3.org/1999/02/22-rdf-syntax-ns#nil> .
-_:b379 <http://www.w3.org/1999/02/22-rdf-syntax-ns#first> <http://example.org/brochu_2003.json#phyloref3_component2> .
+_:b379 <http://www.w3.org/1999/02/22-rdf-syntax-ns#first> <http://example.org/phyx.js/example#phyloref3_component2> .
 _:b379 <http://www.w3.org/1999/02/22-rdf-syntax-ns#rest> _:b380 .
 _:b38 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
 _:b38 <http://www.w3.org/2002/07/owl#onProperty> <http://purl.obolibrary.org/obo/OBI_0000312> .
 _:b38 <http://www.w3.org/2002/07/owl#someValuesFrom> _:b39 .
 _:b380 <http://www.w3.org/1999/02/22-rdf-syntax-ns#first> _:b206 .
 _:b380 <http://www.w3.org/1999/02/22-rdf-syntax-ns#rest> <http://www.w3.org/1999/02/22-rdf-syntax-ns#nil> .
-_:b381 <http://www.w3.org/1999/02/22-rdf-syntax-ns#first> <http://example.org/brochu_2003.json#phyloref3_component2> .
+_:b381 <http://www.w3.org/1999/02/22-rdf-syntax-ns#first> <http://example.org/phyx.js/example#phyloref3_component2> .
 _:b381 <http://www.w3.org/1999/02/22-rdf-syntax-ns#rest> _:b382 .
 _:b382 <http://www.w3.org/1999/02/22-rdf-syntax-ns#first> _:b210 .
 _:b382 <http://www.w3.org/1999/02/22-rdf-syntax-ns#rest> <http://www.w3.org/1999/02/22-rdf-syntax-ns#nil> .
@@ -1353,7 +1365,7 @@ _:b4 <http://www.w3.org/2002/07/owl#hasValue> "Crocodylomorpha" .
 _:b4 <http://www.w3.org/2002/07/owl#onProperty> <http://rs.tdwg.org/ontology/voc/TaxonName#nameComplete> .
 _:b40 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
 _:b40 <http://www.w3.org/2002/07/owl#onProperty> <http://purl.obolibrary.org/obo/OBI_0000293> .
-_:b40 <http://www.w3.org/2002/07/owl#someValuesFrom> <http://example.org/brochu_2003.json#phyloref4> .
+_:b40 <http://www.w3.org/2002/07/owl#someValuesFrom> <http://example.org/phyx.js/example#phyloref4> .
 _:b400 <http://www.w3.org/1999/02/22-rdf-syntax-ns#first> _:b281 .
 _:b400 <http://www.w3.org/1999/02/22-rdf-syntax-ns#rest> <http://www.w3.org/1999/02/22-rdf-syntax-ns#nil> .
 _:b401 <http://www.w3.org/1999/02/22-rdf-syntax-ns#first> _:b283 .
@@ -1539,7 +1551,7 @@ _:b72 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/
 _:b72 <http://www.w3.org/2002/07/owl#intersectionOf> _:b425 .
 _:b73 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
 _:b73 <http://www.w3.org/2002/07/owl#onProperty> <http://purl.obolibrary.org/obo/OBI_0000293> .
-_:b73 <http://www.w3.org/2002/07/owl#someValuesFrom> <http://example.org/brochu_2003.json#phyloref0> .
+_:b73 <http://www.w3.org/2002/07/owl#someValuesFrom> <http://example.org/phyx.js/example#phyloref0> .
 _:b74 <http://rs.tdwg.org/ontology/voc/TaxonConcept#hasName> _:b75 .
 _:b74 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://rs.tdwg.org/ontology/voc/TaxonConcept#TaxonConcept> .
 _:b74 <http://www.w3.org/2000/01/rdf-schema#label> "Caiman crocodilus" .
@@ -1568,7 +1580,7 @@ _:b80 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/
 _:b80 <http://www.w3.org/2002/07/owl#intersectionOf> _:b427 .
 _:b81 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
 _:b81 <http://www.w3.org/2002/07/owl#onProperty> <http://purl.obolibrary.org/obo/OBI_0000293> .
-_:b81 <http://www.w3.org/2002/07/owl#someValuesFrom> <http://example.org/brochu_2003.json#phyloref2> .
+_:b81 <http://www.w3.org/2002/07/owl#someValuesFrom> <http://example.org/phyx.js/example#phyloref2> .
 _:b82 <http://rs.tdwg.org/ontology/voc/TaxonConcept#hasName> _:b83 .
 _:b82 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://rs.tdwg.org/ontology/voc/TaxonConcept#TaxonConcept> .
 _:b82 <http://www.w3.org/2000/01/rdf-schema#label> "Alligator mississippiensis" .
@@ -1594,7 +1606,7 @@ _:b88 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/
 _:b88 <http://www.w3.org/2002/07/owl#intersectionOf> _:b429 .
 _:b89 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
 _:b89 <http://www.w3.org/2002/07/owl#onProperty> <http://purl.obolibrary.org/obo/OBI_0000293> .
-_:b89 <http://www.w3.org/2002/07/owl#someValuesFrom> <http://example.org/brochu_2003.json#phyloref1> .
+_:b89 <http://www.w3.org/2002/07/owl#someValuesFrom> <http://example.org/phyx.js/example#phyloref1> .
 _:b9 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
 _:b9 <http://www.w3.org/2002/07/owl#hasValue> "Crocodyliformes" .
 _:b9 <http://www.w3.org/2002/07/owl#onProperty> <http://rs.tdwg.org/ontology/voc/TaxonName#nameComplete> .
@@ -1623,7 +1635,7 @@ _:b96 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/
 _:b96 <http://www.w3.org/2002/07/owl#intersectionOf> _:b431 .
 _:b97 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
 _:b97 <http://www.w3.org/2002/07/owl#onProperty> <http://purl.obolibrary.org/obo/OBI_0000293> .
-_:b97 <http://www.w3.org/2002/07/owl#someValuesFrom> <http://example.org/brochu_2003.json#phyloref5> .
+_:b97 <http://www.w3.org/2002/07/owl#someValuesFrom> <http://example.org/phyx.js/example#phyloref5> .
 _:b98 <http://rs.tdwg.org/ontology/voc/TaxonConcept#hasName> _:b99 .
 _:b98 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://rs.tdwg.org/ontology/voc/TaxonConcept#TaxonConcept> .
 _:b98 <http://www.w3.org/2000/01/rdf-schema#label> "Gavialis gangeticus" .
diff --git a/test/examples/correct/phyloref_as_specifier.json b/test/examples/correct/phyloref_as_specifier.json
new file mode 100644
index 00000000..08271c08
--- /dev/null
+++ b/test/examples/correct/phyloref_as_specifier.json
@@ -0,0 +1,49 @@
+{
+    "@context": "../../../docs/context/development/phyx.json",
+    "phylogenies": [{
+      "newick": "(((Aa_a, Bb_b)Phyloreference_as_specifier_example, (Cc_c, Dd_d)Specifier_phyloref), Ee_e);"
+    }],
+    "phylorefs": [
+        {
+          "@id": "#phyloref1",
+          "label": "Phyloreference as specifier example",
+          "definition": "The maximum clade that includes 'Aa a' but excludes phyloref 'Specifier phyloref' (#phyloref2), defined elsewhere in this file.",
+          "internalSpecifiers": [
+            {
+              "@type": "http://rs.tdwg.org/ontology/voc/TaxonConcept#TaxonConcept",
+              "hasName": {
+                "@type": "http://rs.tdwg.org/ontology/voc/TaxonName#TaxonName",
+                "nameComplete": "Aa a"
+              }
+            }
+          ],
+          "externalSpecifiers": [
+            {
+              "@id": "http://example.org/phyx.js/example#phyloref2",
+              "@type": "phyloref:Phyloreference"
+            }
+          ]
+        },
+        {
+          "@id": "http://example.org/phyx.js/example#phyloref2",
+          "label": "Specifier phyloref",
+          "definition": "Most recent common ancestor of 'Cc c' and 'Dd d'",
+          "internalSpecifiers": [
+            {
+              "@type": "http://rs.tdwg.org/ontology/voc/TaxonConcept#TaxonConcept",
+              "hasName": {
+                "@type": "http://rs.tdwg.org/ontology/voc/TaxonName#TaxonName",
+                "nameComplete": "Cc c"
+              }
+            },
+            {
+              "@type": "http://rs.tdwg.org/ontology/voc/TaxonConcept#TaxonConcept",
+              "hasName": {
+                "@type": "http://rs.tdwg.org/ontology/voc/TaxonName#TaxonName",
+                "nameComplete": "Dd d"
+              }
+            }
+          ]
+        }
+    ]
+}
diff --git a/test/examples/correct/phyloref_as_specifier.jsonld b/test/examples/correct/phyloref_as_specifier.jsonld
new file mode 100644
index 00000000..9d2f3fe9
--- /dev/null
+++ b/test/examples/correct/phyloref_as_specifier.jsonld
@@ -0,0 +1,472 @@
+{
+  "@context": "../../../docs/context/development/phyx.json",
+  "phylogenies": [
+    {
+      "newick": "(((Aa_a, Bb_b)Phyloreference_as_specifier_example, (Cc_c, Dd_d)Specifier_phyloref), Ee_e);",
+      "@id": "http://example.org/phyx.js/example#phylogeny0",
+      "@type": "testcase:PhyloreferenceTestPhylogeny",
+      "nodes": [
+        {
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node0",
+          "rdf:type": [
+            {
+              "@id": "obo:CDAO_0000140"
+            }
+          ],
+          "children": [
+            "http://example.org/phyx.js/example#phylogeny0_node1",
+            "http://example.org/phyx.js/example#phylogeny0_node2"
+          ]
+        },
+        {
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node1",
+          "rdf:type": [
+            {
+              "@id": "obo:CDAO_0000140"
+            },
+            {
+              "@type": "owl:Restriction",
+              "onProperty": "obo:CDAO_0000187",
+              "someValuesFrom": {
+                "@type": "owl:Restriction",
+                "onProperty": "http://rs.tdwg.org/ontology/voc/TaxonConcept#hasName",
+                "someValuesFrom": {
+                  "@type": "owl:Restriction",
+                  "onProperty": "http://rs.tdwg.org/ontology/voc/TaxonName#nameComplete",
+                  "hasValue": "Ee e"
+                }
+              }
+            }
+          ],
+          "labels": [
+            "Ee_e"
+          ],
+          "representsTaxonomicUnits": [
+            {
+              "@type": "http://rs.tdwg.org/ontology/voc/TaxonConcept#TaxonConcept",
+              "hasName": {
+                "@type": "http://rs.tdwg.org/ontology/voc/TaxonName#TaxonName",
+                "nomenclaturalCode": "http://purl.obolibrary.org/obo/NOMEN_0000036",
+                "label": "Ee_e",
+                "nameComplete": "Ee e",
+                "genusPart": "Ee",
+                "specificEpithet": "e"
+              },
+              "label": "Ee_e"
+            }
+          ],
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node0",
+          "siblings": [
+            "http://example.org/phyx.js/example#phylogeny0_node2"
+          ]
+        },
+        {
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node2",
+          "rdf:type": [
+            {
+              "@id": "obo:CDAO_0000140"
+            }
+          ],
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node0",
+          "siblings": [
+            "http://example.org/phyx.js/example#phylogeny0_node1"
+          ],
+          "children": [
+            "http://example.org/phyx.js/example#phylogeny0_node3",
+            "http://example.org/phyx.js/example#phylogeny0_node6"
+          ]
+        },
+        {
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node3",
+          "rdf:type": [
+            {
+              "@id": "obo:CDAO_0000140"
+            },
+            {
+              "@type": "owl:Restriction",
+              "onProperty": "obo:CDAO_0000187",
+              "someValuesFrom": {
+                "@type": "owl:Restriction",
+                "onProperty": "http://rs.tdwg.org/ontology/voc/TaxonConcept#hasName",
+                "someValuesFrom": {
+                  "@type": "owl:Restriction",
+                  "onProperty": "http://rs.tdwg.org/ontology/voc/TaxonName#nameComplete",
+                  "hasValue": "Specifier phyloref"
+                }
+              }
+            }
+          ],
+          "labels": [
+            "Specifier_phyloref"
+          ],
+          "representsTaxonomicUnits": [
+            {
+              "@type": "http://rs.tdwg.org/ontology/voc/TaxonConcept#TaxonConcept",
+              "hasName": {
+                "@type": "http://rs.tdwg.org/ontology/voc/TaxonName#TaxonName",
+                "nomenclaturalCode": "http://purl.obolibrary.org/obo/NOMEN_0000036",
+                "label": "Specifier_phyloref",
+                "nameComplete": "Specifier phyloref",
+                "genusPart": "Specifier",
+                "specificEpithet": "phyloref"
+              },
+              "label": "Specifier_phyloref"
+            }
+          ],
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node2",
+          "siblings": [
+            "http://example.org/phyx.js/example#phylogeny0_node6"
+          ],
+          "children": [
+            "http://example.org/phyx.js/example#phylogeny0_node4",
+            "http://example.org/phyx.js/example#phylogeny0_node5"
+          ]
+        },
+        {
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node4",
+          "rdf:type": [
+            {
+              "@id": "obo:CDAO_0000140"
+            },
+            {
+              "@type": "owl:Restriction",
+              "onProperty": "obo:CDAO_0000187",
+              "someValuesFrom": {
+                "@type": "owl:Restriction",
+                "onProperty": "http://rs.tdwg.org/ontology/voc/TaxonConcept#hasName",
+                "someValuesFrom": {
+                  "@type": "owl:Restriction",
+                  "onProperty": "http://rs.tdwg.org/ontology/voc/TaxonName#nameComplete",
+                  "hasValue": "Dd d"
+                }
+              }
+            }
+          ],
+          "labels": [
+            "Dd_d"
+          ],
+          "representsTaxonomicUnits": [
+            {
+              "@type": "http://rs.tdwg.org/ontology/voc/TaxonConcept#TaxonConcept",
+              "hasName": {
+                "@type": "http://rs.tdwg.org/ontology/voc/TaxonName#TaxonName",
+                "nomenclaturalCode": "http://purl.obolibrary.org/obo/NOMEN_0000036",
+                "label": "Dd_d",
+                "nameComplete": "Dd d",
+                "genusPart": "Dd",
+                "specificEpithet": "d"
+              },
+              "label": "Dd_d"
+            }
+          ],
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node3",
+          "siblings": [
+            "http://example.org/phyx.js/example#phylogeny0_node5"
+          ]
+        },
+        {
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node5",
+          "rdf:type": [
+            {
+              "@id": "obo:CDAO_0000140"
+            },
+            {
+              "@type": "owl:Restriction",
+              "onProperty": "obo:CDAO_0000187",
+              "someValuesFrom": {
+                "@type": "owl:Restriction",
+                "onProperty": "http://rs.tdwg.org/ontology/voc/TaxonConcept#hasName",
+                "someValuesFrom": {
+                  "@type": "owl:Restriction",
+                  "onProperty": "http://rs.tdwg.org/ontology/voc/TaxonName#nameComplete",
+                  "hasValue": "Cc c"
+                }
+              }
+            }
+          ],
+          "labels": [
+            "Cc_c"
+          ],
+          "representsTaxonomicUnits": [
+            {
+              "@type": "http://rs.tdwg.org/ontology/voc/TaxonConcept#TaxonConcept",
+              "hasName": {
+                "@type": "http://rs.tdwg.org/ontology/voc/TaxonName#TaxonName",
+                "nomenclaturalCode": "http://purl.obolibrary.org/obo/NOMEN_0000036",
+                "label": "Cc_c",
+                "nameComplete": "Cc c",
+                "genusPart": "Cc",
+                "specificEpithet": "c"
+              },
+              "label": "Cc_c"
+            }
+          ],
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node3",
+          "siblings": [
+            "http://example.org/phyx.js/example#phylogeny0_node4"
+          ]
+        },
+        {
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node6",
+          "rdf:type": [
+            {
+              "@id": "obo:CDAO_0000140"
+            },
+            {
+              "@type": "owl:Restriction",
+              "onProperty": "obo:CDAO_0000187",
+              "someValuesFrom": {
+                "@type": "owl:Restriction",
+                "onProperty": "http://rs.tdwg.org/ontology/voc/TaxonConcept#hasName",
+                "someValuesFrom": {
+                  "@type": "owl:Restriction",
+                  "onProperty": "http://rs.tdwg.org/ontology/voc/TaxonName#nameComplete",
+                  "hasValue": "Phyloreference as"
+                }
+              }
+            }
+          ],
+          "labels": [
+            "Phyloreference_as_specifier_example"
+          ],
+          "representsTaxonomicUnits": [
+            {
+              "@type": "http://rs.tdwg.org/ontology/voc/TaxonConcept#TaxonConcept",
+              "hasName": {
+                "@type": "http://rs.tdwg.org/ontology/voc/TaxonName#TaxonName",
+                "nomenclaturalCode": "http://purl.obolibrary.org/obo/NOMEN_0000036",
+                "label": "Phyloreference_as_specifier_example",
+                "nameComplete": "Phyloreference as",
+                "genusPart": "Phyloreference",
+                "specificEpithet": "as"
+              },
+              "label": "Phyloreference_as_specifier_example"
+            }
+          ],
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node2",
+          "siblings": [
+            "http://example.org/phyx.js/example#phylogeny0_node3"
+          ],
+          "children": [
+            "http://example.org/phyx.js/example#phylogeny0_node7",
+            "http://example.org/phyx.js/example#phylogeny0_node8"
+          ]
+        },
+        {
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node7",
+          "rdf:type": [
+            {
+              "@id": "obo:CDAO_0000140"
+            },
+            {
+              "@type": "owl:Restriction",
+              "onProperty": "obo:CDAO_0000187",
+              "someValuesFrom": {
+                "@type": "owl:Restriction",
+                "onProperty": "http://rs.tdwg.org/ontology/voc/TaxonConcept#hasName",
+                "someValuesFrom": {
+                  "@type": "owl:Restriction",
+                  "onProperty": "http://rs.tdwg.org/ontology/voc/TaxonName#nameComplete",
+                  "hasValue": "Bb b"
+                }
+              }
+            }
+          ],
+          "labels": [
+            "Bb_b"
+          ],
+          "representsTaxonomicUnits": [
+            {
+              "@type": "http://rs.tdwg.org/ontology/voc/TaxonConcept#TaxonConcept",
+              "hasName": {
+                "@type": "http://rs.tdwg.org/ontology/voc/TaxonName#TaxonName",
+                "nomenclaturalCode": "http://purl.obolibrary.org/obo/NOMEN_0000036",
+                "label": "Bb_b",
+                "nameComplete": "Bb b",
+                "genusPart": "Bb",
+                "specificEpithet": "b"
+              },
+              "label": "Bb_b"
+            }
+          ],
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node6",
+          "siblings": [
+            "http://example.org/phyx.js/example#phylogeny0_node8"
+          ]
+        },
+        {
+          "@id": "http://example.org/phyx.js/example#phylogeny0_node8",
+          "rdf:type": [
+            {
+              "@id": "obo:CDAO_0000140"
+            },
+            {
+              "@type": "owl:Restriction",
+              "onProperty": "obo:CDAO_0000187",
+              "someValuesFrom": {
+                "@type": "owl:Restriction",
+                "onProperty": "http://rs.tdwg.org/ontology/voc/TaxonConcept#hasName",
+                "someValuesFrom": {
+                  "@type": "owl:Restriction",
+                  "onProperty": "http://rs.tdwg.org/ontology/voc/TaxonName#nameComplete",
+                  "hasValue": "Aa a"
+                }
+              }
+            }
+          ],
+          "labels": [
+            "Aa_a"
+          ],
+          "representsTaxonomicUnits": [
+            {
+              "@type": "http://rs.tdwg.org/ontology/voc/TaxonConcept#TaxonConcept",
+              "hasName": {
+                "@type": "http://rs.tdwg.org/ontology/voc/TaxonName#TaxonName",
+                "nomenclaturalCode": "http://purl.obolibrary.org/obo/NOMEN_0000036",
+                "label": "Aa_a",
+                "nameComplete": "Aa a",
+                "genusPart": "Aa",
+                "specificEpithet": "a"
+              },
+              "label": "Aa_a"
+            }
+          ],
+          "parent": "http://example.org/phyx.js/example#phylogeny0_node6",
+          "siblings": [
+            "http://example.org/phyx.js/example#phylogeny0_node7"
+          ]
+        }
+      ],
+      "hasRootNode": {
+        "@id": "http://example.org/phyx.js/example#phylogeny0_node0"
+      }
+    }
+  ],
+  "phylorefs": [
+    {
+      "@id": "http://example.org/phyx.js/example#phyloref1",
+      "label": "Phyloreference as specifier example",
+      "definition": "The maximum clade that includes 'Aa a' but excludes phyloref 'Specifier phyloref' (#phyloref2), defined elsewhere in this file.",
+      "internalSpecifiers": [
+        {
+          "@type": "http://rs.tdwg.org/ontology/voc/TaxonConcept#TaxonConcept",
+          "hasName": {
+            "@type": "http://rs.tdwg.org/ontology/voc/TaxonName#TaxonName",
+            "nameComplete": "Aa a"
+          }
+        }
+      ],
+      "externalSpecifiers": [
+        {
+          "@id": "http://example.org/phyx.js/example#phyloref2",
+          "@type": "phyloref:Phyloreference"
+        }
+      ],
+      "@type": "owl:Class",
+      "hasComponentClass": [],
+      "equivalentClass": {
+        "@type": "owl:Class",
+        "intersectionOf": [
+          {
+            "@type": "owl:Restriction",
+            "onProperty": "phyloref:includes_TU",
+            "someValuesFrom": {
+              "@type": "owl:Restriction",
+              "onProperty": "http://rs.tdwg.org/ontology/voc/TaxonConcept#hasName",
+              "someValuesFrom": {
+                "@type": "owl:Restriction",
+                "onProperty": "http://rs.tdwg.org/ontology/voc/TaxonName#nameComplete",
+                "hasValue": "Aa a"
+              }
+            }
+          },
+          {
+            "@type": "owl:Restriction",
+            "onProperty": "phyloref:excludes_lineage_to",
+            "someValuesFrom": {
+              "@id": "http://example.org/phyx.js/example#phyloref2",
+              "@type": "phyloref:Phyloreference"
+            }
+          }
+        ]
+      },
+      "subClassOf": [
+        "phyloref:Phyloreference",
+        "phyloref:PhyloreferenceUsingMaximumClade"
+      ]
+    },
+    {
+      "@id": "http://example.org/phyx.js/example#phyloref2",
+      "label": "Specifier phyloref",
+      "definition": "Most recent common ancestor of 'Cc c' and 'Dd d'",
+      "internalSpecifiers": [
+        {
+          "@type": "http://rs.tdwg.org/ontology/voc/TaxonConcept#TaxonConcept",
+          "hasName": {
+            "@type": "http://rs.tdwg.org/ontology/voc/TaxonName#TaxonName",
+            "nameComplete": "Cc c"
+          }
+        },
+        {
+          "@type": "http://rs.tdwg.org/ontology/voc/TaxonConcept#TaxonConcept",
+          "hasName": {
+            "@type": "http://rs.tdwg.org/ontology/voc/TaxonName#TaxonName",
+            "nameComplete": "Dd d"
+          }
+        }
+      ],
+      "@type": "owl:Class",
+      "hasComponentClass": [],
+      "equivalentClass": {
+        "@type": "owl:Restriction",
+        "onProperty": "obo:CDAO_0000149",
+        "someValuesFrom": {
+          "@type": "owl:Class",
+          "intersectionOf": [
+            {
+              "@type": "owl:Restriction",
+              "onProperty": "phyloref:excludes_TU",
+              "someValuesFrom": {
+                "@type": "owl:Restriction",
+                "onProperty": "http://rs.tdwg.org/ontology/voc/TaxonConcept#hasName",
+                "someValuesFrom": {
+                  "@type": "owl:Restriction",
+                  "onProperty": "http://rs.tdwg.org/ontology/voc/TaxonName#nameComplete",
+                  "hasValue": "Cc c"
+                }
+              }
+            },
+            {
+              "@type": "owl:Restriction",
+              "onProperty": "phyloref:includes_TU",
+              "someValuesFrom": {
+                "@type": "owl:Restriction",
+                "onProperty": "http://rs.tdwg.org/ontology/voc/TaxonConcept#hasName",
+                "someValuesFrom": {
+                  "@type": "owl:Restriction",
+                  "onProperty": "http://rs.tdwg.org/ontology/voc/TaxonName#nameComplete",
+                  "hasValue": "Dd d"
+                }
+              }
+            }
+          ]
+        }
+      },
+      "subClassOf": [
+        "phyloref:Phyloreference",
+        "phyloref:PhyloreferenceUsingMinimumClade"
+      ]
+    }
+  ],
+  "hasTaxonomicUnitMatches": [],
+  "@id": "http://example.org/phyx.js/example#",
+  "@type": [
+    "testcase:PhyloreferenceTestCase",
+    "owl:Ontology"
+  ],
+  "owl:imports": [
+    "http://raw.githubusercontent.com/phyloref/curation-workflow/develop/ontologies/phyloref_testcase.owl",
+    "http://ontology.phyloref.org/2018-12-14/phyloref.owl",
+    "http://ontology.phyloref.org/2018-12-14/tcan.owl"
+  ]
+}
\ No newline at end of file
diff --git a/test/examples/correct/phyloref_as_specifier.nq b/test/examples/correct/phyloref_as_specifier.nq
new file mode 100644
index 00000000..a9c3cb64
--- /dev/null
+++ b/test/examples/correct/phyloref_as_specifier.nq
@@ -0,0 +1,274 @@
+<http://example.org/phyx.js/example#> <http://vocab.phyloref.org/phyloref/testcase.owl#has_phylogeny> <http://example.org/phyx.js/example#phylogeny0> .
+<http://example.org/phyx.js/example#> <http://vocab.phyloref.org/phyloref/testcase.owl#has_phyloreference> <http://example.org/phyx.js/example#phyloref1> .
+<http://example.org/phyx.js/example#> <http://vocab.phyloref.org/phyloref/testcase.owl#has_phyloreference> <http://example.org/phyx.js/example#phyloref2> .
+<http://example.org/phyx.js/example#> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://vocab.phyloref.org/phyloref/testcase.owl#PhyloreferenceTestCase> .
+<http://example.org/phyx.js/example#> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Ontology> .
+<http://example.org/phyx.js/example#> <http://www.w3.org/2002/07/owl#imports> <http://ontology.phyloref.org/2018-12-14/phyloref.owl> .
+<http://example.org/phyx.js/example#> <http://www.w3.org/2002/07/owl#imports> <http://ontology.phyloref.org/2018-12-14/tcan.owl> .
+<http://example.org/phyx.js/example#> <http://www.w3.org/2002/07/owl#imports> <http://raw.githubusercontent.com/phyloref/curation-workflow/develop/ontologies/phyloref_testcase.owl> .
+<http://example.org/phyx.js/example#phylogeny0> <http://ontology.phyloref.org/phyloref.owl#newick_expression> "(((Aa_a, Bb_b)Phyloreference_as_specifier_example, (Cc_c, Dd_d)Specifier_phyloref), Ee_e);" .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node0> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node1> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node2> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node3> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node4> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node5> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node6> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node7> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_node> <http://example.org/phyx.js/example#phylogeny0_node8> .
+<http://example.org/phyx.js/example#phylogeny0> <http://vocab.phyloref.org/phyloref/testcase.owl#has_root_node> <http://example.org/phyx.js/example#phylogeny0_node0> .
+<http://example.org/phyx.js/example#phylogeny0> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://vocab.phyloref.org/phyloref/testcase.owl#PhyloreferenceTestPhylogeny> .
+<http://example.org/phyx.js/example#phylogeny0_node0> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node1> .
+<http://example.org/phyx.js/example#phylogeny0_node0> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node2> .
+<http://example.org/phyx.js/example#phylogeny0_node0> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node1> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node2> .
+<http://example.org/phyx.js/example#phylogeny0_node1> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node0> .
+<http://example.org/phyx.js/example#phylogeny0_node1> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b0 .
+<http://example.org/phyx.js/example#phylogeny0_node1> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node1> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b2 .
+<http://example.org/phyx.js/example#phylogeny0_node1> <http://www.w3.org/2000/01/rdf-schema#label> "Ee_e" .
+<http://example.org/phyx.js/example#phylogeny0_node2> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node1> .
+<http://example.org/phyx.js/example#phylogeny0_node2> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node3> .
+<http://example.org/phyx.js/example#phylogeny0_node2> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node6> .
+<http://example.org/phyx.js/example#phylogeny0_node2> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node0> .
+<http://example.org/phyx.js/example#phylogeny0_node2> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node3> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node6> .
+<http://example.org/phyx.js/example#phylogeny0_node3> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node4> .
+<http://example.org/phyx.js/example#phylogeny0_node3> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node5> .
+<http://example.org/phyx.js/example#phylogeny0_node3> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node2> .
+<http://example.org/phyx.js/example#phylogeny0_node3> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b5 .
+<http://example.org/phyx.js/example#phylogeny0_node3> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node3> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b7 .
+<http://example.org/phyx.js/example#phylogeny0_node3> <http://www.w3.org/2000/01/rdf-schema#label> "Specifier_phyloref" .
+<http://example.org/phyx.js/example#phylogeny0_node4> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node5> .
+<http://example.org/phyx.js/example#phylogeny0_node4> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node3> .
+<http://example.org/phyx.js/example#phylogeny0_node4> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b10 .
+<http://example.org/phyx.js/example#phylogeny0_node4> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node4> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b12 .
+<http://example.org/phyx.js/example#phylogeny0_node4> <http://www.w3.org/2000/01/rdf-schema#label> "Dd_d" .
+<http://example.org/phyx.js/example#phylogeny0_node5> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node4> .
+<http://example.org/phyx.js/example#phylogeny0_node5> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node3> .
+<http://example.org/phyx.js/example#phylogeny0_node5> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b15 .
+<http://example.org/phyx.js/example#phylogeny0_node5> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node5> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b17 .
+<http://example.org/phyx.js/example#phylogeny0_node5> <http://www.w3.org/2000/01/rdf-schema#label> "Cc_c" .
+<http://example.org/phyx.js/example#phylogeny0_node6> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node3> .
+<http://example.org/phyx.js/example#phylogeny0_node6> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node7> .
+<http://example.org/phyx.js/example#phylogeny0_node6> <http://purl.obolibrary.org/obo/CDAO_0000149> <http://example.org/phyx.js/example#phylogeny0_node8> .
+<http://example.org/phyx.js/example#phylogeny0_node6> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node2> .
+<http://example.org/phyx.js/example#phylogeny0_node6> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b20 .
+<http://example.org/phyx.js/example#phylogeny0_node6> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node6> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b22 .
+<http://example.org/phyx.js/example#phylogeny0_node6> <http://www.w3.org/2000/01/rdf-schema#label> "Phyloreference_as_specifier_example" .
+<http://example.org/phyx.js/example#phylogeny0_node7> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node8> .
+<http://example.org/phyx.js/example#phylogeny0_node7> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node6> .
+<http://example.org/phyx.js/example#phylogeny0_node7> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b25 .
+<http://example.org/phyx.js/example#phylogeny0_node7> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node7> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b27 .
+<http://example.org/phyx.js/example#phylogeny0_node7> <http://www.w3.org/2000/01/rdf-schema#label> "Bb_b" .
+<http://example.org/phyx.js/example#phylogeny0_node8> <http://ontology.phyloref.org/phyloref.owl#has_Sibling> <http://example.org/phyx.js/example#phylogeny0_node7> .
+<http://example.org/phyx.js/example#phylogeny0_node8> <http://purl.obolibrary.org/obo/CDAO_0000179> <http://example.org/phyx.js/example#phylogeny0_node6> .
+<http://example.org/phyx.js/example#phylogeny0_node8> <http://purl.obolibrary.org/obo/CDAO_0000187> _:b30 .
+<http://example.org/phyx.js/example#phylogeny0_node8> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/CDAO_0000140> .
+<http://example.org/phyx.js/example#phylogeny0_node8> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> _:b32 .
+<http://example.org/phyx.js/example#phylogeny0_node8> <http://www.w3.org/2000/01/rdf-schema#label> "Aa_a" .
+<http://example.org/phyx.js/example#phyloref1> <http://purl.obolibrary.org/obo/IAO_0000115> "The maximum clade that includes 'Aa a' but excludes phyloref 'Specifier phyloref' (#phyloref2), defined elsewhere in this file." .
+<http://example.org/phyx.js/example#phyloref1> <http://vocab.phyloref.org/phyloref/testcase.owl#external_specifier> <http://example.org/phyx.js/example#phyloref2> .
+<http://example.org/phyx.js/example#phyloref1> <http://vocab.phyloref.org/phyloref/testcase.owl#internal_specifier> _:b35 .
+<http://example.org/phyx.js/example#phyloref1> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
+<http://example.org/phyx.js/example#phyloref1> <http://www.w3.org/2000/01/rdf-schema#label> "Phyloreference as specifier example" .
+<http://example.org/phyx.js/example#phyloref1> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#Phyloreference> .
+<http://example.org/phyx.js/example#phyloref1> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMaximumClade> .
+<http://example.org/phyx.js/example#phyloref1> <http://www.w3.org/2002/07/owl#equivalentClass> _:b37 .
+<http://example.org/phyx.js/example#phyloref2> <http://purl.obolibrary.org/obo/IAO_0000115> "Most recent common ancestor of 'Cc c' and 'Dd d'" .
+<http://example.org/phyx.js/example#phyloref2> <http://vocab.phyloref.org/phyloref/testcase.owl#internal_specifier> _:b42 .
+<http://example.org/phyx.js/example#phyloref2> <http://vocab.phyloref.org/phyloref/testcase.owl#internal_specifier> _:b44 .
+<http://example.org/phyx.js/example#phyloref2> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://ontology.phyloref.org/phyloref.owl#Phyloreference> .
+<http://example.org/phyx.js/example#phyloref2> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
+<http://example.org/phyx.js/example#phyloref2> <http://www.w3.org/2000/01/rdf-schema#label> "Specifier phyloref" .
+<http://example.org/phyx.js/example#phyloref2> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#Phyloreference> .
+<http://example.org/phyx.js/example#phyloref2> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingMinimumClade> .
+<http://example.org/phyx.js/example#phyloref2> <http://www.w3.org/2002/07/owl#equivalentClass> _:b46 .
+_:b0 <http://rs.tdwg.org/ontology/voc/TaxonConcept#hasName> _:b1 .
+_:b0 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://rs.tdwg.org/ontology/voc/TaxonConcept#TaxonConcept> .
+_:b0 <http://www.w3.org/2000/01/rdf-schema#label> "Ee_e" .
+_:b1 <http://rs.tdwg.org/ontology/voc/TaxonName#genusPart> "Ee" .
+_:b1 <http://rs.tdwg.org/ontology/voc/TaxonName#nameComplete> "Ee e" .
+_:b1 <http://rs.tdwg.org/ontology/voc/TaxonName#nomenclaturalCode> <http://purl.obolibrary.org/obo/NOMEN_0000036> .
+_:b1 <http://rs.tdwg.org/ontology/voc/TaxonName#specificEpithet> "e" .
+_:b1 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://rs.tdwg.org/ontology/voc/TaxonName#TaxonName> .
+_:b1 <http://www.w3.org/2000/01/rdf-schema#label> "Ee_e" .
+_:b10 <http://rs.tdwg.org/ontology/voc/TaxonConcept#hasName> _:b11 .
+_:b10 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://rs.tdwg.org/ontology/voc/TaxonConcept#TaxonConcept> .
+_:b10 <http://www.w3.org/2000/01/rdf-schema#label> "Dd_d" .
+_:b11 <http://rs.tdwg.org/ontology/voc/TaxonName#genusPart> "Dd" .
+_:b11 <http://rs.tdwg.org/ontology/voc/TaxonName#nameComplete> "Dd d" .
+_:b11 <http://rs.tdwg.org/ontology/voc/TaxonName#nomenclaturalCode> <http://purl.obolibrary.org/obo/NOMEN_0000036> .
+_:b11 <http://rs.tdwg.org/ontology/voc/TaxonName#specificEpithet> "d" .
+_:b11 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://rs.tdwg.org/ontology/voc/TaxonName#TaxonName> .
+_:b11 <http://www.w3.org/2000/01/rdf-schema#label> "Dd_d" .
+_:b12 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
+_:b12 <http://www.w3.org/2002/07/owl#onProperty> <http://purl.obolibrary.org/obo/CDAO_0000187> .
+_:b12 <http://www.w3.org/2002/07/owl#someValuesFrom> _:b13 .
+_:b13 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
+_:b13 <http://www.w3.org/2002/07/owl#onProperty> <http://rs.tdwg.org/ontology/voc/TaxonConcept#hasName> .
+_:b13 <http://www.w3.org/2002/07/owl#someValuesFrom> _:b14 .
+_:b14 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
+_:b14 <http://www.w3.org/2002/07/owl#hasValue> "Dd d" .
+_:b14 <http://www.w3.org/2002/07/owl#onProperty> <http://rs.tdwg.org/ontology/voc/TaxonName#nameComplete> .
+_:b15 <http://rs.tdwg.org/ontology/voc/TaxonConcept#hasName> _:b16 .
+_:b15 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://rs.tdwg.org/ontology/voc/TaxonConcept#TaxonConcept> .
+_:b15 <http://www.w3.org/2000/01/rdf-schema#label> "Cc_c" .
+_:b16 <http://rs.tdwg.org/ontology/voc/TaxonName#genusPart> "Cc" .
+_:b16 <http://rs.tdwg.org/ontology/voc/TaxonName#nameComplete> "Cc c" .
+_:b16 <http://rs.tdwg.org/ontology/voc/TaxonName#nomenclaturalCode> <http://purl.obolibrary.org/obo/NOMEN_0000036> .
+_:b16 <http://rs.tdwg.org/ontology/voc/TaxonName#specificEpithet> "c" .
+_:b16 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://rs.tdwg.org/ontology/voc/TaxonName#TaxonName> .
+_:b16 <http://www.w3.org/2000/01/rdf-schema#label> "Cc_c" .
+_:b17 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
+_:b17 <http://www.w3.org/2002/07/owl#onProperty> <http://purl.obolibrary.org/obo/CDAO_0000187> .
+_:b17 <http://www.w3.org/2002/07/owl#someValuesFrom> _:b18 .
+_:b18 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
+_:b18 <http://www.w3.org/2002/07/owl#onProperty> <http://rs.tdwg.org/ontology/voc/TaxonConcept#hasName> .
+_:b18 <http://www.w3.org/2002/07/owl#someValuesFrom> _:b19 .
+_:b19 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
+_:b19 <http://www.w3.org/2002/07/owl#hasValue> "Cc c" .
+_:b19 <http://www.w3.org/2002/07/owl#onProperty> <http://rs.tdwg.org/ontology/voc/TaxonName#nameComplete> .
+_:b2 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
+_:b2 <http://www.w3.org/2002/07/owl#onProperty> <http://purl.obolibrary.org/obo/CDAO_0000187> .
+_:b2 <http://www.w3.org/2002/07/owl#someValuesFrom> _:b3 .
+_:b20 <http://rs.tdwg.org/ontology/voc/TaxonConcept#hasName> _:b21 .
+_:b20 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://rs.tdwg.org/ontology/voc/TaxonConcept#TaxonConcept> .
+_:b20 <http://www.w3.org/2000/01/rdf-schema#label> "Phyloreference_as_specifier_example" .
+_:b21 <http://rs.tdwg.org/ontology/voc/TaxonName#genusPart> "Phyloreference" .
+_:b21 <http://rs.tdwg.org/ontology/voc/TaxonName#nameComplete> "Phyloreference as" .
+_:b21 <http://rs.tdwg.org/ontology/voc/TaxonName#nomenclaturalCode> <http://purl.obolibrary.org/obo/NOMEN_0000036> .
+_:b21 <http://rs.tdwg.org/ontology/voc/TaxonName#specificEpithet> "as" .
+_:b21 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://rs.tdwg.org/ontology/voc/TaxonName#TaxonName> .
+_:b21 <http://www.w3.org/2000/01/rdf-schema#label> "Phyloreference_as_specifier_example" .
+_:b22 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
+_:b22 <http://www.w3.org/2002/07/owl#onProperty> <http://purl.obolibrary.org/obo/CDAO_0000187> .
+_:b22 <http://www.w3.org/2002/07/owl#someValuesFrom> _:b23 .
+_:b23 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
+_:b23 <http://www.w3.org/2002/07/owl#onProperty> <http://rs.tdwg.org/ontology/voc/TaxonConcept#hasName> .
+_:b23 <http://www.w3.org/2002/07/owl#someValuesFrom> _:b24 .
+_:b24 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
+_:b24 <http://www.w3.org/2002/07/owl#hasValue> "Phyloreference as" .
+_:b24 <http://www.w3.org/2002/07/owl#onProperty> <http://rs.tdwg.org/ontology/voc/TaxonName#nameComplete> .
+_:b25 <http://rs.tdwg.org/ontology/voc/TaxonConcept#hasName> _:b26 .
+_:b25 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://rs.tdwg.org/ontology/voc/TaxonConcept#TaxonConcept> .
+_:b25 <http://www.w3.org/2000/01/rdf-schema#label> "Bb_b" .
+_:b26 <http://rs.tdwg.org/ontology/voc/TaxonName#genusPart> "Bb" .
+_:b26 <http://rs.tdwg.org/ontology/voc/TaxonName#nameComplete> "Bb b" .
+_:b26 <http://rs.tdwg.org/ontology/voc/TaxonName#nomenclaturalCode> <http://purl.obolibrary.org/obo/NOMEN_0000036> .
+_:b26 <http://rs.tdwg.org/ontology/voc/TaxonName#specificEpithet> "b" .
+_:b26 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://rs.tdwg.org/ontology/voc/TaxonName#TaxonName> .
+_:b26 <http://www.w3.org/2000/01/rdf-schema#label> "Bb_b" .
+_:b27 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
+_:b27 <http://www.w3.org/2002/07/owl#onProperty> <http://purl.obolibrary.org/obo/CDAO_0000187> .
+_:b27 <http://www.w3.org/2002/07/owl#someValuesFrom> _:b28 .
+_:b28 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
+_:b28 <http://www.w3.org/2002/07/owl#onProperty> <http://rs.tdwg.org/ontology/voc/TaxonConcept#hasName> .
+_:b28 <http://www.w3.org/2002/07/owl#someValuesFrom> _:b29 .
+_:b29 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
+_:b29 <http://www.w3.org/2002/07/owl#hasValue> "Bb b" .
+_:b29 <http://www.w3.org/2002/07/owl#onProperty> <http://rs.tdwg.org/ontology/voc/TaxonName#nameComplete> .
+_:b3 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
+_:b3 <http://www.w3.org/2002/07/owl#onProperty> <http://rs.tdwg.org/ontology/voc/TaxonConcept#hasName> .
+_:b3 <http://www.w3.org/2002/07/owl#someValuesFrom> _:b4 .
+_:b30 <http://rs.tdwg.org/ontology/voc/TaxonConcept#hasName> _:b31 .
+_:b30 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://rs.tdwg.org/ontology/voc/TaxonConcept#TaxonConcept> .
+_:b30 <http://www.w3.org/2000/01/rdf-schema#label> "Aa_a" .
+_:b31 <http://rs.tdwg.org/ontology/voc/TaxonName#genusPart> "Aa" .
+_:b31 <http://rs.tdwg.org/ontology/voc/TaxonName#nameComplete> "Aa a" .
+_:b31 <http://rs.tdwg.org/ontology/voc/TaxonName#nomenclaturalCode> <http://purl.obolibrary.org/obo/NOMEN_0000036> .
+_:b31 <http://rs.tdwg.org/ontology/voc/TaxonName#specificEpithet> "a" .
+_:b31 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://rs.tdwg.org/ontology/voc/TaxonName#TaxonName> .
+_:b31 <http://www.w3.org/2000/01/rdf-schema#label> "Aa_a" .
+_:b32 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
+_:b32 <http://www.w3.org/2002/07/owl#onProperty> <http://purl.obolibrary.org/obo/CDAO_0000187> .
+_:b32 <http://www.w3.org/2002/07/owl#someValuesFrom> _:b33 .
+_:b33 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
+_:b33 <http://www.w3.org/2002/07/owl#onProperty> <http://rs.tdwg.org/ontology/voc/TaxonConcept#hasName> .
+_:b33 <http://www.w3.org/2002/07/owl#someValuesFrom> _:b34 .
+_:b34 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
+_:b34 <http://www.w3.org/2002/07/owl#hasValue> "Aa a" .
+_:b34 <http://www.w3.org/2002/07/owl#onProperty> <http://rs.tdwg.org/ontology/voc/TaxonName#nameComplete> .
+_:b35 <http://rs.tdwg.org/ontology/voc/TaxonConcept#hasName> _:b36 .
+_:b35 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://rs.tdwg.org/ontology/voc/TaxonConcept#TaxonConcept> .
+_:b36 <http://rs.tdwg.org/ontology/voc/TaxonName#nameComplete> "Aa a" .
+_:b36 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://rs.tdwg.org/ontology/voc/TaxonName#TaxonName> .
+_:b37 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
+_:b37 <http://www.w3.org/2002/07/owl#intersectionOf> _:b54 .
+_:b38 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
+_:b38 <http://www.w3.org/2002/07/owl#onProperty> <http://ontology.phyloref.org/phyloref.owl#includes_TU> .
+_:b38 <http://www.w3.org/2002/07/owl#someValuesFrom> _:b39 .
+_:b39 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
+_:b39 <http://www.w3.org/2002/07/owl#onProperty> <http://rs.tdwg.org/ontology/voc/TaxonConcept#hasName> .
+_:b39 <http://www.w3.org/2002/07/owl#someValuesFrom> _:b40 .
+_:b4 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
+_:b4 <http://www.w3.org/2002/07/owl#hasValue> "Ee e" .
+_:b4 <http://www.w3.org/2002/07/owl#onProperty> <http://rs.tdwg.org/ontology/voc/TaxonName#nameComplete> .
+_:b40 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
+_:b40 <http://www.w3.org/2002/07/owl#hasValue> "Aa a" .
+_:b40 <http://www.w3.org/2002/07/owl#onProperty> <http://rs.tdwg.org/ontology/voc/TaxonName#nameComplete> .
+_:b41 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
+_:b41 <http://www.w3.org/2002/07/owl#onProperty> <http://ontology.phyloref.org/phyloref.owl#excludes_lineage_to> .
+_:b41 <http://www.w3.org/2002/07/owl#someValuesFrom> <http://example.org/phyx.js/example#phyloref2> .
+_:b42 <http://rs.tdwg.org/ontology/voc/TaxonConcept#hasName> _:b43 .
+_:b42 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://rs.tdwg.org/ontology/voc/TaxonConcept#TaxonConcept> .
+_:b43 <http://rs.tdwg.org/ontology/voc/TaxonName#nameComplete> "Cc c" .
+_:b43 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://rs.tdwg.org/ontology/voc/TaxonName#TaxonName> .
+_:b44 <http://rs.tdwg.org/ontology/voc/TaxonConcept#hasName> _:b45 .
+_:b44 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://rs.tdwg.org/ontology/voc/TaxonConcept#TaxonConcept> .
+_:b45 <http://rs.tdwg.org/ontology/voc/TaxonName#nameComplete> "Dd d" .
+_:b45 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://rs.tdwg.org/ontology/voc/TaxonName#TaxonName> .
+_:b46 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
+_:b46 <http://www.w3.org/2002/07/owl#onProperty> <http://purl.obolibrary.org/obo/CDAO_0000149> .
+_:b46 <http://www.w3.org/2002/07/owl#someValuesFrom> _:b47 .
+_:b47 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
+_:b47 <http://www.w3.org/2002/07/owl#intersectionOf> _:b56 .
+_:b48 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
+_:b48 <http://www.w3.org/2002/07/owl#onProperty> <http://ontology.phyloref.org/phyloref.owl#excludes_TU> .
+_:b48 <http://www.w3.org/2002/07/owl#someValuesFrom> _:b49 .
+_:b49 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
+_:b49 <http://www.w3.org/2002/07/owl#onProperty> <http://rs.tdwg.org/ontology/voc/TaxonConcept#hasName> .
+_:b49 <http://www.w3.org/2002/07/owl#someValuesFrom> _:b50 .
+_:b5 <http://rs.tdwg.org/ontology/voc/TaxonConcept#hasName> _:b6 .
+_:b5 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://rs.tdwg.org/ontology/voc/TaxonConcept#TaxonConcept> .
+_:b5 <http://www.w3.org/2000/01/rdf-schema#label> "Specifier_phyloref" .
+_:b50 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
+_:b50 <http://www.w3.org/2002/07/owl#hasValue> "Cc c" .
+_:b50 <http://www.w3.org/2002/07/owl#onProperty> <http://rs.tdwg.org/ontology/voc/TaxonName#nameComplete> .
+_:b51 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
+_:b51 <http://www.w3.org/2002/07/owl#onProperty> <http://ontology.phyloref.org/phyloref.owl#includes_TU> .
+_:b51 <http://www.w3.org/2002/07/owl#someValuesFrom> _:b52 .
+_:b52 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
+_:b52 <http://www.w3.org/2002/07/owl#onProperty> <http://rs.tdwg.org/ontology/voc/TaxonConcept#hasName> .
+_:b52 <http://www.w3.org/2002/07/owl#someValuesFrom> _:b53 .
+_:b53 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
+_:b53 <http://www.w3.org/2002/07/owl#hasValue> "Dd d" .
+_:b53 <http://www.w3.org/2002/07/owl#onProperty> <http://rs.tdwg.org/ontology/voc/TaxonName#nameComplete> .
+_:b54 <http://www.w3.org/1999/02/22-rdf-syntax-ns#first> _:b38 .
+_:b54 <http://www.w3.org/1999/02/22-rdf-syntax-ns#rest> _:b55 .
+_:b55 <http://www.w3.org/1999/02/22-rdf-syntax-ns#first> _:b41 .
+_:b55 <http://www.w3.org/1999/02/22-rdf-syntax-ns#rest> <http://www.w3.org/1999/02/22-rdf-syntax-ns#nil> .
+_:b56 <http://www.w3.org/1999/02/22-rdf-syntax-ns#first> _:b48 .
+_:b56 <http://www.w3.org/1999/02/22-rdf-syntax-ns#rest> _:b57 .
+_:b57 <http://www.w3.org/1999/02/22-rdf-syntax-ns#first> _:b51 .
+_:b57 <http://www.w3.org/1999/02/22-rdf-syntax-ns#rest> <http://www.w3.org/1999/02/22-rdf-syntax-ns#nil> .
+_:b6 <http://rs.tdwg.org/ontology/voc/TaxonName#genusPart> "Specifier" .
+_:b6 <http://rs.tdwg.org/ontology/voc/TaxonName#nameComplete> "Specifier phyloref" .
+_:b6 <http://rs.tdwg.org/ontology/voc/TaxonName#nomenclaturalCode> <http://purl.obolibrary.org/obo/NOMEN_0000036> .
+_:b6 <http://rs.tdwg.org/ontology/voc/TaxonName#specificEpithet> "phyloref" .
+_:b6 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://rs.tdwg.org/ontology/voc/TaxonName#TaxonName> .
+_:b6 <http://www.w3.org/2000/01/rdf-schema#label> "Specifier_phyloref" .
+_:b7 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
+_:b7 <http://www.w3.org/2002/07/owl#onProperty> <http://purl.obolibrary.org/obo/CDAO_0000187> .
+_:b7 <http://www.w3.org/2002/07/owl#someValuesFrom> _:b8 .
+_:b8 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
+_:b8 <http://www.w3.org/2002/07/owl#onProperty> <http://rs.tdwg.org/ontology/voc/TaxonConcept#hasName> .
+_:b8 <http://www.w3.org/2002/07/owl#someValuesFrom> _:b9 .
+_:b9 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Restriction> .
+_:b9 <http://www.w3.org/2002/07/owl#hasValue> "Specifier phyloref" .
+_:b9 <http://www.w3.org/2002/07/owl#onProperty> <http://rs.tdwg.org/ontology/voc/TaxonName#nameComplete> .
diff --git a/test/examples/correct/testudinata_phylonym.json b/test/examples/correct/testudinata_phylonym.json
new file mode 100644
index 00000000..45552175
--- /dev/null
+++ b/test/examples/correct/testudinata_phylonym.json
@@ -0,0 +1,124 @@
+{
+    "@context": "../../../docs/context/development/phyx.json",
+    "phylorefs": [
+        {
+            "label": "Testudinata",
+            "phylorefType": "phyloref:PhyloreferenceUsingApomorphy",
+            "definition": "The apomorphy-based clade name, for which a complete turtle shell, as inherited by Testudo graeca Linnaeus 1758 is an apomorphy. A 'complete turtle shell' is herein defined as a composite structure consisting of a carapace with interlocking costals, neurals, peripherals, and a nuchal, together with the plastron comprising interlocking epi-, hyo-, meso- (lost in Testudo graeca), hypo-, xiphiplastra and an entoplastron.",
+            "definitionSource": {
+              "type": "book_section",
+              "title": "Testudinata (#273)",
+              "authors": [
+                {
+                  "firstname": "W.",
+                  "middlename": "G.",
+                  "lastname": "Joyce"
+                },
+                {
+                  "firstname": "J.",
+                  "middlename": "F.",
+                  "lastname": "Parham"
+                },
+                {
+                  "firstname": "J.",
+                  "lastname": "Anquetin"
+                },
+                {
+                  "firstname": "J.",
+                  "lastname": "Claude"
+                },
+                {
+                  "firstname": "I.",
+                  "middlename": "G.",
+                  "lastname": "Danilov"
+                },
+                {
+                  "firstname": "J.",
+                  "middlename": "B.",
+                  "lastname": "Iverson"
+                },
+                {
+                  "firstname": "B.",
+                  "lastname": "Kear"
+                },
+                {
+                  "firstname": "T.",
+                  "middlename": "R.",
+                  "lastname": "Lyson"
+                },
+                {
+                  "firstname": "M.",
+                  "lastname": "Rabi"
+                },
+                {
+                  "firstname": "J.",
+                  "lastname": "Sterli"
+                }
+              ],
+              "year": 2020,
+              "identifier": [
+                {
+                    "type": "regnum",
+                    "id": "273"
+                }
+              ],
+              "editors": [
+                {
+                  "firstname": "K.",
+                  "lastname": "de Queiroz"
+                },
+                {
+                  "firstname": "P.",
+                  "middlename": "D.",
+                  "lastname": "Cantino"
+                },
+                {
+                  "firstname": "J.",
+                  "middlename": "A.",
+                  "lastname": "Gauthier"
+                }
+              ],
+              "publisher": "CRC Press",
+              "city": "Boca Raton, FL",
+              "journal": {
+                "name": "Phylonyms: a companion to the PhyloCode",
+                "pages": "1045--1048",
+                "identifier": [{
+                  "type": "ISBN",
+                  "id": "9781138332935"
+                }]
+              }
+            },
+            "apomorphy": {
+              "@type": "https://semanticscience.org/resource/SIO_010056",
+              "exactMatch": "http://purl.obolibrary.org/obo/UBERON_0008271",
+              "definition": "A 'complete turtle shell' is herein defined as a composite structure consisting of a carapace with interlocking costals, neurals, peripherals, and a nuchal, together with the plastron comprising interlocking epi-, hyo-, meso- (lost in Testudo graeca), hypo-, xiphiplastra and an entoplastron. These are articulated with one another along a bridge. Additional elements may be present as well."
+            },
+            "internalSpecifiers": [
+                {
+                    "@type": "http://rs.tdwg.org/ontology/voc/TaxonConcept#TaxonConcept",
+                    "hasName": {
+                        "@type": "http://rs.tdwg.org/ontology/voc/TaxonName#TaxonName",
+                        "nomenclaturalCode": "http://purl.obolibrary.org/obo/NOMEN_0000107",
+                        "label": "Testudo graeca Linnaeus 1758",
+                        "nameComplete": "Testudo graeca",
+                        "genusPart": "Testudo",
+                        "specificEpithet": "graeca"
+                    }
+                }
+            ],
+            "pso:holdsStatusInTime": [
+                {
+                    "@type": "http://purl.org/spar/pso/StatusInTime",
+                    "pso:withStatus": {
+                        "@id": "pso:submitted"
+                    },
+                    "tvc:atTime": {
+                        "timeinterval:hasIntervalStartDate": "2021-02-09T20:36:09Z"
+                    }
+                }
+            ]
+        }
+    ],
+    "defaultNomenclaturalCodeURI": "http://purl.obolibrary.org/obo/NOMEN_0000107"
+}
diff --git a/test/examples/correct/testudinata_phylonym.jsonld b/test/examples/correct/testudinata_phylonym.jsonld
new file mode 100644
index 00000000..20d04ec0
--- /dev/null
+++ b/test/examples/correct/testudinata_phylonym.jsonld
@@ -0,0 +1,142 @@
+{
+  "@context": "../../../docs/context/development/phyx.json",
+  "phylorefs": [
+    {
+      "label": "Testudinata",
+      "phylorefType": "phyloref:PhyloreferenceUsingApomorphy",
+      "definition": "The apomorphy-based clade name, for which a complete turtle shell, as inherited by Testudo graeca Linnaeus 1758 is an apomorphy. A 'complete turtle shell' is herein defined as a composite structure consisting of a carapace with interlocking costals, neurals, peripherals, and a nuchal, together with the plastron comprising interlocking epi-, hyo-, meso- (lost in Testudo graeca), hypo-, xiphiplastra and an entoplastron.",
+      "definitionSource": {
+        "type": "book_section",
+        "title": "Testudinata (#273)",
+        "authors": [
+          {
+            "firstname": "W.",
+            "middlename": "G.",
+            "lastname": "Joyce"
+          },
+          {
+            "firstname": "J.",
+            "middlename": "F.",
+            "lastname": "Parham"
+          },
+          {
+            "firstname": "J.",
+            "lastname": "Anquetin"
+          },
+          {
+            "firstname": "J.",
+            "lastname": "Claude"
+          },
+          {
+            "firstname": "I.",
+            "middlename": "G.",
+            "lastname": "Danilov"
+          },
+          {
+            "firstname": "J.",
+            "middlename": "B.",
+            "lastname": "Iverson"
+          },
+          {
+            "firstname": "B.",
+            "lastname": "Kear"
+          },
+          {
+            "firstname": "T.",
+            "middlename": "R.",
+            "lastname": "Lyson"
+          },
+          {
+            "firstname": "M.",
+            "lastname": "Rabi"
+          },
+          {
+            "firstname": "J.",
+            "lastname": "Sterli"
+          }
+        ],
+        "year": 2020,
+        "identifier": [
+          {
+            "type": "regnum",
+            "id": "273"
+          }
+        ],
+        "editors": [
+          {
+            "firstname": "K.",
+            "lastname": "de Queiroz"
+          },
+          {
+            "firstname": "P.",
+            "middlename": "D.",
+            "lastname": "Cantino"
+          },
+          {
+            "firstname": "J.",
+            "middlename": "A.",
+            "lastname": "Gauthier"
+          }
+        ],
+        "publisher": "CRC Press",
+        "city": "Boca Raton, FL",
+        "journal": {
+          "name": "Phylonyms: a companion to the PhyloCode",
+          "pages": "1045--1048",
+          "identifier": [
+            {
+              "type": "ISBN",
+              "id": "9781138332935"
+            }
+          ]
+        }
+      },
+      "apomorphy": {
+        "@type": "https://semanticscience.org/resource/SIO_010056",
+        "exactMatch": "http://purl.obolibrary.org/obo/UBERON_0008271",
+        "definition": "A 'complete turtle shell' is herein defined as a composite structure consisting of a carapace with interlocking costals, neurals, peripherals, and a nuchal, together with the plastron comprising interlocking epi-, hyo-, meso- (lost in Testudo graeca), hypo-, xiphiplastra and an entoplastron. These are articulated with one another along a bridge. Additional elements may be present as well."
+      },
+      "internalSpecifiers": [
+        {
+          "@type": "http://rs.tdwg.org/ontology/voc/TaxonConcept#TaxonConcept",
+          "hasName": {
+            "@type": "http://rs.tdwg.org/ontology/voc/TaxonName#TaxonName",
+            "nomenclaturalCode": "http://purl.obolibrary.org/obo/NOMEN_0000107",
+            "label": "Testudo graeca Linnaeus 1758",
+            "nameComplete": "Testudo graeca",
+            "genusPart": "Testudo",
+            "specificEpithet": "graeca"
+          }
+        }
+      ],
+      "pso:holdsStatusInTime": [
+        {
+          "@type": "http://purl.org/spar/pso/StatusInTime",
+          "pso:withStatus": {
+            "@id": "pso:submitted"
+          },
+          "tvc:atTime": {
+            "timeinterval:hasIntervalStartDate": "2021-02-09T20:36:09Z"
+          }
+        }
+      ],
+      "@id": "http://example.org/phyx.js/example#phyloref0",
+      "@type": "owl:Class",
+      "subClassOf": [
+        "phyloref:Phyloreference",
+        "phyloref:PhyloreferenceUsingApomorphy"
+      ]
+    }
+  ],
+  "defaultNomenclaturalCodeURI": "http://purl.obolibrary.org/obo/NOMEN_0000107",
+  "@id": "http://example.org/phyx.js/example#",
+  "@type": [
+    "testcase:PhyloreferenceTestCase",
+    "owl:Ontology"
+  ],
+  "owl:imports": [
+    "http://raw.githubusercontent.com/phyloref/curation-workflow/develop/ontologies/phyloref_testcase.owl",
+    "http://ontology.phyloref.org/2018-12-14/phyloref.owl",
+    "http://ontology.phyloref.org/2018-12-14/tcan.owl"
+  ]
+}
\ No newline at end of file
diff --git a/test/examples/correct/testudinata_phylonym.nq b/test/examples/correct/testudinata_phylonym.nq
new file mode 100644
index 00000000..44364ad1
--- /dev/null
+++ b/test/examples/correct/testudinata_phylonym.nq
@@ -0,0 +1,31 @@
+<http://example.org/phyx.js/example#> <http://vocab.phyloref.org/phyloref/testcase.owl#has_phyloreference> <http://example.org/phyx.js/example#phyloref0> .
+<http://example.org/phyx.js/example#> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://vocab.phyloref.org/phyloref/testcase.owl#PhyloreferenceTestCase> .
+<http://example.org/phyx.js/example#> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Ontology> .
+<http://example.org/phyx.js/example#> <http://www.w3.org/2002/07/owl#imports> <http://ontology.phyloref.org/2018-12-14/phyloref.owl> .
+<http://example.org/phyx.js/example#> <http://www.w3.org/2002/07/owl#imports> <http://ontology.phyloref.org/2018-12-14/tcan.owl> .
+<http://example.org/phyx.js/example#> <http://www.w3.org/2002/07/owl#imports> <http://raw.githubusercontent.com/phyloref/curation-workflow/develop/ontologies/phyloref_testcase.owl> .
+<http://example.org/phyx.js/example#phyloref0> <http://purl.obolibrary.org/obo/IAO_0000115> "The apomorphy-based clade name, for which a complete turtle shell, as inherited by Testudo graeca Linnaeus 1758 is an apomorphy. A 'complete turtle shell' is herein defined as a composite structure consisting of a carapace with interlocking costals, neurals, peripherals, and a nuchal, together with the plastron comprising interlocking epi-, hyo-, meso- (lost in Testudo graeca), hypo-, xiphiplastra and an entoplastron." .
+<http://example.org/phyx.js/example#phyloref0> <http://purl.obolibrary.org/obo/IAO_0000119> _:b0 .
+<http://example.org/phyx.js/example#phyloref0> <http://purl.org/spar/pso/holdsStatusInTime> _:b1 .
+<http://example.org/phyx.js/example#phyloref0> <http://vocab.phyloref.org/phyloref/testcase.owl#apomorphy> _:b3 .
+<http://example.org/phyx.js/example#phyloref0> <http://vocab.phyloref.org/phyloref/testcase.owl#internal_specifier> _:b4 .
+<http://example.org/phyx.js/example#phyloref0> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
+<http://example.org/phyx.js/example#phyloref0> <http://www.w3.org/2000/01/rdf-schema#label> "Testudinata" .
+<http://example.org/phyx.js/example#phyloref0> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#Phyloreference> .
+<http://example.org/phyx.js/example#phyloref0> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://ontology.phyloref.org/phyloref.owl#PhyloreferenceUsingApomorphy> .
+_:b0 <http://purl.org/dc/terms/title> "Testudinata (#273)" .
+_:b1 <http://purl.org/spar/pso/withStatus> <http://purl.org/spar/pso/submitted> .
+_:b1 <http://www.essepuntato.it/2012/04/tvc/atTime> _:b2 .
+_:b1 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.org/spar/pso/StatusInTime> .
+_:b2 <http://www.ontologydesignpatterns.org/cp/owl/timeinterval.owl#hasIntervalStartDate> "2021-02-09T20:36:09Z" .
+_:b3 <http://purl.obolibrary.org/obo/IAO_0000115> "A 'complete turtle shell' is herein defined as a composite structure consisting of a carapace with interlocking costals, neurals, peripherals, and a nuchal, together with the plastron comprising interlocking epi-, hyo-, meso- (lost in Testudo graeca), hypo-, xiphiplastra and an entoplastron. These are articulated with one another along a bridge. Additional elements may be present as well." .
+_:b3 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <https://semanticscience.org/resource/SIO_010056> .
+_:b3 <http://www.w3.org/2004/02/skos/core#exactMatch> <http://purl.obolibrary.org/obo/UBERON_0008271> .
+_:b4 <http://rs.tdwg.org/ontology/voc/TaxonConcept#hasName> _:b5 .
+_:b4 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://rs.tdwg.org/ontology/voc/TaxonConcept#TaxonConcept> .
+_:b5 <http://rs.tdwg.org/ontology/voc/TaxonName#genusPart> "Testudo" .
+_:b5 <http://rs.tdwg.org/ontology/voc/TaxonName#nameComplete> "Testudo graeca" .
+_:b5 <http://rs.tdwg.org/ontology/voc/TaxonName#nomenclaturalCode> <http://purl.obolibrary.org/obo/NOMEN_0000107> .
+_:b5 <http://rs.tdwg.org/ontology/voc/TaxonName#specificEpithet> "graeca" .
+_:b5 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://rs.tdwg.org/ontology/voc/TaxonName#TaxonName> .
+_:b5 <http://www.w3.org/2000/01/rdf-schema#label> "Testudo graeca Linnaeus 1758" .
diff --git a/test/jphyloref.js b/test/jphyloref.js
index 1fdaf7e5..8c005d3e 100644
--- a/test/jphyloref.js
+++ b/test/jphyloref.js
@@ -75,16 +75,20 @@ describe('JPhyloRef', function () {
 
           expect(matches, `Test result line not found in STDERR <${child.stderr}>`).to.have.lengthOf(5);
 
-          const countSuccess = Number(matches[1]);
+          // const countSuccess = Number(matches[1]);
           const countFailure = Number(matches[2]);
           const countTODOs = Number(matches[3]);
           // const countSkipped = Number(matches[4]);
 
-          expect(countSuccess, 'Expected one or more successes').to.be.greaterThan(0);
+          // We can't test for one or more successes since some example Phyx file
+          // such as apomorphy-based phyloreferences don't have any successes at all.
+          // expect(countSuccess, 'Expected one or more successes').to.be.greaterThan(0);
           expect(countFailure, 'Expected zero failures').to.equal(0);
           expect(countTODOs, 'Expected zero TODOs').to.equal(0);
 
-          expect(child.status).to.equal(0);
+          // An exit code of 0 means success. An exit code of 255 means that while
+          // there were no successes, there were also no failures. Either is acceptable here.
+          expect(child.status).to.be.oneOf([0, 255]);
         });
       });
   });
diff --git a/test/scripts/phyx2owl.js b/test/scripts/phyx2owl.js
index 0bd0eccd..4f4eb170 100644
--- a/test/scripts/phyx2owl.js
+++ b/test/scripts/phyx2owl.js
@@ -40,14 +40,14 @@ describe(PHYX2OWL_JS, function () {
     const OWL_FILE = path.resolve(__dirname, '../examples/correct/brochu_2003.owl');
     const EXPECTED_OWL_FILE = path.resolve(__dirname, '../examples/correct/brochu_2003.jsonld');
 
-    // If there is already a '../examples/brochu_2003.json' file, we should delete it.
+    // If there is already a '../examples/brochu_2003.owl' file, we should delete it.
     if (fs.existsSync(OWL_FILE)) fs.unlinkSync(OWL_FILE);
     expect(fs.existsSync(OWL_FILE)).to.be.false;
 
     // Convert brochu_2003.json to brochu_2003.owl.
     // Because of the way in which we test brochu_2003.owl in test/examples.js,
     // we need to set a base URI as well.
-    const result = child.spawnSync(PHYX2OWL_JS, [PHYX_FILE, '--base-uri', 'http://example.org/brochu_2003.json#'], {
+    const result = child.spawnSync(PHYX2OWL_JS, [PHYX_FILE, '--base-uri', 'http://example.org/phyx.js/example#'], {
       encoding: 'utf-8',
       stdio: 'pipe',
     });
@@ -71,7 +71,7 @@ describe(PHYX2OWL_JS, function () {
     const jsonFilesInExamples = fs.readdirSync(EXAMPLE_DIR, 'utf8')
       .filter(fileName => fileName.toLowerCase().endsWith('.json'));
 
-    const result = child.spawnSync(PHYX2OWL_JS, [EXAMPLE_DIR], {
+    const result = child.spawnSync(PHYX2OWL_JS, [EXAMPLE_DIR, '--base-uri', 'http://example.org/phyx.js/example#'], {
       encoding: 'utf-8',
       stdio: 'pipe',
     });