Installation issues #1
Description
Hi,
I'd like to install from source and tryout your software that looks really nice.
That being said, while following the installation instruction both for Mac and Linux I get the following error:
ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts.
flask 3.1.0 requires Werkzeug>=3.1, but you have werkzeug 3.0.4 which is incompatible.
monai 1.4.0 requires numpy<2.0,>=1.24, but you have numpy 1.23.0 which is incompatible.
tensorboardx 2.6.2.2 requires protobuf>=3.20, but you have protobuf 3.19.6 which is incompatible.
Here is what I did:
mamba create -n test pyhton=3.9
mamba activate test
pip install -r requirements.txtJust in case I tried to also run:
python OS_Demo.pywhich got me the following error:
Traceback (most recent call last):
File "/home/leoguignard/dvlp/tmp/3DcellScope/OS_Demo.py", line 6, in <module>
hide_console()
File "/home/leoguignard/dvlp/tmp/3DcellScope/OS_Demo.py", line 4, in hide_console
ctypes.windll.user32.ShowWindow(ctypes.windll.kernel32.GetConsoleWindow(), 0)
AttributeError: module 'ctypes' has no attribute 'windll'
Which, while indeed the libraries are not correctly installed, it does not seem to be a problem arising from that but rather an OS problem. Indeed ctypes.windll is a Windows specific module.
Do you think there would be any simple way around that?
Cheers and thanks for the very nice paper.