diff --git a/packages/flashdeconv/meta.yaml b/packages/flashdeconv/meta.yaml new file mode 100644 index 0000000..77cf36a --- /dev/null +++ b/packages/flashdeconv/meta.yaml @@ -0,0 +1,27 @@ +name: flashdeconv +description: | + FlashDeconv is a high-performance spatial transcriptomics deconvolution tool that enables cell type mapping + at atlas scale. Using structure-preserving sketching via randomized numerical linear algebra, FlashDeconv + achieves linear time and memory complexity, processing 1 million spots in approximately 3 minutes on a + standard laptop without GPU. It provides accurate cell type proportion estimation with Pearson r = 0.944 + on the Spotless benchmark, and preserves rare cell type detection through leverage-score weighted sampling. +project_home: https://github.com/cafferychen777/flashdeconv +documentation_home: https://github.com/cafferychen777/flashdeconv#readme +tutorials_home: https://github.com/cafferychen777/flashdeconv/tree/main/examples +publications: + - 10.64898/2025.12.22.696108 +install: + pypi: flashdeconv +tags: + - spatial transcriptomics + - deconvolution + - cell type + - Visium HD + - sketching +license: BSD-3-Clause +version: v0.1 +contact: + - cafferychen777 +test_command: | + pip install ".[test]" && pytest +category: ecosystem