From 8acc70be8843b3f61b66b1db107044ad7724a9ec Mon Sep 17 00:00:00 2001
From: Max Frank <max.frank@czbiohub.org>
Date: Mon, 9 Feb 2026 16:24:59 -0800
Subject: [PATCH 1/3] add grassp to ecosystem packages

---
 packages/grassp/meta.yaml | 25 +++++++++++++++++++++++++
 1 file changed, 25 insertions(+)
 create mode 100644 packages/grassp/meta.yaml

diff --git a/packages/grassp/meta.yaml b/packages/grassp/meta.yaml
new file mode 100644
index 0000000..cf3d845
--- /dev/null
+++ b/packages/grassp/meta.yaml
@@ -0,0 +1,25 @@
+
+name: grassp
+description: |
+  grassp (GRaph-based Analysis of Subcellular/Spatial Proteomics) is a Python module
+  for fast, flexible, and scalable analysis of mass-spectrometry-based subcellular proteomics datasets.
+  It uses the anndata format to store mass-spec data and results.
+  scanpy is used for dimensionality reduction and visualization functions.
+project_home: https://github.com/czbiohub-sf/grassp
+documentation_home: https://public.czbiohub.org/comp.bio/grassp/
+tutorials_home: https://public.czbiohub.org/comp.bio/grassp/tutorials/
+publications:
+install:
+  pypi: grassp
+tags:
+  - subcellular proteomics
+  - mass-spectrometry
+  - graph-based analysis
+license: BSD 3-Clause
+version: v0.1.0
+contact:
+  - mffrank
+  - duopeng
+  - kyleawayan
+test_command: pip install ".[dev]" && pytest
+category: ecosystem

From d57bd194e7aeef5e4e1a02eabf736ac21432438b Mon Sep 17 00:00:00 2001
From: "pre-commit-ci[bot]"
 <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Date: Tue, 10 Feb 2026 00:32:21 +0000
Subject: [PATCH 2/3] [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci
---
 packages/grassp/meta.yaml | 1 -
 1 file changed, 1 deletion(-)

diff --git a/packages/grassp/meta.yaml b/packages/grassp/meta.yaml
index cf3d845..b310290 100644
--- a/packages/grassp/meta.yaml
+++ b/packages/grassp/meta.yaml
@@ -1,4 +1,3 @@
-
 name: grassp
 description: |
   grassp (GRaph-based Analysis of Subcellular/Spatial Proteomics) is a Python module

From bb492169bd3e9d356d084fa13b231b055c60ff3e Mon Sep 17 00:00:00 2001
From: Max Frank <max.frank@czbiohub.org>
Date: Mon, 9 Feb 2026 16:34:23 -0800
Subject: [PATCH 3/3] fix json

---
 packages/grassp/meta.yaml | 3 +--
 1 file changed, 1 insertion(+), 2 deletions(-)

diff --git a/packages/grassp/meta.yaml b/packages/grassp/meta.yaml
index b310290..4a20da5 100644
--- a/packages/grassp/meta.yaml
+++ b/packages/grassp/meta.yaml
@@ -7,14 +7,13 @@ description: |
 project_home: https://github.com/czbiohub-sf/grassp
 documentation_home: https://public.czbiohub.org/comp.bio/grassp/
 tutorials_home: https://public.czbiohub.org/comp.bio/grassp/tutorials/
-publications:
 install:
   pypi: grassp
 tags:
   - subcellular proteomics
   - mass-spectrometry
   - graph-based analysis
-license: BSD 3-Clause
+license: BSD-3-Clause
 version: v0.1.0
 contact:
   - mffrank