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Description
hello
i used stereo seq to analysis sp, want to ask how to create score for focus cell type ,i look for u example nk_cells is
AAACAGTGTTCCTGGG-1_-0 0.061412
AAACCGGGTAGGTACC-1_-0 0.308839
AAACCGTTCGTCCAGG-1_-0 0.349758
AAACCTAAGCAGCCGG-1_-0 2.586584
AAACGAAGAACATACC-1_-0 0.472401
but in my data
obs: 'nCount_Spatial', 'nFeature_Spatial', 'percent.mito', 'orig.ident', 'x', 'y', 'ClusterNames'
122 | 100 | 5.737705 | sample | 9600 | 11400 | Unknown | ST_C_1 | 100 | 4.615121 | ... | 51.344868 | 99.999993 | 99.999993 | 99.999993 | 0.0 | 454.057556 | 454.057556 | 454.057556 | 454.057556 | 454.057556
483 | 357 | 3.726708 | sample | 9600 | 11500 | Fibroblast | ST_C_1 | 357 | 5.880533 | ... | 17.458218 | 32.293583 | 58.638488 | 99.999995 | 0.0 | 1168.154907 | 1168.154907 | 1168.154907 | 1168.154907 | 1168.154907
220 | 182 | 2.272727 | sample | 9600 | 11600 | Immune cell | ST_C_1 | 182 | 5.209486 | ... | 29.784961 | 56.381568 | 100.000004 | 100.000004 | 0.0 | 721.609741 | 721.609741 | 721.609741 | 721.609741 | 721.609741
168 | 134 | 5.952381 | sample | 9600 | 11700 | Fibroblast | ST_C_1 | 134
hope u help
hong