your latest preprint...

[lefterov]

It is not an issue...
it is a request: can you provide a link to the latest BioRxiv preprint where you describe the latest PsiCLASS version..., or a link to the code...?

Thanks, and have a great weekend.

[mourisl]

I'm not sure I get your question. Is there a new PsiCLASS version?

[lefterov]

Hi Li, I guess there is no… The email I sent to you was my fault – one of my postdocs messed up BAKER3 and a “new version” of PsiCLASS… By the way, we see the differences between Finder and PsiCLASS (as much as it written in different publications) and we are wondering if we move to PciCLASS, we would have received your support…? Thanks again for your prompt response and I wish you a very nice weekend.

…

-I.

-- [A close-up of a logo Description automatically generated] Iliya Lefterov, MD, PhD Professor, University of Pittsburgh Pittsburgh, Pennsylvania, USA ***@***.*** ***@***.*** 412 383 6906 - office 412 624 8662 - lab From: Li Song ***@***.***> Date: Friday, September 29, 2023 at 9:56 PM To: splicebox/PsiCLASS ***@***.***> Cc: Lefterov, Iliya ***@***.***>, Author ***@***.***> Subject: Re: [splicebox/PsiCLASS] your latest preprint... (Issue #32) I'm not sure I get your question. Is there a new PsiCLASS version? — Reply to this email directly, view it on GitHub<#32 (comment)>, or unsubscribe<https://github.com/notifications/unsubscribe-auth/AANSETUHOOWLE5AD2OISR23X4534NANCNFSM6AAAAAA5NFXB4U>. You are receiving this because you authored the thread.Message ID: ***@***.***>

[mourisl]

I think Finder is a more comprehensive gene annotation workflow and PsiCLASS is one module in it, therefore probably PsiCLASS could not replace Finder in total. Nevertheless, if you find any issues in PsiCLASS, we will try our best to fix them.