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Found your tool via your arxiv article. I tested it with my data and had interesting results with fast-STAR, we are likely ordering soon some monoclonals to validate antigen specificity.
I have one question regarding the clone definition, If I understood correctly one of the conditions is that CDR3 sequences need to be exactly the same; is it possible to implement it so that one can modulate this to a given percentage similarity or distance? We find that helps us a lot when doing repertoire analysis.
Best,
Carlos
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