problem while running inversion

[maxgav13]

When I run the inversion in Refrainv.py I get the following issue

in runInversion
plotContourModel()
File "/Users/max/Downloads/software/Python/Refrapy/./Refrainv.py", line 1093, in plotContourModel
for c in cm.collections: c.set_clip_path(patch)
AttributeError: 'QuadContourSet' object has no attribute 'collections'

I get the same error in all the forks I tried as well

I would appreciate help with this

[GGDRriedel]

This souds like you are using a library version that has changed some methods or attributes. Can you post your environment?

[maxgav13]

Sure, here it is

name: pg
channels:

• conda-forge
• gimli
• defaults
  dependencies:
• aiohappyeyeballs=2.6.1=pyhd8ed1ab_0
• aiohttp=3.12.12=py312h998013c_0
• aiosignal=1.3.2=pyhd8ed1ab_0
• anyio=4.7.0=py312hca03da5_0
• appnope=0.1.3=py312hca03da5_1001
• argon2-cffi=21.3.0=pyhd3eb1b0_0
• argon2-cffi-bindings=21.2.0=py312h80987f9_1
• asttokens=3.0.0=py312hca03da5_0
• async-lru=2.0.4=py312hca03da5_0
• attrs=25.3.0=pyh71513ae_0
• babel=2.16.0=py312hca03da5_0
• beautifulsoup4=4.12.3=py312hca03da5_0
• bleach=6.2.0=py312hca03da5_0
• blosc=1.21.6=h7dd00d9_1
• boost=1.85.0=ha814d7c_4
• brotli=1.1.0=h5505292_3
• brotli-bin=1.1.0=h5505292_3
• brotli-python=1.1.0=py312hd8f9ff3_3
• bzip2=1.0.8=h99b78c6_7
• c-ares=1.34.5=h5505292_0
• ca-certificates=2025.4.26=hbd8a1cb_0
• cairo=1.18.4=h6a3b0d2_0
• certifi=2025.4.26=pyhd8ed1ab_0
• cffi=1.17.1=py312h0fad829_0
• charset-normalizer=3.4.2=pyhd8ed1ab_0
• colorama=0.4.6=pyhd8ed1ab_1
• comm=0.2.1=py312hca03da5_0
• contourpy=1.3.2=py312hb23fbb9_0
• cycler=0.12.1=pyhd8ed1ab_1
• cyrus-sasl=2.1.27=h60b93bd_7
• debugpy=1.8.11=py312h313beb8_0
• decorator=5.1.1=pyhd3eb1b0_0
• defusedxml=0.7.1=pyhd3eb1b0_0
• double-conversion=3.3.1=h286801f_0
• exceptiongroup=1.3.0=pyhd8ed1ab_0
• executing=0.8.3=pyhd3eb1b0_0
• font-ttf-dejavu-sans-mono=2.37=hab24e00_0
• font-ttf-inconsolata=3.000=h77eed37_0
• font-ttf-source-code-pro=2.038=h77eed37_0
• font-ttf-ubuntu=0.83=h77eed37_3
• fontconfig=2.15.0=h1383a14_1
• fonts-conda-ecosystem=1=0
• fonts-conda-forge=1=0
• fonttools=4.58.4=py312h998013c_0
• freetype=2.13.3=hce30654_1
• frozenlist=1.6.0=py312hc535dfd_0
• gl2ps=1.4.2=hc97c1ff_1
• glew=2.1.0=h9f76cd9_2
• glib=2.84.2=h85e5b2e_0
• glib-tools=2.84.2=h1dc7a0c_0
• gmp=6.3.0=h7bae524_2
• graphite2=1.3.13=hebf3989_1003
• greenlet=3.1.1=py312h313beb8_0
• gst-plugins-base=1.24.11=h3c5c1d0_0
• gstreamer=1.24.11=hfe24232_0
• h11=0.16.0=py312hca03da5_0
• h2=4.2.0=pyhd8ed1ab_0
• harfbuzz=11.2.1=hab40de2_0
• hdf4=4.2.15=h2ee6834_7
• hdf5=1.14.3=nompi_ha698983_109
• hpack=4.1.0=pyhd8ed1ab_0
• httpcore=1.0.9=py312hca03da5_0
• httpx=0.28.1=py312hca03da5_0
• hyperframe=6.1.0=pyhd8ed1ab_0
• icu=75.1=hfee45f7_0
• idna=3.10=pyhd8ed1ab_1
• iniconfig=2.0.0=pyhd8ed1ab_1
• ipykernel=6.29.5=py312hca03da5_1
• ipython=9.1.0=py312hca03da5_0
• ipython_pygments_lexers=1.1.1=py312hca03da5_0
• ipywidgets=8.1.5=py312hca03da5_0
• jedi=0.19.2=py312hca03da5_0
• jinja2=3.1.6=py312hca03da5_0
• json5=0.9.25=py312hca03da5_0
• jsoncpp=1.9.6=h726d253_1
• jsonschema=4.23.0=py312hca03da5_0
• jsonschema-specifications=2023.7.1=py312hca03da5_0
• jupyter=1.1.1=py312hca03da5_0
• jupyter-lsp=2.2.5=py312hca03da5_0
• jupyter_client=8.6.3=py312hca03da5_0
• jupyter_console=6.6.3=py312hca03da5_1
• jupyter_core=5.7.2=py312hca03da5_0
• jupyter_events=0.12.0=py312hca03da5_0
• jupyter_server=2.15.0=py312hca03da5_0
• jupyter_server_terminals=0.5.3=py312hca03da5_0
• jupyterlab=4.3.4=py312hca03da5_0
• jupyterlab_pygments=0.3.0=py312hca03da5_0
• jupyterlab_server=2.27.3=py312hca03da5_0
• jupyterlab_widgets=3.0.13=py312hca03da5_0
• kiwisolver=1.4.8=py312h2c4a281_0
• krb5=1.21.3=h237132a_0
• lcms2=2.17=h7eeda09_0
• lerc=4.0.0=hd64df32_1
• libaec=1.1.3=hebf3989_0
• libamd=3.3.3=h5087772_7100102
• libblas=3.9.0=31_h10e41b3_openblas
• libboost=1.85.0=hf763ba5_4
• libboost-devel=1.85.0=hf450f58_4
• libboost-headers=1.85.0=hce30654_4
• libboost-python=1.85.0=py312hffe1f2a_4
• libboost-python-devel=1.85.0=py312ha814d7c_4
• libbrotlicommon=1.1.0=h5505292_3
• libbrotlidec=1.1.0=h5505292_3
• libbrotlienc=1.1.0=h5505292_3
• libbtf=2.3.2=h99b4a89_7100102
• libcamd=3.3.3=h99b4a89_7100102
• libcblas=3.9.0=31_hb3479ef_openblas
• libccolamd=3.3.4=h99b4a89_7100102
• libcholmod=5.3.1=hbba04d7_7100102
• libclang-cpp17=17.0.6=default_hf90f093_8
• libclang-cpp18.1=18.1.8=default_hf90f093_10
• libclang13=20.1.6=default_hee4fbb3_0
• libcolamd=3.3.4=h99b4a89_7100102
• libcurl=8.14.1=h73640d1_0
• libcxsparse=4.4.1=h9e79f82_7100102
• libcxx=20.1.7=ha82da77_0
• libdeflate=1.24=h5773f1b_0
• libedit=3.1.20250104=pl5321hafb1f1b_0
• libev=4.33=h93a5062_2
• libexpat=2.7.0=h286801f_0
• libffi=3.4.6=h1da3d7d_1
• libfreetype=2.13.3=hce30654_1
• libfreetype6=2.13.3=h1d14073_1
• libgfortran=14.2.0=heb5dd2a_105
• libgfortran5=14.2.0=h2c44a93_105
• libglib=2.84.2=hbec27ea_0
• libhwloc=2.11.2=default_hbce5d74_1001
• libiconv=1.18=hfe07756_1
• libintl=0.24.1=h493aca8_0
• libintl-devel=0.24.1=h493aca8_0
• libjpeg-turbo=3.1.0=h5505292_0
• libklu=2.3.5=h4370aa4_7100102
• liblapack=3.9.0=31_hc9a63f6_openblas
• libldl=3.3.2=h99b4a89_7100102
• libllvm17=17.0.6=hc4b4ae8_3
• libllvm18=18.1.8=hc4b4ae8_3
• libllvm20=20.1.7=h598bca7_0
• liblzma=5.8.1=h39f12f2_2
• liblzma-devel=5.8.1=h39f12f2_2
• libnetcdf=4.9.2=nompi_h610d594_116
• libnghttp2=1.64.0=h6d7220d_0
• libntlm=1.8=h5505292_0
• libogg=1.3.5=h48c0fde_1
• libopenblas=0.3.29=openmp_hf332438_0
• libopus=1.5.2=h48c0fde_0
• libparu=1.0.0=h317a14d_7100102
• libpng=1.6.47=h3783ad8_0
• libpq=17.5=h6896619_0
• librbio=4.3.4=h99b4a89_7100102
• libsodium=1.0.18=h1a28f6b_0
• libspex=3.2.3=h15d103f_7100102
• libspqr=4.3.4=h775d698_7100102
• libsqlite=3.50.1=h3f77e49_0
• libssh2=1.11.1=h1590b86_0
• libsuitesparseconfig=7.10.1=h4a8fc20_7100102
• libtheora=1.1.1=h99b78c6_1006
• libtiff=4.7.0=h2f21f7c_5
• libumfpack=6.3.5=h7c2c975_7100102
• libvorbis=1.3.7=h9f76cd9_0
• libwebp-base=1.5.0=h2471fea_0
• libxcb=1.17.0=hdb1d25a_0
• libxml2=2.13.8=h52572c6_0
• libxslt=1.1.41=hf4d3faa_0
• libzip=1.11.2=h1336266_0
• libzlib=1.3.1=h8359307_2
• llvm-openmp=20.1.6=hdb05f8b_0
• loguru=0.7.3=pyh707e725_0
• lxml=5.3.0=py312h1d4350b_1
• lz4-c=1.10.0=h286801f_1
• markupsafe=3.0.2=py312h80987f9_0
• matplotlib=3.10.3=py312h1f38498_0
• matplotlib-base=3.10.3=py312hdbc7e53_0
• matplotlib-inline=0.1.6=py312hca03da5_0
• metis=5.1.0=h15f6cfe_1007
• mistune=3.1.2=py312hca03da5_0
• mpfr=4.2.1=hb693164_3
• msgpack-python=1.1.1=py312hb23fbb9_0
• multidict=6.4.4=py312hdb8e49c_0
• munkres=1.1.4=pyh9f0ad1d_0
• mysql-common=9.3.0=hd7719f6_0
• mysql-libs=9.3.0=ha8be5b7_0
• nbclient=0.10.2=py312hca03da5_0
• nbconvert=7.16.6=py312hca03da5_0
• nbconvert-core=7.16.6=py312hca03da5_0
• nbconvert-pandoc=7.16.6=py312hca03da5_0
• nbformat=5.10.4=py312hca03da5_0
• ncurses=6.5=h5e97a16_3
• nest-asyncio=1.6.0=py312hca03da5_0
• nlohmann_json=3.12.0=ha1acc90_0
• notebook=7.3.2=py312hca03da5_1
• notebook-shim=0.2.4=py312hca03da5_0
• nspr=4.36=h5833ebf_0
• nss=3.112=ha3c76ea_0
• numpy=2.2.6=py312h7c1f314_0
• obspy=1.4.2=py312he0011b7_2
• openblas=0.3.29=openmp_hea878ba_0
• openjpeg=2.5.3=h8a3d83b_0
• openldap=2.6.10=hbe55e7a_0
• openssl=3.5.0=h81ee809_1
• overrides=7.4.0=py312hca03da5_0
• packaging=25.0=pyh29332c3_1
• pandoc=2.12=hca03da5_3
• pandocfilters=1.5.0=pyhd3eb1b0_0
• parso=0.8.4=py312hca03da5_0
• pcre2=10.45=ha881caa_0
• pexpect=4.9.0=py312hca03da5_0
• pgcore=1.5.4=np22py312h3a9382f_0
• pillow=11.2.1=py312h50aef2c_0
• pip=25.1.1=pyh8b19718_0
• pixman=0.46.2=h2f9eb0b_0
• platformdirs=4.3.8=pyhe01879c_0
• pluggy=1.6.0=pyhd8ed1ab_0
• ply=3.11=pyhd8ed1ab_3
• pooch=1.8.2=pyhd8ed1ab_1
• proj=9.5.1=h1318a7e_0
• prometheus_client=0.21.1=py312hca03da5_0
• prompt-toolkit=3.0.43=py312hca03da5_0
• prompt_toolkit=3.0.43=hd3eb1b0_0
• propcache=0.3.1=py312h998013c_0
• psutil=5.9.0=py312h80987f9_1
• pthread-stubs=0.4=hd74edd7_1002
• ptyprocess=0.7.0=pyhd3eb1b0_2
• pugixml=1.15=hd3d436d_0
• pure_eval=0.2.2=pyhd3eb1b0_0
• pycparser=2.22=pyh29332c3_1
• pygimli=1.5.4=py_0
• pygments=2.19.1=pyhd8ed1ab_0
• pyparsing=3.2.3=pyhd8ed1ab_1
• pyqt=5.15.11=py312he8164c3_1
• pyqt5-sip=12.17.0=py312hd8f9ff3_1
• pysocks=1.7.1=pyha55dd90_7
• pytest=8.4.0=pyhd8ed1ab_0
• python=3.12.11=hc22306f_0_cpython
• python-dateutil=2.9.0.post0=pyhff2d567_1
• python-fastjsonschema=2.20.0=py312hca03da5_0
• python-json-logger=3.2.1=py312hca03da5_0
• python_abi=3.12=7_cp312
• pyvista=0.45.2=pyhd8ed1ab_0
• pyyaml=6.0.2=py312h80987f9_0
• pyzmq=26.2.0=py312h313beb8_0
• qhull=2020.2=h420ef59_5
• qt-main=5.15.15=h67564f6_4
• qt6-main=6.8.3=hc9525f7_3
• qtconsole=5.6.1=py312hca03da5_1
• qtpy=2.4.1=py312hca03da5_0
• readline=8.2=h1d1bf99_2
• referencing=0.30.2=py312hca03da5_0
• requests=2.32.4=pyhd8ed1ab_0
• rfc3339-validator=0.1.4=py312hca03da5_0
• rfc3986-validator=0.1.1=py312hca03da5_0
• rpds-py=0.22.3=py312h2aea54e_0
• scipy=1.15.2=py312h99a188d_0
• scooby=0.10.1=pyhd8ed1ab_0
• send2trash=1.8.2=py312hca03da5_1
• setuptools=80.9.0=pyhff2d567_0
• sip=6.12.0=py312hd8f9ff3_0
• six=1.17.0=pyhd8ed1ab_0
• snappy=1.2.1=h98b9ce2_1
• sniffio=1.3.0=py312hca03da5_0
• soupsieve=2.5=py312hca03da5_0
• sqlalchemy=1.4.51=py312h80987f9_1
• sqlite=3.50.1=hd7222ec_0
• stack_data=0.2.0=pyhd3eb1b0_0
• suitesparse=7.10.1=h3071b36_7100102
• tbb=2022.1.0=h9541205_0
• terminado=0.17.1=py312hca03da5_0
• tinycss2=1.4.0=py312hca03da5_0
• tk=8.6.13=h892fb3f_2
• toml=0.10.2=pyhd8ed1ab_1
• tomli=2.2.1=pyhd8ed1ab_1
• tornado=6.5.1=py312hea69d52_0
• tqdm=4.67.1=pyhd8ed1ab_1
• traitlets=5.14.3=py312hca03da5_0
• typing-extensions=4.14.0=h32cad80_0
• typing_extensions=4.14.0=pyhe01879c_0
• unicodedata2=16.0.0=py312hea69d52_0
• urllib3=2.4.0=pyhd8ed1ab_0
• utfcpp=4.0.6=h54c0426_0
• vtk-base=9.3.1=qt_py312h9df0f74_216
• wcwidth=0.2.5=pyhd3eb1b0_0
• webencodings=0.5.1=py312hca03da5_2
• websocket-client=1.8.0=py312hca03da5_0
• wheel=0.45.1=pyhd8ed1ab_1
• widgetsnbextension=4.0.13=py312hca03da5_0
• wslink=2.3.4=pyhd8ed1ab_0
• xorg-libxau=1.0.12=h5505292_0
• xorg-libxdmcp=1.1.5=hd74edd7_0
• xz=5.8.1=h9a6d368_2
• xz-gpl-tools=5.8.1=h9a6d368_2
• xz-tools=5.8.1=h39f12f2_2
• yaml=0.2.5=h1a28f6b_0
• yarl=1.20.1=py312h998013c_0
• zeromq=4.3.5=h313beb8_0
• zlib=1.3.1=h8359307_2
• zstandard=0.23.0=py312hea69d52_2
• zstd=1.5.7=h6491c7d_2
• pip:
  • colorcet==3.1.0
  • joblib==1.5.1
  • pandas==2.3.0
  • patsy==1.0.1
  • pmw==2.1.1
  • pyrefra==25.7.1
  • pytz==2025.2
  • scikit-learn==1.7.0
  • segyio==1.9.13
  • statsmodels==0.14.4
  • threadpoolctl==3.6.0
  • tzdata==2025.2
    prefix: /opt/miniconda3/envs/pg