[BUG] SED-ML files do not simulate all SBML files

[jonrkarr]

Example: https://github.com/virtualcell/vcdb/blob/main/published/biomodel/omex/sbml/biomodel_12119723.omex

The archive has 6 SBML files, but the SED-ML only simulates 3. The native version, only has one VCML model. Taken together, this seems likely to be a bug.

This may be intentional. I'm raising this in case this isn't intentional.

[moraru]

This is intentional - for now, On export we do create all SBML translations of the model(s) encoded in VCML but we do not currently create simulations/tasks for simulations that currently do not have saved simulation results in the VCDB database.

This can result in OMEX files with "unused" models. In the future, we may either remove these models or add simulations based on manual inspection of their use in publication.