create h5 files as input #9
Description
Hi, I was wondering if I would want to build a h5 file as the training input for the BABEL model from a count matrix + a metadata Dataframe, are there any scripts under this repo for that? or I need to make a scanpy subject. Also, I'm a bit confused about python bin/train.py --data FILE1.h5 FILE2.h5 --outdir mymodel 1) should the command be "train_model.py"? 2) what information do FILE1 and FILE2 include? since you mentioned both should include RNA and ATAC, are they just two replicates of multiomics data? Thanks