From 2d52d2cd4ecc9074cc9a4d66e59df398e90b78af Mon Sep 17 00:00:00 2001 From: MASHUOA Date: Thu, 26 Jun 2025 10:51:19 +1200 Subject: [PATCH 1/2] fix export issue --- NAMESPACE | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/NAMESPACE b/NAMESPACE index e4ab4e46..d9cad779 100644 --- a/NAMESPACE +++ b/NAMESPACE @@ -245,7 +245,7 @@ export(PerformROIExtraction) export(PerformSignalDriftCorrection) export(PerformVoteCounting) export(Plot.Permutation) -export(Plot.sampletrend) +export(Plot.sample.trend) export(PlotANOVA) export(PlotANOVA2) export(PlotASCA.Permutation) @@ -458,7 +458,7 @@ export(plotMSfeature) export(plotMirror) export(plotProfile) export(plotSingleTIC) -export(plot_dist) +export(plot.sample.dist) export(processMSMSupload) export(savePeakListMetaData) export(setInclusionDataSets) From 196765b0508afeac5892f7dc91b08e8c54aa20a7 Mon Sep 17 00:00:00 2001 From: MASHUOA Date: Thu, 26 Jun 2025 11:00:41 +1200 Subject: [PATCH 2/2] fix export issue --- NAMESPACE | 2 +- R/batch_effect_utils.R | 4 ++-- 2 files changed, 3 insertions(+), 3 deletions(-) diff --git a/NAMESPACE b/NAMESPACE index d9cad779..9344d6e4 100644 --- a/NAMESPACE +++ b/NAMESPACE @@ -458,7 +458,7 @@ export(plotMSfeature) export(plotMirror) export(plotProfile) export(plotSingleTIC) -export(plot.sample.dist) +export(Plot.sample.dist) export(processMSMSupload) export(savePeakListMetaData) export(setInclusionDataSets) diff --git a/R/batch_effect_utils.R b/R/batch_effect_utils.R index 360ae309..0b2931b9 100644 --- a/R/batch_effect_utils.R +++ b/R/batch_effect_utils.R @@ -747,7 +747,7 @@ PlotPCA.overview <- function(mSetObj, imgName, format="png", dpi=default.dpi, wi #'License: GNU GPL (>= 2) #'@export #' -plot.sample.trend <- function(mSetObj, imgName, format="png", dpi=default.dpi, width=NA,method){ +Plot.sample.trend <- function(mSetObj, imgName, format="png", dpi=default.dpi, width=NA,method){ #mSetObj <- .get.mSet(mSetObj) @@ -797,7 +797,7 @@ plot.sample.trend <- function(mSetObj, imgName, format="png", dpi=default.dpi, w #'@param width width #'@param dpi dpi #'@export -plot.sample.dist <- function(mSetObj=NA, imgName,format="png", width=NA, dpi=default.dpi){ +Plot.sample.dist <- function(mSetObj=NA, imgName,format="png", width=NA, dpi=default.dpi){ library(ggplot2) imgName = paste(imgName, "dpi", dpi, ".", format, sep=""); if(is.na(width)){