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1 change: 1 addition & 0 deletions d4tools/src/create/main.rs
Original file line number Diff line number Diff line change
Expand Up @@ -257,6 +257,7 @@ impl CreateAppCtx {

fn determine_default_denominator(&mut self, matches: &ArgMatches) -> Result<(), DynErr> {
if self.denominator.is_some() {
self.builder.set_denominator(self.denominator.unwrap());
return Ok(());
}

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@@ -0,0 +1,2 @@
${D4TOOLS} create --denominator 100 -g genome.size input.bedgraph ${OUTDIR}/out.d4 && \
${D4TOOLS} view ${OUTDIR}/out.d4
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chr1 1000
chr2 1000
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@@ -0,0 +1,2 @@
chr1 100 200 0.2
chr2 300 400 10.8
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@@ -0,0 +1,6 @@
chr1 0 100 0
chr1 100 200 0.2
chr1 200 1000 0
chr2 0 300 0
chr2 300 400 10.8
chr2 400 1000 0