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@ANSES-Ploufragan

ANSES Ploufragan

bioinformatic team
  • Ploufragan

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  1. SIGffRid SIGffRid Public

    Find two-boxes transcription factor binding sites (made for sigma factor binding sites) by comparing intergenic DNA regions upstream pairs of orthologous genes using statistical analyses

    Perl 4

  2. DUGMO DUGMO Public

    Detection of unknown genetically modified organisms

    Python 1

  3. vvv2_display vvv2_display Public

    Create png file of variants proportions in an assembly/reference including CDS positions using output of vadr 1.5.1 (annotation) and vardict-java 1.8.3 (variant calling)

    Python 1

  4. PrepMedVet_MinION PrepMedVet_MinION Public

    galaxy wf detect pathogens in MinION data

    Python

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