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Annotate laterality of white and gray communicant rami and clean up #56

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Annotate laterality of white and gray communicant rami and clean up #56

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322eada
Fix laterality annotation of white communicating ramus.
napakalas Sep 24, 2025
518a745
Add proxies for non-lateral white communicating ramus.
napakalas Jan 5, 2026
55f91bc
Fix laterality annotation of grey communicating ramus.
napakalas Jan 6, 2026
988442d
Add proxies for non-lateral grey communicating ramus.
napakalas Jan 6, 2026
888146a
Update aliases of T2 gray communicating ramus.
napakalas Jan 6, 2026
3c0ebf9
Reorganize adrenal gland laterality.
napakalas Sep 30, 2025
16a0b99
Remove the aliasing of nasal cavity mucosa to lumen of nasopharynx.
napakalas Jan 8, 2026
edc3b47
Add a proxy for the L2 sympathetic chain ganglion.
napakalas Jan 8, 2026
d0e4123
Fix the name of UBERON:0003040 to the periaqueductal gray of the midb…
napakalas Jan 8, 2026
cfed5ea
Update incorrect aliasing of T1-T3 white rami.
napakalas Jan 15, 2026
f6ecfa9
Remove bolser_8 from anatomical_map so the nerve cuff is rendered cor…
napakalas Jan 16, 2026
ff3fca7
Set an alias in the male map: ILX:0790497 is an alias of ILX:0787082.
napakalas Jan 20, 2026
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14 changes: 9 additions & 5 deletions anatomical_map.json
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Original file line number Diff line number Diff line change
Expand Up @@ -883,6 +883,14 @@
"term": "ILX:0102147",
"name": "Chromaffin cell"
},
"endocrine_7": {
"term": "UBERON:0001233",
"name": "right adrenal gland"
},
"endocrine_8": {
"term": "UBERON:0001234",
"name": "left adrenal gland"
},
"body_1": {
"term": "UBERON:0000019",
"name": "camera-type eye"
Expand Down Expand Up @@ -1241,7 +1249,7 @@
},
"brain_14": {
"term": "UBERON:0003040",
"name": "Ventrolateral Periaqueductal Gray"
"name": "Periaqueductal gray of midbrain"
},
"brain_15": {
"term": "UBERON:0007769",
Expand Down Expand Up @@ -1387,10 +1395,6 @@
"term": "UBERON:0001649",
"name": "glossopharyngeal nerve"
},
"bolser_8": {
"term": "UBERON:0001650",
"name": "hypoglossal nerve"
},
"bolser_16": {
"term": "ILX:0738315",
"name": "Pharyngeal branch of the Hypoglossal nerve"
Expand Down
33 changes: 16 additions & 17 deletions connectivity_terms_female.json
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Original file line number Diff line number Diff line change
Expand Up @@ -466,13 +466,13 @@
},
{
"id": [
"ILX:0787082",
"ILX:0790497",
[]
],
"name": "gray communicating ramus of the first thoracic nerve",
"aliases": [
[
"ILX:0790497",
"ILX:0787082",
[]
]
]
Expand All @@ -492,13 +492,13 @@
},
{
"id": [
"ILX:0787562",
"ILX:0739304",
[]
],
"name": "gray communicating ramus of the third thoracic nerve",
"aliases": [
[
"ILX:0739304",
"ILX:0787562",
[]
]
]
Expand Down Expand Up @@ -563,19 +563,6 @@
]
]
},
{
"id": [
"UBERON:0010061",
[]
],
"name": "lumen of nasopharynx",
"aliases": [
[
"UBERON:0001826",
[]
]
]
},
{
"id": [
"UBERON:0006462",
Expand Down Expand Up @@ -638,9 +625,21 @@
],
"name": "adrenal gland",
"aliases": [
[
"UBERON:0001235",
[
"UBERON:0002369"
]
],
[
"UBERON:0001236",
[]
],
[
"UBERON:0001236",
[
"UBERON:0002369"
]
]
]
},
Expand Down
33 changes: 16 additions & 17 deletions connectivity_terms_male.json
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Original file line number Diff line number Diff line change
Expand Up @@ -479,13 +479,13 @@
},
{
"id": [
"ILX:0787082",
"ILX:0790497",
[]
],
"name": "gray communicating ramus of the first thoracic nerve",
"aliases": [
[
"ILX:0790497",
"ILX:0787082",
[]
]
]
Expand All @@ -505,13 +505,13 @@
},
{
"id": [
"ILX:0787562",
"ILX:0739304",
[]
],
"name": "gray communicating ramus of the third thoracic nerve",
"aliases": [
[
"ILX:0739304",
"ILX:0787562",
[]
]
]
Expand Down Expand Up @@ -576,19 +576,6 @@
]
]
},
{
"id": [
"UBERON:0010061",
[]
],
"name": "lumen of nasopharynx",
"aliases": [
[
"UBERON:0001826",
[]
]
]
},
{
"id": [
"UBERON:0006461",
Expand Down Expand Up @@ -630,9 +617,21 @@
],
"name": "adrenal gland",
"aliases": [
[
"UBERON:0001235",
[
"UBERON:0002369"
]
],
[
"UBERON:0001236",
[]
],
[
"UBERON:0001236",
[
"UBERON:0002369"
]
]
]
},
Expand Down
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