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  1. SomaTar SomaTar Public

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  2. Targeted_SingleEnd Targeted_SingleEnd Public

    Targeted_SingleEnd is a pipeline for analyzing targeted sequencing data (16s, ITS). It is only used for Single End Demultiplexed Illumina Fastq Data using QIIME2.

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  3. loh_plotting loh_plotting Public

    Convert vaf to csv to loh plotting.

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  4. non-overlapping-coords non-overlapping-coords Public

    Find non-overlapping region between overlapped coordinates in a bed file.

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  5. RNA_qc_metrics_extractor_from_BioA_pdf RNA_qc_metrics_extractor_from_BioA_pdf Public

    A Python GUI application to automate the extraction of RNA quality control metrics (RNA concentration (pg/ng per ul), RIN, DV200) from Agilent Bioanalyzer PDF reports. The tool generates a clean, …

    Python 1