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BozyelOzan/README.md

Hi there, I'm Ozan! πŸ‘‹

πŸš€ AI Engineer | Agentic Systems & RAG Architectures | 🧬 Biomedical Engineering

As a Biomedical Engineer by foundation, I leverage my domain expertise to develop advanced AI solutions. I specialize in designing Agentic Workflows, Hybrid RAG systems, and production-ready distributed backend services. I am passionate about building end-to-end AI pipelines that go beyond prototypes β€” from architecture decisions to deployment. Currently exploring modern RAG and CAG (Cache-Augmented Generation) architectures.

πŸ› οΈ Tech Stack & Tools

Python Rust SQL PyTorch TensorFlow HuggingFace LangChain OpenAI OpenCV Pandas NumPy Scikit-Learn XGBoost FastAPI Docker Linux MLflow WandB


πŸ”­ Featured Projects

  • Paperwise β€” Distributed Hybrid RAG System (Active Development)

    • Designed and built an end-to-end hybrid RAG system enabling natural language queries over real-time arXiv paper ingestion.
    • Implemented a dual-collection Qdrant pipeline separating abstract-level semantic selection from full-text chunk retrieval β€” improving mean chunk relevance score from 0.421 to 0.610 across prototypes.
    • Engineered LLM-driven query analysis to extract domain-optimized search terms and rank up to 80 candidate documents by embedding similarity.
    • Evolved architecture from single-process CLI to a distributed microservice system (FastAPI, RabbitMQ worker pool, Redis cache) supporting concurrent multi-user sessions with token-by-token SSE streaming.
    • Developed across 3 self-contained prototypes with documented architecture comparisons; LLM judge evaluation improved from 4.4/5 to 5.0/5 between Prototype 1 and Prototype 2.
  • Clinical Insight Agent (Hybrid RAG)

    • Architected an autonomous agent to query ClinicalTrials.gov, using LangGraph for intelligent routing between SQL and ChromaDB.
    • Developed a real-time ETL pipeline, strictly grounding LLM responses in source records to prevent hallucinations.
    • Deployed an asynchronous FastAPI backend with interactive Streamlit UI.
  • End-to-End Prediction Pipeline with MLOps

    • Built a production-ready ML forecasting pipeline using XGBoost and SOTA algorithms.
    • Accelerated feature engineering using RAPIDS (cuDF) and tracked experiments with MLflow.
  • Brain Tumor Segmentation & Volumetric Analysis

    • Developed a deep learning pipeline to automate Glioblastoma tumor segmentation from raw MRI (DICOM) data using TensorFlow and OpenCV.
    • Calculated precise tumor volumes utilizing DICOM voxel spacing metadata.

πŸ“« Connect with Me

LinkedIn Gmail

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  1. Paperwise-Prototype Paperwise-Prototype Public

    Iterative research assistant built on arXiv β€” evolving from prototype to production, with a Rust core in progress.

    Python

  2. Clinical-Insight-Agent Clinical-Insight-Agent Public

    🧬 An Autonomous AI Agent for Clinical Research. Powered by LangGraph & Gemini Flash, it utilizes Hybrid RAG (SQL + Vector) to intelligently query, analyze, and summarize clinical trial data.

    Python

  3. AI-RAG-Essay-Assistant AI-RAG-Essay-Assistant Public

    A Production-Grade RAG Assistant for Deep Learning Papers using LlamaIndex, Docker, and Groq API.

    Python

  4. end-to-end-energy-forecasting end-to-end-energy-forecasting Public

    Jupyter Notebook