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Welcome to the software-help-guide wiki! In here we will try to list some of the software example scripts and useful information, when using in tandem with Xanadu cluster. In this page our goal is to give some valuable information to the user with some example scripts.

To see all the softwares installed in the cluster, please refer to our main software page in the bioinformatics website.

• Genome Assembly

  • Jellyfish

• Metagenomics

  • Centrifuge
  • HUMAnN2
  • HUMAnN3
  • Kraken
  • Kraken2

• Sequence Alignment/Annotation

  • Braker

• Short Read Alignment and Quality Control

  • Sickle

• Interactive computing platform

  • Juypter