Develop

.gitignore

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+# Ignore Mac system files
+.DS_store
+*.idea
+.idea/*

ansible/OpenPedCan-build.yml

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+---
+- name: OpenPedCan cicd pipeline
+  hosts: OpenPedCan-api
+  connection: local
+  gather_facts: no
+  become: yes
+
+  tasks:
+    - name: This is a build stage
+      include_role:
+        name: OpenPedCan
+        tasks_from: build

ansible/OpenPedCan-deploy.yml

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+---
+- name: deploy stage of OpenPedCan-api pipeline
+  hosts: OpenPedCan-api
+  connection: local
+  gather_facts: no
+
+  tasks:
+    - name: deploy stage
+      include_role:
+        name: OpenPedCan
+        tasks_from: deploy

ansible/agent-setup-icdc.yml

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+---
+- name: setup sumologic and newrelic agents
+  hosts: agent_setup
+  become: yes
+
+  roles:
+    - sumologic-icdc
+    - sumologic-journalctl
+    - newrelic-icdc

ansible/agent-setup.yml

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+---
+- name: setup sumologic and newrelic agents
+  hosts: agent_setup
+  become: yes
+
+  roles:
+    - sumologic
+    - sumologic-journalctl
+    - newrelic

ansible/alb-ops.yml

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+---
+- name: Add/Remove alb rules
+  hosts: docker-local
+  connection: local
+  gather_facts: yes
+
+  tasks:
+    - name: get alb info
+      include_role:
+        name: alb-ops
+        tasks_from: info
+      when: action == "create"
+
+    - name: get alb info
+      include_role:
+        name: alb-ops
+        tasks_from: rules
+      loop:
+        - name: fixed
+          priority: 3
+          listener_arn: "{{https_listener_arn}}"
+        - name: frontend
+          priority: 2
+          listener_arn: "{{https_listener_arn}}"
+        - name: backend
+          priority: 1
+          listener_arn: "{{https_listener_arn}}"
+      when: action == "create"
+
+    - name: remove alb rule
+      include_role:
+        name: alb-ops
+        tasks_from: remove
+      loop:
+        - fixed
+        - frontend
+        - backend
+      when: action == "remove"

ansible/ansible.cfg

@@ -1,4 +1,9 @@
-[defaults]
+[defaults] 
 validate_certs = no
+host_key_checking = False
 ansible_server_cert_validation = no
-inventory      = ./hosts
+inventory      = ./hosts
+
+
+
+

ansible/apm-integrations.yml

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+---
+- name: deploy stage of bento pipeline
+  hosts: "{{tier}}"
+  gather_facts: yes
+
+  tasks:
+    - debug:
+        msg: "{{groups}}"
+    - name: deploy new relic apm integrations
+      include_role:
+        name: newrelic-apm-integration
+

ansible/bento-build.yml

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+---
+- name: bento cicd pipeline
+  hosts: bento
+  connection: local
+  gather_facts: no
+  become: yes
+
+  tasks:
+    - name: This is a build stage
+      include_role:
+        name: bento
+        tasks_from: build
+        vars_from: bento

ansible/bento-ctdc-data-loader.yml

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+---
+- name: load data to neo4j db
+  hosts: all
+  connection: local
+  become: yes
+  gather_facts: yes
+
+  tasks:
+    - name: perform data loading
+      include_role:
+        name: data-processing
+        tasks_from: ctdc-data-loader
+
+      vars:
+
+        data_bucket: bento-ctdc-metadata
+        ansible_python_interpreter: /usr/bin/python2.7

ansible/bento-data-loader.yml

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+---
+- name: load data to neo4j db
+  hosts: all
+  connection: local
+  #become: yes
+  gather_facts: yes
+
+  tasks:
+    - name: perform data loading
+      include_role:
+        name: data-processing
+        tasks_from: bento-data-loader
+      vars:
+        ansible_python_interpreter: /usr/bin/python2.7

ansible/bento-deploy-ctdc.yml

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+---
+- name: deploy stage of bento pipeline
+  hosts: bento
+  connection: local
+  gather_facts: no
+
+  tasks:
+    - name: deploy stage
+      include_role:
+        name: bento
+        tasks_from: deploy-ctdc
+      vars:
+        data_bucket: nci-cbiit-ctdc-{{tier}}

ansible/bento-deploy-dev.yml

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+---
+- name: deploy stage of bento pipeline
+  hosts: bento
+  connection: local
+  gather_facts: no
+
+  tasks:
+    - name: deploy stage
+      include_role:
+        name: bento
+        tasks_from: deploy-dev
+      vars:
+        data_bucket: nci-cbiit-ctdc-{{tier}}

ansible/bento-deploy.yml

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+---
+- name: deploy stage of bento pipeline
+  hosts: bento
+  connection: local
+  gather_facts: no
+
+  tasks:
+    - name: deploy stage
+      include_role:
+        name: bento
+        tasks_from: deploy
+        vars_from: bento
+      vars:
+        data_bucket: nci-cbiit-ctdc-{{tier}}

ansible/bento-docs.yml

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+---
+- name: deploy latest vwersion of Bento documentation
+  hosts: bento
+  connection: local
+  gather_facts: no
+
+  tasks:
+    - name: deploy docs
+      include_role:
+        name: bento-docs
+        tasks_from: build

ansible/bento-es-loader.yml

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+---
+- name: load data to elasticsearch
+  hosts: all
+  connection: local
+  become: yes
+  gather_facts: yes
+
+  tasks:
+    - name: perform data loading
+      include_role:
+        name: data-processing
+        tasks_from: bento-es-loader
+      vars:
+        ansible_python_interpreter: /usr/bin/python2.7

ansible/bento-git-tag.yml

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+- name: Tag bento repository daily
+
+  hosts: localhost
+  connection: local
+
+  vars:
+    retention: 30
+    date_regex: '([12]\d{3}_(0[1-9]|1[0-2])_(0[1-9]|[12]\d|3[01])_(0[1-9]|1[0-2])_([0-5]\d))'
+    current_date: "{{ lookup('pipe','date +%Y_%m_%d_%H_%M') }}"
+    git_tag: "{{current_date}}"
+    git_home: "{{ ansible_env.HOME }}/git-tag"
+
+  vars_files:
+    - config/icdc-env-vars.yaml
+
+  tasks:
+    - name: tag repository
+      include_role:
+        name: git-tag
+      vars:
+        git_url: https://{{git_username}}:{{git_password}}@github.com/CBIIT/{{ branch }}

ansible/build-bento-ccdi.yml

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+---
+- name: bento cicd pipeline
+  hosts: bento
+  connection: local
+  gather_facts: no
+  become: yes
+
+  tasks:
+    - name: This is a build stage
+      include_role:
+        name: bento-ccdi
+        tasks_from: build

ansible/build-bento-ctdc.yml

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+---
+- name: ctdc cicd pipeline
+  hosts: ctdc-local
+  gather_facts: no
+  connection: local
+
+
+  tasks:
+    - name: build bento-ctdc application
+      include_role:
+        name: bento-ctdc
+        tasks_from: build

ansible/build-bento-demo.yml

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+---
+- name: bento cicd pipeline
+  hosts: bento
+  connection: local
+  gather_facts: no
+
+  tasks:
+    - name: This is a build stage
+      include_role:
+        name: bento-demo
+        tasks_from: build

ansible/build-bento-file-downloader.yml

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+---
+- name: bento cicd pipeline
+  hosts: bento
+  connection: local
+  gather_facts: no
+  become: yes
+
+  tasks:
+    - name: This is a build stage
+      include_role:
+        name: bento-file-downloader
+        tasks_from: build

ansible/build-bento-gke.yml

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+---
+- name: bento cicd pipeline
+  hosts: gke
+  connection: local
+  gather_facts: yes
+
+  tasks:
+    - name: This is a build stage
+      include_role:
+        name: bento-gke
+        tasks_from: build

ansible/build-bento-icdc.yml

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+---
+- name: icdc cicd pipeline
+  hosts: icdc-local
+  gather_facts: no
+  connection: local
+
+
+  tasks:
+    - name: build bento-icdc application
+      include_role:
+        name: bento-icdc
+        tasks_from: build

ansible/build-bento-ins.yml

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+---
+- name: bento cicd pipeline
+  hosts: bento
+  connection: local
+  gather_facts: no
+  become: yes
+
+  tasks:
+    - name: This is a build stage
+      include_role:
+        name: bento-ins
+        tasks_from: build

ansible/build-cloud-run.yml

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+---
+- name: bento cicd pipeline
+  hosts: gke
+  connection: local
+  gather_facts: yes
+
+  tasks:
+    - name: This is a build stage
+      include_role:
+        name: bento-cloud-run
+        tasks_from: build

ansible/build-cloudone-ctdc.yml

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+---
+- name: icdc cicd pipeline
+  hosts: ctdc-local
+  gather_facts: no
+  connection: local
+
+
+  tasks:
+    - name: build ctdc application
+      include_role:
+        name: bento-ctdc
+        tasks_from: build