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Weight function bootstrap pull request #223

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2cae399
A first version of weight function that runs using the trial_pp objec…
juliettelimozin Mar 17, 2025
dc89ccc
[skip roxygen] [skip vbump] Roxygen Man Pages Auto Update
github-actions[bot] Mar 17, 2025
1bb2348
Remodel = TRUE version working with correct estimates.
juliettelimozin Mar 19, 2025
482aec0
Adding bootstrap.R to collate
juliettelimozin Mar 19, 2025
14efbed
Merge branch '220-create-weight_func_bootstrap-and-test' of github.co…
juliettelimozin Mar 19, 2025
c452d6d
[skip roxygen] [skip vbump] Roxygen Man Pages Auto Update
github-actions[bot] Mar 19, 2025
966f5af
Removing duplicate collate
juliettelimozin Mar 19, 2025
53cfe17
Merge branch '220-create-weight_func_bootstrap-and-test' of github.co…
juliettelimozin Mar 19, 2025
068ac84
Adding function description
juliettelimozin Mar 19, 2025
06a0f1f
Merge branch 'main' into 220-create-weight_func_bootstrap-and-test
juliettelimozin Mar 19, 2025
3893af8
[skip roxygen] [skip vbump] Roxygen Man Pages Auto Update
github-actions[bot] Mar 19, 2025
efdd70b
Saving description collate change
juliettelimozin Mar 19, 2025
2b4adee
REsolving merge conflict
juliettelimozin Mar 19, 2025
18f1dc3
Fixing error in DESCRIPTION
juliettelimozin Mar 19, 2025
be3d192
Updating roxygen on bootstrap.R
juliettelimozin Mar 19, 2025
68e6497
[skip roxygen] [skip vbump] Roxygen Man Pages Auto Update
github-actions[bot] Mar 19, 2025
116420b
Change export/roxygen setting, comming to get automatoc roxygen updates
juliettelimozin Mar 19, 2025
6e7b88c
[skip roxygen] [skip vbump] Roxygen Man Pages Auto Update
github-actions[bot] Mar 19, 2025
88ccfc5
Fixed some Lint errors in bootstrap.R
juliettelimozin Mar 19, 2025
55c1e82
[skip roxygen] [skip vbump] Roxygen Man Pages Auto Update
github-actions[bot] Mar 19, 2025
ed5c36f
Test script with low tolerance
juliettelimozin Mar 24, 2025
19a9417
Function to calculate CIs
juliettelimozin Apr 3, 2025
b7b2af0
Needed to change required variables in check new data to make sure it…
juliettelimozin Apr 3, 2025
9656d80
Added predict for resampling CI methods using trial_sequence class
juliettelimozin Apr 3, 2025
e85c191
[skip roxygen] [skip vbump] Roxygen Man Pages Auto Update
github-actions[bot] Apr 3, 2025
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1 change: 1 addition & 0 deletions DESCRIPTION
Original file line number Diff line number Diff line change
Expand Up @@ -57,6 +57,7 @@ Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2.9000
Collate:
'RcppExports.R'
'bootstrap.R'
'calculate_weights.R'
'data.R'
'data_extension.R'
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5 changes: 5 additions & 0 deletions NAMESPACE
100755 → 100644
Original file line number Diff line number Diff line change
Expand Up @@ -16,6 +16,7 @@ export(expand_trials)
export(fit_msm)
export(fit_outcome_model)
export(fit_weights_model)
export(function_that_calculates_bootstrap_CIs)
export(initiators)
export(ipw_data)
export(load_expanded_data)
Expand All @@ -37,6 +38,7 @@ export(show_weight_models)
export(stats_glm_logit)
export(trial_msm)
export(trial_sequence)
export(weight_func_bootstrap)
export(weight_model_data_indices)
exportClasses(te_datastore)
exportClasses(te_model_fitter)
Expand All @@ -51,6 +53,8 @@ import(parglm)
importClassesFrom(duckdb,duckdb_connection)
importFrom(DBI,dbGetQuery)
importFrom(Rcpp,sourceCpp)
importFrom(dplyr,"%>%")
importFrom(dplyr,rowwise)
importFrom(lifecycle,deprecated)
importFrom(stats,.checkMFClasses)
importFrom(stats,as.formula)
Expand All @@ -63,6 +67,7 @@ importFrom(stats,glm)
importFrom(stats,model.frame)
importFrom(stats,model.matrix)
importFrom(stats,pnorm)
importFrom(stats,predict.glm)
importFrom(stats,quantile)
importFrom(stats,rbinom)
importFrom(stats,relevel)
Expand Down
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