Nextflow workflow to perform HLA typing from RNAseq data (arcasHLA)
- samplesheet: Path to a CSV with columns for sample, fastq_1, and fastq_2
- genomeDir: Path to a folder containing the STAR index for chr6
- outdir: Output folder path
CirroBio/nf-arcashla
Folders and files
| Name | Name | Last commit date | ||
|---|---|---|---|---|