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fixes ants module version, and also style #8

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fixes ants module version, and also style #8

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@rueberger rueberger commented Mar 1, 2023

i am not sure what people are running on sherlock because antspy/0.2.2 has been deprecated for like a year, but here is a hotfix that loads the new module name, and also does a bunch of style updates because i have black on a post-save hook

@rueberger rueberger assigned rueberger and bellabrez and unassigned rueberger Mar 1, 2023
rueberger and others added 26 commits March 1, 2023 15:46
@rueberger
fixes ants module version, python 3.6
0032861
@ilanazs
updated user json Ilana
4ab0e10
@ilanazs
change user file back for now
e0520f2
@ilanazs
made new notebook for correlation analysis
26ab5ae
@ilanazs
adding notebook
b922587
@ilanazs
update notebooks
c758d9a
@ilanazs
clean notebook, new corr notebook
4b8898a
@ilanazs
background subtraction added
0d72cf9
@ilanazs
background subtraction in .sh
43c69d4
@ilanazs
background subtraction in .sh
b1e0064
@ilanazs
fixing stupid bugs
5df712b
@ilanazs
editing background subtraction
c9a3017
@ilanazs
bg edits
9bf6a2a
@ilanazs
trying to fix bugs
0abc31e
@ilanazs
chaged save path bg
c4e4b06
@ilanazs
messed up
c43c03f
@ilanazs
path
cf484f2
@ilanazs
shit
a427892
@ilanazs
shit
298ee8f
@ilanazs
Merge branch 'hotfix' of https://github.com/ClandininLab/brainsss int…
c8f850e 
…o hotfix
@ilanazs
name changes
280cb40
@ilanazs
fix for different sized brains
cd246d3
@ilanazs
make_supervoxels for all shape brains
66c39d7
@ilanazs
more mem to bg
7ad1450
@ilanazs
remove print statement
07daff4
@ilanazs
printlog not working in visual
3500c1d
ilanazs added 30 commits June 10, 2024 10:57
@ilanazs
creating averaging and df scripts
747e2a7
@ilanazs
trialavg complete i think
17670ae
@ilanazs
adding flag for building ch1
627cec3
@ilanazs
forgot to add arg
48526b3
@ilanazs
easy access second channel?
2ecdba1
@ilanazs
add ch num to corr
dfaec47
@ilanazs
hard coding WHY???
1a44b32
@ilanazs
uhh weird
39eb70a
@ilanazs
messed up arg name whoops
17fb1dc
@ilanazs
change save file
31267d5
@ilanazs
add ch num
2466a9e
@ilanazs
fixing naming for consistency
19f61e0
@ilanazs
fixing labeling
6b90c4a
@ilanazs
forgot a )
51d11ec
@ilanazs
print channel
fea0dd0
@ilanazs
trying for ease of rebuilding new channel
804eb12
@ilanazs
adding funcs to brain_utils for ease
a7f5dbe
@ilanazs
idk
6cb6be9
@ilanazs
Merge branch 'hotfix' of https://github.com/ClandininLab/brainsss int…
6bc6133 
…o hotfix
@ilanazs
fixed warp code
cf30e58
@ilanazs
warp for raw ddata
02d059a
@ilanazs
pre big fix
a217af2
@ilanazs
got rid of apply_transforms in pipeline
fd90ee0
@ilanazs
idk what i did wrong here
01fdc1e
@ilanazs
adding new notebooks
2658630
@ilanazs
new STA code
e58481f
@ilanazs
whoops changed name
c3300d1
@ilanazs
fixing clean STA
3d1b40a
@ilanazs
readded apply transforms
dec4cb3
@ilanazs
Merge branch 'hotfix' of https://github.com/ClandininLab/brainsss int…
1562fa2 
…o hotfix
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@rueberger @bellabrez @ilanazs