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add list of verified organism to typing report#217

Merged
karlnyr merged 1 commit intorc4.2.7from
add-organism-limitations-reports
Nov 10, 2025
Merged

add list of verified organism to typing report#217
karlnyr merged 1 commit intorc4.2.7from
add-organism-limitations-reports

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@karlnyr
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@karlnyr karlnyr commented Nov 7, 2025

Description

Added

  • List of verified organisms to the limitations section of the typing report

Primary function of PR

  • Hot-fix
  • Patch
  • Minor functionality improvement
  • New type of analysis
  • Backward-breaking functionality improvement
  • This change requires internal documents to be updated
  • This change requires another repository to be updated

Testing

  • bash /home/proj/production/servers/resources/hasta.scilifelab.se/install-microsalt-stage.sh BRANCHNAME
  • us
  • conda activate S_microSALT
  • microSALT analyse --input /path/to/fastq/ SAMPLEINFO_FILE

Test results

These are the results of the tests, and necessary conclusions, that prove the stability of the PR.

Sign-offs

  • Approved to run at Clinical-Genomics by @karlnyr or @Clinical-Genomics/micro

@karlnyr karlnyr requested a review from a team as a code owner November 7, 2025 09:52
@karlnyr karlnyr merged commit 9cf7581 into rc4.2.7 Nov 10, 2025
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2 participants