v0.16

• Bug fixes in generate_hamilton_input_make_cst.py and populate_batch_id.py

v0.15

• New script for generating Human Tissue Storage Reports
  • Details on samples recorded in the LIMS as being currently stored in the lab
  • New config: human_tissue.recipients

v0.14

• Remove tracking letter from customer manifest

v0.13

• Updating EGCG-Core to v0.11.1
• New pooling and CST workflow scripts:
  • autoplacement_8_well.py
  • check_index_compatibility.py
  • check_plates_libraries_indexes.py
  • generate_hamilton_input_make_cst.py
  • generate_hamilton_input_make_pdp.py
  • generate_hamilton_input_make_pdp_mix.py
  • populate_batch_id.py
  • populate_pool_batch_and_pools.py
  • transfer_udf_input_output.py

v0.12.3

• 'gender' API key renamed to 'sex'

v0.12.2

copy_samples.py: “Comments” step UDF in “Remove from processing” step now populated with description “Repeat samples requested.”

v0.12.1

• common.py - Bugfix to allow naming of SGP tube racks

v0.12

New scripts:

• copy_samples.py : Create new samples from the ones in the step.
• generate_hamilton_input_qpcr_dilution.py: Generate Hamilton input file for the the QPCR dilution
• next_step_assignment_spectramax.py: Set next step after spectramax step
  Other changes:
• next_step_assignment_sample_receipt.py: Change Step UDF name
• common.py: add finish_step function to safely finish an "in progress" step

v0.11.2

• assign_workflow_post_receive_sample.py: routing FluidX tubes to FluidX receipt/transfer workflow
• create_samples.py: fixing container name regexes
• create_sample_tracking_letter.py: removing single input container constraint
• generate_hamilton_input_UPL.py: fixing blank lines in output file
• generate_manifest.py: fixing UDF parsing - reverting refactor
• parse_fluidx_scan.py: adding container name check
• fixing StepEPP max_nb_input_container_types

v0.11.1

• Fix for unexpected NotImplementedError in spectramax.py
• Configurable workflow stage names for assigning samples to PCR-free/Nano/KAPA/Quant
• Fixed KAPA workflow stage name
• Fixed autoplacement input columns
• Binary file support
• Customer manifest email template
• new scripts:
  • assign_workflow_post_receive_sample.py
  • create_sample_tracking_letter.py
  • create_samples.py
  • email_container_dispatched.py
  • email_container_ready_for_dispatch.py
  • email_manifest_tracking_letter_customer.py
  • email_sample_review.py
  • generate_sample_manifest.py
  • next_step_assignment_sample_receipt.py
  • next_step_assignment_udf.py
  • parse_fluidx_scan.py
  • parse_manifest.py
  • project_udfs_to_step_udfs.py
  • step_udf_completion_check.py