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GavinHaLab / ichorCNA Public

forked from broadinstitute/ichorCNA

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Fix counting reads when sex chromosomes aren't available#26

Open

lbeltrame wants to merge 2 commits intoGavinHaLab:masterGavinHaLab/ichorCNA:masterfrom

DIncalciLab:fix-gender-countsDIncalciLab/ichorCNA:fix-gender-countsCopy head branch name to clipboard

Conversation Commits2 (2)Checks Files changed

Open

Fix counting reads when sex chromosomes aren't available#26
lbeltrame wants to merge 2 commits intoGavinHaLab:masterfrom
DIncalciLab:fix-gender-counts

Commits

Commits on Dec 2, 2025

Set chrX median counts to NA if gender is unknown
lbeltrame
committed
Adjust uses of counts so that they can take account also being NA
lbeltrame
committed

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