tAge

R package for transcriptomic age prediction from gene expression data.

Installation

devtools::install_github("Gladyshev-Lab/tAge")

Usage

library(tAge)

# Preprocess expression data
processed <- tAge_preprocessing(eset, gene_list, species = "mouse")

# Predict transcriptomic age
results <- predict_tAge(processed$scaled,
                        model_path = "path/to/model.pkl",
                        species = "mouse")

Citation

Transcriptomic Hallmarks of Mortality Reveal Universal and Specific Mechanisms of Aging, Chronic Disease, and Rejuvenation (Tyshkovskiy et al. 2024)

License

MIT