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use process unique file naming for kwave files #234

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bed9c5e
use process unique file naming for kwave files
cbender98 Apr 27, 2023
cf2c1d5
Merge branch 'develop' into T215_NameKwaveFiles
kdreher Jun 17, 2024
5b5afd8
refactor and add comments
jnoelke Jul 26, 2024
e6c3a87
add the unique file naming for the 3d simulation
jnoelke Jul 26, 2024
a5d1f2a
Merge branch 'develop' into T215_NameKwaveFiles
jnoelke Jul 26, 2024
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17 changes: 16 additions & 1 deletion simpa/core/simulation_modules/acoustic_forward_module/simulate_2D.m
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Original file line number Diff line number Diff line change
Expand Up @@ -147,11 +147,26 @@
datacast = 'single';
end

% Extract the filename from the optical path, add the current time in milliseconds,
% and add the process id to make the filename unique

% Extract basename from the optical path
[~, basename, ~] = fileparts(optical_path);

% Get current time in HH-mm-ss-SSS format
date_str = char(datetime('now', 'Format', 'HH-mm-ss-SSS'));

% Get the process id
pid = feature('GetPid');

% Construct the unique temporary path name
tmp_path_name = sprintf('kwave__%s__%s__%d', basename, date_str, pid);

input_args = {'DataCast', datacast, 'PMLInside', settings.pml_inside, ...
'PMLAlpha', settings.pml_alpha, 'PMLSize', 'auto', ...
'PlotPML', settings.plot_pml, 'RecordMovie', settings.record_movie, ...
'MovieName', settings.movie_name, 'PlotScale', [-1, 1], 'LogScale', settings.acoustic_log_scale, ...
'Smooth', p0_smoothing};
'Smooth', p0_smoothing, 'DataName', tmp_path_name};

if settings.gpu == true
time_series_data = kspaceFirstOrder2DG(kgrid, medium, source, sensor, input_args{:});
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17 changes: 16 additions & 1 deletion simpa/core/simulation_modules/acoustic_forward_module/simulate_3D.m
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Original file line number Diff line number Diff line change
Expand Up @@ -148,11 +148,26 @@
datacast = 'single';
end

% Extract the filename from the optical path, add the current time in milliseconds,
% and add the process id to make the filename unique

% Extract basename from the optical path
[~, basename, ~] = fileparts(optical_path);

% Get current time in HH-mm-ss-SSS format
date_str = char(datetime('now', 'Format', 'HH-mm-ss-SSS'));

% Get the process id
pid = feature('GetPid');

% Construct the unique temporary path name
tmp_path_name = sprintf('kwave__%s__%s__%d', basename, date_str, pid);

input_args = {'DataCast', datacast, 'PMLInside', settings.pml_inside, ...
'PMLAlpha', double(settings.pml_alpha), 'PMLSize', 'auto', ...
'PlotPML', settings.plot_pml, 'RecordMovie', settings.record_movie, ...
'MovieName', settings.movie_name, 'PlotScale', [-1, 1], 'LogScale', settings.acoustic_log_scale, ...
'Smooth', p0_smoothing};
'Smooth', p0_smoothing, 'DataName', tmp_path_name};

if settings.gpu == true
time_series_data = kspaceFirstOrder3DG(kgrid, medium, source, sensor, input_args{:});
Expand Down