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25 Open 123 Closed
25 Open 123 Closed
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Issues list

Deprecation warning: Loading egg is deprecated and will be blocked in pip 25.1
#161 opened May 4, 2025 by BenjaminDEMAILLE
Why ##reference=GRCh37/hg19 is added when working with GRCh38
#160 opened Apr 24, 2025 by Manuel-DominguezCBG
CUDA Error
#158 opened Mar 26, 2025 by beyza-kurtoglu
1
Implementations of models for 80nt, 400nt and 2K context
#157 opened Feb 18, 2025 by qxdu
1
SpliceAI run time is too long
#156 opened Feb 13, 2025 by Roshanshafiha
2
I failed to reproduce SpliceAI training based on the source code.
#155 opened Jan 29, 2025 by shiro-kur
6
Variant present in SpliceAI lookup absent in spliceai_scores.masked.snv.hg19.vcf.gz
#154 opened Jan 26, 2025 by Roshanshafiha
4
Help with scoring custom sequence
#153 opened Jan 9, 2025 by albustruong
Mask not computed correctly. Possible off-by-1 error?
#152 opened Nov 4, 2024 by bw2
1
No training configuration found in save file
#151 opened Sep 2, 2024 by YS-Github-bug
1
Delta positon score interpretation for deletions.
#150 opened Aug 23, 2024 by drjraclarke
Figure 1c Reproduction
#149 opened Jul 16, 2024 by prakruthiburra
3
Way to many TEMP files
#148 opened Jul 1, 2024 by ttys42
WARNING:root:Skipping record (ref too long)
#147 opened Jun 28, 2024 by Zer0day-0
spliceai score
#145 opened Feb 15, 2024 by jml96
3
How to make a custom annotation set?
#143 opened Jan 2, 2024 by dudududu12138
4
build-in grch38 annotation
#142 opened Nov 9, 2023 by yanwang271
Running Short Tandem Repeat genotypes
#141 opened Nov 6, 2023 by Nehir291
Unable to install using conda install
#140 opened Oct 4, 2023 by rodrigodealexandre
1
Duplicate records in the released VCF file
#139 opened Sep 29, 2023 by lacek
3
Running SpliceAI takes too much time
#138 opened Sep 14, 2023 by gswsqffsapd3056
1
variant not scored
#137 opened Aug 30, 2023 by carolinehey
5
Question about using snv and indel score files
#136 opened Aug 29, 2023 by cgy0627
Upgrade Libraries and deal with multi-nucleotide polymorphisms (MNP)
#109 opened Aug 25, 2022 by sicotteh
Scores generated by newer GPUs are very odd.
#99 opened Feb 16, 2022 by Luobiny
5
ProTip! What’s not been updated in a month: updated:<2025-05-02.