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Johan Nystrom-Persson edited this page May 19, 2025 · 14 revisions

Welcome to the Slacken wiki.

General

Slacken commands overview

AWS

Classifying metagenomic samples on AWS Elastic MapReduce

Pre-built Slacken indexes on Amazon S3

AWS EMR best practices

CAMI2 analysis

Downloading and preparing CAMI2 samples

Comparing samples against a reference mapping