Releases: JasonAHendry/nomadic
Releases · JasonAHendry/nomadic
Version 0.7.2
What's Changed
- Fix issue with loading metadata file from shared workspace, append current workspace name by @danieljbridges in #73
Full Changelog: v0.7.1...v0.7.2
Version 0.7.1
What's Changed
- Ensure minknow subdirectories are not copied by @danieljbridges in #71
- Make config parsing more resilient by @berndbohmeier in #72
Full Changelog: v0.7.0...v0.7.1
Version 0.7.0
What's Changed
This version adds various features for data management
- Add prompt for workspace name by @JasonAHendry in #58
- Adjust web browser launch to occur after dashboard by @JasonAHendry in #59
- Addition of Backup feature by @danieljbridges in #55
- Addition of share command by @danieljbridges in #60
- Add option to check if files are up to date by checksum by @berndbohmeier in #63
- Improve share command by @berndbohmeier in #65
- Experimenta Templates, allow to read directly from excel files by @danieljbridges in #69
- Backup to ssh by @berndbohmeier in #67
- Improve usability of workspace by @berndbohmeier in #70
New Contributors
- @danieljbridges made their first contribution in #55
Full Changelog: v0.6.0...v0.7.0
Version 0.6.0
What's Changed
- Add delve for variant calling by @berndbohmeier in #53
- Enable starting an Anopheles gambiae workspace by @JasonAHendry in #54
- Correcting Metadatafile columns by @berndbohmeier in #57
- Add process command by @berndbohmeier in #56
- Remove index from summary.variants.csv by @danieljbridges in 0f155c2
- Ensure we write a sample id also for unclassified by @berndbohmeier in 53341f4
- Allow sample_id to be not unique by @berndbohmeier in 0819f82
Full Changelog: v0.5.0...v0.6.0
Version 0.5.0
What's Changed
- Add better wording for the dashboard by @berndbohmeier in #45
- Implement smart autocompletion by @berndbohmeier in #46
- Summary files renaming by @berndbohmeier in #47
- Fix experiment name not derived correctly by @berndbohmeier in #48
- Retain unfiltered VCF file by @JasonAHendry in #50
Full Changelog: v0.4.0...v0.5.0
Version 0.4.0
What's Changed
- Ensure nomadic can be packaged by @berndbohmeier in #24
- New data files layout by @berndbohmeier in #26
- Resilient processing by @berndbohmeier in #27
- Auto open browser by @berndbohmeier in #28
- Fix handle space in shell commands by @berndbohmeier in #31
- Move resources to user data folder by @berndbohmeier in #32
- Show sample by @berndbohmeier in #29
- Add footer with documentation link and github by @berndbohmeier in #39
- Fix not having to press control c twice by @berndbohmeier in #35
- Handle also tab limited metadata files by @berndbohmeier in #33
- Allow fastqdir path to not exist yet by @berndbohmeier in #38
- Save start parameters by @berndbohmeier in #36
- Make sure not heavy libs are imported to keep cli fast by @berndbohmeier in #40
- Add documentation @JasonAHendry in #30
Full Changelog: v0.3.0...v0.4.0
Version 0.3.0
v0.3.0 Typo