Feature/rrfs dev1 #2
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* Updating CONUS 3km grid for FFG file interpolation. * Slightly revised grid specs for RRFS_CONUS_3km domain, and committing the UPP fix files which allow output of ARI exceedances. * Fixing typo
* Minor bug fix in JREGIONAL_RUN_PYTHON_GRAPHICS * limit the bug fix to RTMA
* Updating fix files to output GOES-16 simulated brightness temps. * Including the new GOES-16 simulated satellite brightness temps in smaller distributed files. * Correcting the names of the new fields in testbed .txt file. Fields appear differently with different versions of wgrib2!
* Point to hourly GEFS data for the ensemble LBCs * Update set_extrn_mdl_params.sh Remove the hardcoded hourly GEFS data location in the previous commit and add the capability of user-defined EXTRN_MDL_SOURCE_BASEDIR_ICS and EXTRN_MDL_SOURCE_BASEDIR_LBCS for GEFS data on Jet, which can be defined in config.sh * Update config.sh.RRFS_CONUS_3km_ens.2022HWT.CYCL Define the location of the hourly GEFS data for the LBCs
* Changes for using netcdf diag in GSI and EnKF * Correct diag name for dbz * Fix the diag files
1) changing the name of the starting satbias files in the GSI script; 2) updating global_satinfo.txt, turning off NPP CrIS-FSR data and adding lists for new instruments (amsua/mhs/iasi from metop-c etc.); 3) updating gsiparm.anl.sh for new data sets (amsua/mhs from metop-c etc.).
…es_cube (#425) in make_ics and make_lbcs.
* add ifi to post files * correct name of IFI grib file * Updating exregional_run_post.sh for the new IFI GRIB2 files. * Updating exregional_run_wgrib2 to handle new icing fields. Using nearest neighbour interpolation for now. * update IFI variable numbers * Updating fix file to be consistent with latest UPP. It has been tested on Jet. Co-authored-by: eric james <eric.james@noaa.gov> Co-authored-by: Ming Hu <Ming.Hu@noaa.gov>
Co-authored-by: ming hu <ming.hu@alogin01.acorn.wcoss2.ncep.noaa.gov>
…ministic analysis and adding tasks for additional ensemble free forecast (#429)
* Add cycle-specific stochastics namelists * Update exregional_run_fcst.sh
Turn on GOES-17 assimilation for the AMV tyes we currently assimilate from GOES-16
* "update regional workflow for RRFS-SD" * "Add CONUS 3km smoke&dust, rrfs_sd is dynamically determined by DO_SMOKE_DUST"
Added scripts to combine surface and atmosphere grib2 files when uses GEFS forecast as initial condition on wcoss2. Co-authored-by: ming hu <ming.hu@clogin03.cactus.wcoss2.ncep.noaa.gov>
Remove namelist option for NETCDF_IO, which was removed from the model code already. Fix a bug from WCOSS2 updates ( because combine GEFS grib2 files).
Small bug fixes.
Co-authored-by: ming hu <ming.hu@clogin03.cactus.wcoss2.ncep.noaa.gov>
* Save diag and fit files from GSI analysis. Add post analysis task to run soil nudging and updateBC. * Update configure files for CONUS 3km real-time and retro runs. * Update diag_table based on Tanya's comment Update configure for CONUS 3m real-time and retro runs. Co-authored-by: ming hu <ming.hu@clogin03.cactus.wcoss2.ncep.noaa.gov>
1) add namelist options for running CLM 2) add diag file for CLM 3) add lake surgery
…when running SDLVDL (#562) Increase node usage for recentering
Co-authored-by: ming hu <ming.hu@clogin07.cactus.wcoss2.ncep.noaa.gov>
* fewer post ifi fields * also update fv3lam_rrfs.xml * update fix/upp/fv3lam_post_avblflds.xml to match post src/UPP/parm/post_avblflds.xml
…annels due to RRFS's 2mb model top. (#564)
* Add PM task in workflow to convert PM observation from ASCII to PrepBUFR, which is used for PM DA. * Add comments of required variables * Update some comments. --------- Co-authored-by: Ruifang.Li <Ruifang.Li@noaa.gov>
* Save stdout for EnKF radardbz analysis Remove Jet local directories from config.sh.RRFS_CONUS_3km_ens Remove specification of "NET" from config.sh.RRFS_CONUS_3km and config.sh.RRFS_CONUS_3km_ens, and change the file dependencies of the ensctrl grib2 files for ensemble_maps and enspost * Update exregional_run_prepstart.sh
Co-authored-by: benjamin blake <benjamin.blake@dlogin05.dogwood.wcoss2.ncep.noaa.gov>
* Refine GSI PM DA for RRFS_SD model modified: anavinfo.rrfs_sd new file: berror.rrfs_sd modified: ../../scripts/exregional_run_analysis.sh modified: ../../ush/config_defaults.sh modified: ../../ush/templates/FV3LAM_wflow.xml * Modify FV3LAM_wflow.xml to remove dependence on SD_DA * Update dependences on SD_DA * 1. SD DA updates local tracer files 2. Update smoke,dust tracers Changes to be committed: modified: scripts/exregional_run_analysis.sh modified: scripts/exregional_run_postanal.sh modified: ush/templates/FV3LAM_wflow.xml * Remove DO_SDDACYCE Change dependece to PREP_CYC_TN
* Remove OBS_TYPE in gsidiag task and add function to check conv_dbz (SDL/VDL) work directory. * Remove un-used parameters in gsidiag.
Change the node/ppn for recenter task
* enhancements and bug fix for v0.7.1:
1) max_output_fields = 500
2) run soil/lake surgery using operation rap/hrrr
3) use netcdf parallel for model forecast product IO
* Add function to cycle surface and satbias from a common location
during machine switch and system version update.
Turn on smoke/dust and CLM for EnKF DA cycles.
* Add ${APRUN} to all executables in exregional_run_prepstart.sh
* Make output file type as an option in configure:
WRTCMP_output_file = netcdf_parallel
will turn on the parallel netcdf IO and compression.
* Only skip cold start gsi on WCOSS2 for now.
Cold start GSI crashes on WCOSS2.
---------
Co-authored-by: ming hu <ming.hu@clogin07.cactus.wcoss2.ncep.noaa.gov>
Co-authored-by: ming hu <ming.hu@dlogin03.dogwood.wcoss2.ncep.noaa.gov>
Co-authored-by: ming hu <ming.hu@dlogin05.dogwood.wcoss2.ncep.noaa.gov>
…RRFS_B. (#579) Turn on FVCOM on RRFS_B.
Co-authored-by: ming hu <ming.hu@dlogin05.dogwood.wcoss2.ncep.noaa.gov>
#580) * initial script changes for hydrometeor uncertainty with RTMA parallel cloud code * add conditionals for uncertainty file links
* Initial updates to enable the HAILCAST diagnostic output in RRFS * Change output array name from upper case to lower case * Updating UPP control files
… be used in the model forecast. (#587)
…ions (#589) * stricter gross error check for radar reflectivity observations * Update exregional_process_radarref.sh * modify thinning of reflectivity observations For the EnVar analysis, use fewer observations in precipitation (i.e., more thinning). For the EnKF analysis, use more "no-precipitation" observations (i.e., less thinning). * add namelist parameter for dbz obs error inflation to gsiparm.anl.sh
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DESCRIPTION OF CHANGES:
Change a few namelist entries to enable 15-minute output with 15-minute time-maximum reflectivity and UH fields
TESTS CONDUCTED:
Various single FV3 runs within retros.
DEPENDENCIES:
none known
DOCUMENTATION:
none
ISSUE (optional):
none known
CONTRIBUTORS (optional):
Craig Hartsough