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LUMC / HAMLET Public

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fixes in criteria for inclusion and annotation#49

Merged

Redmar-van-den-Berg merged 10 commits intoLUMC:mainLUMC/HAMLET:mainfrom

AnnevdGrinten:mainAnnevdGrinten/HAMLET:mainCopy head branch name to clipboard

Feb 10, 2026

Conversation Commits10 (10)Checks Files changed

Merged

fixes in criteria for inclusion and annotation#49
Redmar-van-den-Berg merged 10 commits intoLUMC:mainfrom
AnnevdGrinten:main

Commits

Commits on Feb 2, 2026

include gene MPL and delete duplicate rows
AnnevdGrinten
authored
fix nr of columns for MPL
AnnevdGrinten
authored
Add start end for alt exon transcripts TP53 RUNX1
AnnevdGrinten
authored
Add protein_altering_variant
AnnevdGrinten
authored
change `discard` to `likely benign`
AnnevdGrinten
authored

Commits on Feb 3, 2026

change `discard` to `likely benign`
AnnevdGrinten
authored
unify logic for all genes
AnnevdGrinten
authored
add gene MPL
AnnevdGrinten
authored

Commits on Feb 10, 2026

Annotate other variants in WT1 ex7+9 `possible pathogenic`
AnnevdGrinten
authored
Add more known pathogenic variants
AnnevdGrinten
authored

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