Release 4.3.0

Updates in this release:

• Updated to R 4.4.3 to resolve vulnerability CVE-2024-27322 https://nvd.nist.gov/vuln/detail/CVE-2024-27322
  - This vulnerability enabled a maliciously crafted RDS (R Data Serialization) formatted file or R package to run arbitrary code on an end user’s system when interacted with
• Updated packages in the R image
  - Removed basemap, r-lwgeom and r-tmap packages to be able to update R
• Security updates and better error handling for the API

v4.3.0-uat

• Updated R to 4.4 to resolve vulnerability CVE 2024-27322

Release 4.2.0

Breaking Changes
^^^^^^^^^^^^^^^^^^^

• Updated most packages in all four base images. The Pangeo, isce3, and python images are pinned to versions in pangeo-notebook 2024.11.11 version. Important package updates are
  • R image: R from 4.2 to 4.3, added rhdf5 from Bioconductor, lidR, and lasR
  • Pangeo image: Xarray now 2024.10, Geopandas 1.0+, Numpy 2.0+, Python 3.12
  • More all update package information here: https://github.com/MAAP-Project/maap-workspaces/pull/169/files
• All images running on MAAP will now be using mini-forge to avoid licensing issues. Impacts:
  • All conda installs will now pull from conda-forge
  • No longer using R channel on anaconda (also continuing to not use the defaults channel)
  • If you cannot find your package on conda-forge or another open source community channel, we recommend installing your package from their install instructions on their GitHub README or contact the platform team.
  • Anaconda's new terms: https://www.anaconda.com/pricing/terms-of-service-faqs

Added
^^^^^^^^^^^^^^^^^^^

• Container URL in Algorithm Registration UI is now a dropdown where the default is the maap_base image which is the fastest for algorithm registration
  • Users who would like to use this faster maap_base option must self manage their packages (i.e. in an environment.yml). More information in the docs here
• Added more packages requested by users for the R image, especially Geotrees specific packages like lasR, partykit, BIOMASS and tidyterra
• The Algorithm-Registration UI input-boxes are narrower to help reduce the need for horizontal scrolling
• Improvements to the Jobs UI: added job duration and more a obvious cancel button, and cleaned up the filter controls
• Using the maap_base image as the base image for all workspace images

Fixed
^^^^^^^^^^^^^^^^^^^

• Public ssh key is now correctly being pulled from MAAP profile page into /projects/.ssh/authorized_keys upon workspace launch if it was not already present
• Display SSH info giving undefined error resolved
• Fixed status filtering issues for Jobs UI
• Fixed a broken documentation link that shows up during algorithm registration

v4.2.0 pre-release

Breaking Changes
^^^^^^^^^^^^^^^^^^^

• Updated most packages in all four base images. The Pangeo, isce3, and python images are pinned to versions in pangeo-notebook 2024.11.11 version
• All images running on MAAP will now be using mini-forge to avoid licensing issues. Impacts:
  • All conda installs will now pull from conda-forge
  • No longer using R channel on anaconda (also continuing to not use the defaults channel)
  • If you cannot find your package on conda-forge or another open source community channel, we recommend installing your package from their install instructions on their GitHub README or contact the platform team.
  • Anaconda's new terms: https://www.anaconda.com/pricing/terms-of-service-faqs

Added
^^^^^^^^^^^^^^^^^^^

• Container URL in Algorithm Registration UI is now a dropdown where the default is the maap_base image which is the fastest for algorithm registration
  • Users who would like to use this faster maap_base option must self manage their packages (i.e. in an environment.yml). More information in the docs here <system_reference_guide/algorithm_registration.html#Container-URLs>_
• Added more packages requested by users for the R image, especially Geotrees specific packages like lasR, partykit, BIOMASS and tidyterra
• The Algorithm-Registration UI input-boxes are narrower to help reduce the need for horizontal scrolling
• Improvements to the Jobs UI: added job duration and more a obvious cancel button, and cleaned up the filter controls
• Using the maap_base image as the base image for all workspace images

Fixed
^^^^^^^^^^^^^^^^^^^

• Public ssh key is now correctly being pulled from MAAP profile page into /projects/.ssh/authorized_keys upon workspace launch if it was not already present
• Display SSH info giving undefined error resolved
• Fixed status filtering issues for Jobs UI
• Fixed a broken documentation link that shows up during algorithm registration

v4.1.1 Release

What's Changed

• Removed pygeos from all base images by @grallewellyn in #148
• Increase number of jobs in UI to 200 by @marjo-luc in #147 and #150

Full Changelog: v4.1.0...v4.1.1

v4.1.1-uat

What's Changed

• Removed pygeos from all base images by @grallewellyn in #148
• Increase number of jobs in UI to 200 by @marjo-luc in #147 and #150

v4.1.0

What's Changed

• Feature/upgrade pangeo extensions by @grallewellyn in #145
• Feature/update maap help tour by @grallewellyn in #61
• Bugs/presigned url by @grallewellyn in #62
• Added memory extension by @grallewellyn in #59
• hysds base-image [skip ci] by @bsatoriu in #65
• Feature/libmamba solver by @grallewellyn in #64
• Update stac_ipyleaflet to 0.3.5 for Pangeo by @anilnatha in #66
• Remove hysds base_image [skip-ci] by @bsatoriu in #68
• Bugs/quick fix libmamba by @grallewellyn in #69
• Bugs/presigned url by @grallewellyn in #70
• Bugs/git tour link by @grallewellyn in #71
• updated custom ext versions by @marjo-luc in #72
• Feature/update maap py by @grallewellyn in #73
• bumped jupyter server extension by @marjo-luc in #74
• Bump maap-py to v3.1.3 by @bsatoriu in #75
• Bugs/libmamba default by @grallewellyn in #77
• Update entrypoint.sh by @bsatoriu in #78
• Bugs/double submit null username by @grallewellyn in #79
• Features/update workspace dependencies by @grallewellyn in #80
• Feature/conda forge default by @grallewellyn in #81
• Feature/missing r package by @grallewellyn in #83
• Add stac_ipyleaflet by @anilnatha in #84
• Feature/triaged job folder by @grallewellyn in #88
• Fix s3fs sidecar image urls by @bsatoriu in #89
• Bug/update dps version by @grallewellyn in #90
• Bug/jlab launch error by @grallewellyn in #94
• Add additional packages to Pangeo by @anilnatha in #93
• Awscli bug by @grallewellyn in #95
• Feature/move rio tiler by @grallewellyn in #86
• Removed ability to build and launch ISCE2 and RGEDI images/workspaces. by @anilnatha in #96
• Feature/update maap help by @grallewellyn in #97
• Feature/update s3fs by @grallewellyn in #98
• Bug/resolve merge conflicts by @grallewellyn in #101
• upgrade maap-py to v3.1.5 by @grallewellyn in #102
• Update devfile metadata by @bsatoriu in #103
• Bug/missing maap cfg by @grallewellyn in #104
• Bug/maap py dependency errors by @grallewellyn in #106
• Bug/add maap py var by @grallewellyn in #107
• Feature/extract jupyter extension installs by @grallewellyn in #110
• Bug/remove conda run by @grallewellyn in #112
• Feature/jlab4 upgrade by @marjo-luc in #113
• Feature/extract plotly by @grallewellyn in #115
• Feature/update packages by @grallewellyn in #114
• Add devfile docker path env vars by @bsatoriu in #117
• Feature/rename workspaces by @anilnatha in #116
• Feature/add unzip by @grallewellyn in #118
• Create devfile_compile.py by @bsatoriu in #121
• Feature/no maap cfg by @grallewellyn in #120
• Update workspace yaml by @anilnatha in #124
• Update Python devfile.yaml DOCKERIMAGE_PATH env by @bsatoriu in #125
• Bug/update maap host by @grallewellyn in #126
• Algorithm registration links now open in a new tab by @grallewellyn in #127
• Add JWT proxy container to workspaces by @bsatoriu in #128
• Remove maap cfg from algorithms extension by @grallewellyn in #129
• Feature/remove api endpoint by @grallewellyn in #130
• Bug/presigned url relative path by @bsatoriu in #131
• Feature/algorithms update by @grallewellyn in #132
• Feature/update pangeo extensions by @grallewellyn in #133
• Feature/add r paws by @grallewellyn in #135
• Feature/move yml 1038 by @grallewellyn in #137
• Remove package by @grallewellyn in #136
• chore: update titiler-stac by @jjfrench in #138
• Alg name & branch to notification and popup by @grallewellyn in #140
• upgraded to maap-py v4.1.0 by @marjo-luc in #141
• Add new maap_base image by @sujen1412 in #139
• Remove vanilla by @grallewellyn in #142
• Bug/fix libpq dev r by @grallewellyn in #143
• Develop into main by @bsatoriu in #144

New Contributors

• @jjfrench made their first contribution in #138

Full Changelog: v4.0.0...v4.1.0

v4.1.0rc2-uat

What's Changed

• Feature/upgrade pangeo extensions by @grallewellyn in #145
• Feature/update maap help tour by @grallewellyn in #61
• Bugs/presigned url by @grallewellyn in #62
• Added memory extension by @grallewellyn in #59
• hysds base-image [skip ci] by @bsatoriu in #65
• Feature/libmamba solver by @grallewellyn in #64
• Update stac_ipyleaflet to 0.3.5 for Pangeo by @anilnatha in #66
• Remove hysds base_image [skip-ci] by @bsatoriu in #68
• Bugs/quick fix libmamba by @grallewellyn in #69
• Bugs/presigned url by @grallewellyn in #70
• Bugs/git tour link by @grallewellyn in #71
• updated custom ext versions by @marjo-luc in #72
• Feature/update maap py by @grallewellyn in #73
• bumped jupyter server extension by @marjo-luc in #74
• Bump maap-py to v3.1.3 by @bsatoriu in #75
• Bugs/libmamba default by @grallewellyn in #77
• Update entrypoint.sh by @bsatoriu in #78
• Bugs/double submit null username by @grallewellyn in #79
• Features/update workspace dependencies by @grallewellyn in #80
• Feature/conda forge default by @grallewellyn in #81
• Feature/missing r package by @grallewellyn in #83
• Add stac_ipyleaflet by @anilnatha in #84
• Feature/triaged job folder by @grallewellyn in #88
• Fix s3fs sidecar image urls by @bsatoriu in #89
• Bug/update dps version by @grallewellyn in #90
• Bug/jlab launch error by @grallewellyn in #94
• Add additional packages to Pangeo by @anilnatha in #93
• Awscli bug by @grallewellyn in #95
• Feature/move rio tiler by @grallewellyn in #86
• Removed ability to build and launch ISCE2 and RGEDI images/workspaces. by @anilnatha in #96
• Feature/update maap help by @grallewellyn in #97
• Feature/update s3fs by @grallewellyn in #98
• Bug/resolve merge conflicts by @grallewellyn in #101
• upgrade maap-py to v3.1.5 by @grallewellyn in #102
• Update devfile metadata by @bsatoriu in #103
• Bug/missing maap cfg by @grallewellyn in #104
• Bug/maap py dependency errors by @grallewellyn in #106
• Bug/add maap py var by @grallewellyn in #107
• Feature/extract jupyter extension installs by @grallewellyn in #110
• Bug/remove conda run by @grallewellyn in #112
• Feature/jlab4 upgrade by @marjo-luc in #113
• Feature/extract plotly by @grallewellyn in #115
• Feature/update packages by @grallewellyn in #114
• Add devfile docker path env vars by @bsatoriu in #117
• Feature/rename workspaces by @anilnatha in #116
• Feature/add unzip by @grallewellyn in #118
• Create devfile_compile.py by @bsatoriu in #121
• Feature/no maap cfg by @grallewellyn in #120
• Update workspace yaml by @anilnatha in #124
• Update Python devfile.yaml DOCKERIMAGE_PATH env by @bsatoriu in #125
• Bug/update maap host by @grallewellyn in #126
• Algorithm registration links now open in a new tab by @grallewellyn in #127
• Add JWT proxy container to workspaces by @bsatoriu in #128
• Remove maap cfg from algorithms extension by @grallewellyn in #129
• Feature/remove api endpoint by @grallewellyn in #130
• Bug/presigned url relative path by @bsatoriu in #131
• Feature/algorithms update by @grallewellyn in #132
• Feature/update pangeo extensions by @grallewellyn in #133
• Feature/add r paws by @grallewellyn in #135
• Feature/move yml 1038 by @grallewellyn in #137
• Remove package by @grallewellyn in #136
• chore: update titiler-stac by @jjfrench in #138
• Alg name & branch to notification and popup by @grallewellyn in #140
• upgraded to maap-py v4.1.0 by @marjo-luc in #141
• Add new maap_base image by @sujen1412 in #139
• Remove vanilla by @grallewellyn in #142
• Bug/fix libpq dev r by @grallewellyn in #143
• Develop into main by @bsatoriu in #144

New Contributors

• @jjfrench made their first contribution in #138

Full Changelog: v4.0.0...v4.1.0rc2-uat

v4.1.0-uat

What's Changed

• Feature/update maap help tour by @grallewellyn in #61
• Bugs/presigned url by @grallewellyn in #62
• Added memory extension by @grallewellyn in #59
• hysds base-image [skip ci] by @bsatoriu in #65
• Feature/libmamba solver by @grallewellyn in #64
• Update stac_ipyleaflet to 0.3.5 for Pangeo by @anilnatha in #66
• Remove hysds base_image [skip-ci] by @bsatoriu in #68
• Bugs/quick fix libmamba by @grallewellyn in #69
• Bugs/presigned url by @grallewellyn in #70
• Bugs/git tour link by @grallewellyn in #71
• updated custom ext versions by @marjo-luc in #72
• Feature/update maap py by @grallewellyn in #73
• bumped jupyter server extension by @marjo-luc in #74
• Bump maap-py to v3.1.3 by @bsatoriu in #75
• Bugs/libmamba default by @grallewellyn in #77
• Update entrypoint.sh by @bsatoriu in #78
• Bugs/double submit null username by @grallewellyn in #79
• Features/update workspace dependencies by @grallewellyn in #80
• Feature/conda forge default by @grallewellyn in #81
• Feature/missing r package by @grallewellyn in #83
• Add stac_ipyleaflet by @anilnatha in #84
• Feature/triaged job folder by @grallewellyn in #88
• Fix s3fs sidecar image urls by @bsatoriu in #89
• Bug/update dps version by @grallewellyn in #90
• Bug/jlab launch error by @grallewellyn in #94
• Add additional packages to Pangeo by @anilnatha in #93
• Awscli bug by @grallewellyn in #95
• Feature/move rio tiler by @grallewellyn in #86
• Removed ability to build and launch ISCE2 and RGEDI images/workspaces. by @anilnatha in #96
• Feature/update maap help by @grallewellyn in #97
• Feature/update s3fs by @grallewellyn in #98
• Bug/resolve merge conflicts by @grallewellyn in #101
• upgrade maap-py to v3.1.5 by @grallewellyn in #102
• Update devfile metadata by @bsatoriu in #103
• Bug/missing maap cfg by @grallewellyn in #104
• Bug/maap py dependency errors by @grallewellyn in #106
• Bug/add maap py var by @grallewellyn in #107
• Feature/extract jupyter extension installs by @grallewellyn in #110
• Bug/remove conda run by @grallewellyn in #112
• Feature/jlab4 upgrade by @marjo-luc in #113
• Feature/extract plotly by @grallewellyn in #115
• Feature/update packages by @grallewellyn in #114
• Add devfile docker path env vars by @bsatoriu in #117
• Feature/rename workspaces by @anilnatha in #116
• Feature/add unzip by @grallewellyn in #118
• Create devfile_compile.py by @bsatoriu in #121
• Feature/no maap cfg by @grallewellyn in #120
• Update workspace yaml by @anilnatha in #124
• Update Python devfile.yaml DOCKERIMAGE_PATH env by @bsatoriu in #125
• Bug/update maap host by @grallewellyn in #126
• Algorithm registration links now open in a new tab by @grallewellyn in #127
• Add JWT proxy container to workspaces by @bsatoriu in #128
• Remove maap cfg from algorithms extension by @grallewellyn in #129
• Feature/remove api endpoint by @grallewellyn in #130
• Bug/presigned url relative path by @bsatoriu in #131
• Feature/algorithms update by @grallewellyn in #132
• Feature/update pangeo extensions by @grallewellyn in #133
• Feature/add r paws by @grallewellyn in #135
• Feature/move yml 1038 by @grallewellyn in #137
• Remove package by @grallewellyn in #136
• chore: update titiler-stac by @jjfrench in #138
• Alg name & branch to notification and popup by @grallewellyn in #140
• upgraded to maap-py v4.1.0 by @marjo-luc in #141
• Add new maap_base image by @sujen1412 in #139
• Remove vanilla by @grallewellyn in #142
• Bug/fix libpq dev r by @grallewellyn in #143
• Develop into main by @bsatoriu in #144

New Contributors

• @jjfrench made their first contribution in #138

Full Changelog: v4.0.0...v4.1.0-uat

v4.0.0 Release

What's Changed

• Jupyterlab 4 upgrade, all extensions also upgraded to be compatible with jupyterlab 4
• All extensions available to be installed via pip now
• Updated most package versions in workspace base and jupyterlab images
• Added lonboard to all images
• Added all packages from the previous vanilla workspace (now called python default) to the R workspace
• The default base image in the algorithm registration page now corresponds to the correct MAS environment and workspace type

Full Changelog: v3.1.5...v4.0.0