[Pathfinder] Initial batch run support#138
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Clementsaic wants to merge 1 commit intoreleasefrom
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Allows running pathfinder on a batch of reconfigurations by specifying a directory containing (properly labelled) initial and final states as the input file.
Does not currently support dividing the work across multiple processes at the same time, instead just starts new pathfinder processes sequentially for each reconfiguration in the directory (and waits for each process to finish before starting the next one), but that is something we could look into if it seems useful (worth considering the additional resource strain of running in parallel though).