p link: set phosphate bond angle sigmas to 1.5#68
Merged
keitaroyam merged 1 commit intomasterfrom Mar 24, 2026
Merged
Conversation
GaribMurshudov
approved these changes
Mar 24, 2026
Contributor
GaribMurshudov
left a comment
There was a problem hiding this comment.
İ think these are reasonable. But İ would prefer if in future Robbie J would approve
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Some of phosphate bond angle sigmas in the p link (the standard link for DNA/RNA) were set to 3.0 degrees (acedrg's default max) due to a lack of reference data. These large sigma values can lead to distorted geometry during refinement.