Release v2.0: SNP calling with GATK 3.8

Aerin13 released this 01 Jun 21:44

· 320 commits to master since this release

ebc8f9a

The sequence_handling wiki is fully up to date with this release.

This release adds the following handlers:

Haplotype_Caller
Genotype_GVCFs
Create_HC_Subset
Variant_Recalibrator
Variant_Filtering
Variant_Analysis
Realigner_Target_Creator
Indel_Realigner

10x Genomics linked reads and Nanopore long reads processing support is planned for future versions.

Assets 2