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fixes arguments and also copies the folder for mrxs files#79

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moerlemans wants to merge 7 commits intomainfrom
fix-cli-copying-tool
Open

fixes arguments and also copies the folder for mrxs files#79
moerlemans wants to merge 7 commits intomainfrom
fix-cli-copying-tool

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@moerlemans
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Fixes #68 and #70. It now also copies the accompanying folder for mrxs files (which is needed)

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LGTM

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Also fixed #105 now. Uses #104

@moerlemans moerlemans self-assigned this Aug 8, 2024
@moerlemans moerlemans requested a review from jonasteuwen August 8, 2024 14:46
@moerlemans moerlemans linked an issue Aug 12, 2024 that may be closed by this pull request
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CLI tool has wrong name for args Copy masks, annotations, caches and/or features with CLI tool

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