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249 changes: 232 additions & 17 deletions .github/workflows/Build.yml
Original file line number Diff line number Diff line change
Expand Up @@ -23,46 +23,261 @@ on:
- '.github/workflows/Build.yml'
jobs:
generate:
name: MPI${{ matrix.mpi }}/${{ matrix.mode }}
runs-on: ubuntu-24.04
container:
image: luohaothu/gcc-trunk:latest
name: ${{ matrix.os }}/${{ matrix.compiler }}/MPI${{ matrix.mpi }}/${{ matrix.mode }}
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: [ubuntu-24.04, macos-15]
compiler: [clang, gcc]
mpi: [ON, OFF]
mode: [Debug, Release]
# exclude :
# - os: macos-12
# compiler: clang
# mpi: ON
# mode: Release # clang tends to emit illegal inst for macOS with MPI on release mode (-O3)
if: "!contains(github.event.head_commit.message, 'skip build')"
steps:
- name: Checkout
uses: actions/checkout@master
with:
submodules: recursive
fetch-depth: 0
- name: Install dependence
run: |
export INPUT_MPI=${{ matrix.mpi }}
if [ "$RUNNER_OS" == "Linux" ]; then
sudo apt update
sudo apt install -y python3-pip python3-sphinx lcov libboost-all-dev doxygen libtbb-dev libopenmpi-dev ninja-build
if [ "$INPUT_MPI" == "ON" ]; then
sudo apt install -y libhdf5-mpi-dev
else
sudo apt install -y libhdf5-dev
fi
echo "DOXYGEN_DIR=/usr/bin" >> "$GITHUB_ENV"
echo "TBB_DIR=/usr/lib/x86_64-linux-gnu/cmake/TBB" >> "$GITHUB_ENV"
elif [ "$RUNNER_OS" == "macOS" ]; then
# Ensure Homebrew is available (macOS: /opt/homebrew or in PATH).
if command -v brew >/dev/null 2>&1; then
eval "$(brew shellenv)"
elif [ -x "/opt/homebrew/bin/brew" ]; then
eval "$(/opt/homebrew/bin/brew shellenv)"
else
echo "Homebrew not found"
exit 1
fi
echo "$(brew --prefix)/bin" >> "$GITHUB_PATH"
brew install doxygen tbb lcov boost open-mpi ninja sphinx-doc
echo "$(brew --prefix sphinx-doc)/bin" >> "$GITHUB_PATH"
if [ "$INPUT_MPI" == "ON" ]; then
brew install hdf5-mpi
else
brew install hdf5
fi
echo "DOXYGEN_DIR=$(brew --prefix doxygen)/bin" >> "$GITHUB_ENV"
echo "TBB_DIR=$(brew --prefix tbb)/lib/cmake/TBB" >> "$GITHUB_ENV"
else
echo "$RUNNER_OS not supported"
exit 1
fi

- name: Install CMake
run: |
if [ "$RUNNER_OS" == "Linux" ]; then
USER_BASE=$(python3 -m site --user-base)
echo "$USER_BASE/bin" >> "$GITHUB_PATH"
python3 -m pip install --user --upgrade "cmake==4.0.2"
elif [ "$RUNNER_OS" == "macOS" ]; then
brew install cmake
else
echo "$RUNNER_OS not supported"
exit 1
fi

- name: Install toolchain
run: |
if [ "$RUNNER_OS" == "Linux" ]; then
if [ "${{ matrix.compiler }}" == "gcc" ]; then
sudo apt update
sudo apt install -y software-properties-common
sudo add-apt-repository -y ppa:ubuntu-toolchain-r/ppa
sudo apt update
if sudo apt install -y gcc-15 g++-15; then
echo "CC=gcc-15" >> "$GITHUB_ENV"
echo "CXX=g++-15" >> "$GITHUB_ENV"
else
if ! command -v brew >/dev/null 2>&1; then
/bin/bash -c "$(curl -fsSL https://raw.githubusercontent.com/Homebrew/install/HEAD/install.sh)"
fi
eval "$(/home/linuxbrew/.linuxbrew/bin/brew shellenv)"
brew install gcc@15 binutils
GCC_HOME=$(brew --prefix gcc@15)
echo "CC=$GCC_HOME/bin/gcc-15" >> "$GITHUB_ENV"
echo "CXX=$GCC_HOME/bin/g++-15" >> "$GITHUB_ENV"
echo "$GCC_HOME/bin" >> "$GITHUB_PATH"
echo "$(brew --prefix binutils)/bin" >> "$GITHUB_PATH"
fi
else
wget -q https://apt.llvm.org/llvm.sh
chmod +x llvm.sh
sudo ./llvm.sh 21
sudo apt install -y clang-21 llvm-21 lld-21 lldb-21 libomp-21-dev libc++-21-dev libc++abi-21-dev
libcxx_module_path=$(dpkg -L libc++-21-dev | grep -m1 '/std.cppm$' || true)
if [ -n "$libcxx_module_path" ]; then
libcxx_module_dir=$(dirname "$libcxx_module_path")
sudo mkdir -p /lib/share/libc++
sudo ln -sfn "$libcxx_module_dir" /lib/share/libc++/v1
fi
libcxx_inc_path=$(dpkg -L libc++-21-dev | grep -m1 'std/algorithm.inc$' || true)
if [ -n "$libcxx_inc_path" ]; then
libcxx_inc_root=$(dirname "$(dirname "$libcxx_inc_path")")
CXXFLAGS="-stdlib=libc++ -isystem $libcxx_inc_root -Wno-thread-safety -Wno-error=thread-safety-analysis"
else
CXXFLAGS="-stdlib=libc++ -isystem /usr/include/c++/v1 -isystem /usr/lib/llvm-21/include/c++/v1 -Wno-thread-safety -Wno-error=thread-safety-analysis"
fi
echo "CC=clang-21" >> "$GITHUB_ENV"
echo "CXX=clang++-21" >> "$GITHUB_ENV"
echo "CXXFLAGS=$CXXFLAGS" >> "$GITHUB_ENV"
echo "LDFLAGS=-stdlib=libc++" >> "$GITHUB_ENV"
fi
elif [ "$RUNNER_OS" == "macOS" ]; then
if [ "${{ matrix.compiler }}" == "gcc" ]; then
brew install gcc@15
GCC_HOME=$(brew --prefix gcc@15)
echo "CC=$GCC_HOME/bin/gcc-15" >> "$GITHUB_ENV"
echo "CXX=$GCC_HOME/bin/g++-15" >> "$GITHUB_ENV"
echo "$GCC_HOME/bin" >> "$GITHUB_PATH"
else
brew install llvm@21
LLVM_HOME=$(brew --prefix llvm@21)
SDKROOT=$(xcrun --show-sdk-path || true)
echo "CC=$LLVM_HOME/bin/clang" >> "$GITHUB_ENV"
echo "CXX=$LLVM_HOME/bin/clang++" >> "$GITHUB_ENV"
echo "$LLVM_HOME/bin" >> "$GITHUB_PATH"
if [ -n "$SDKROOT" ]; then
echo "SDKROOT=$SDKROOT" >> "$GITHUB_ENV"
echo "CFLAGS=-isysroot $SDKROOT" >> "$GITHUB_ENV"
echo "CXXFLAGS=-stdlib=libc++ -isystem $LLVM_HOME/include/c++/v1 -isysroot $SDKROOT -Wno-thread-safety -Wno-error=thread-safety-analysis" >> "$GITHUB_ENV"
echo "LDFLAGS=-stdlib=libc++ -L$LLVM_HOME/lib -Wl,-rpath,$LLVM_HOME/lib -Wl,-syslibroot,$SDKROOT" >> "$GITHUB_ENV"
else
echo "CXXFLAGS=-stdlib=libc++ -isystem $LLVM_HOME/include/c++/v1 -Wno-thread-safety -Wno-error=thread-safety-analysis" >> "$GITHUB_ENV"
echo "LDFLAGS=-stdlib=libc++ -L$LLVM_HOME/lib -Wl,-rpath,$LLVM_HOME/lib" >> "$GITHUB_ENV"
fi
modules_json="$LLVM_HOME/share/libc++/v1/libc++.modules.json"
if [ ! -f "$modules_json" ]; then
modules_json=$(find "$LLVM_HOME" -name libc++.modules.json -print -quit || true)
fi
if [ -z "$modules_json" ]; then
SDKROOT=$(xcrun --show-sdk-path || true)
if [ -n "$SDKROOT" ]; then
sdk_modules_json="$SDKROOT/usr/share/libc++/v1/libc++.modules.json"
if [ -f "$sdk_modules_json" ]; then
modules_json="$sdk_modules_json"
else
modules_json=$(find "$SDKROOT" -name libc++.modules.json -print -quit || true)
fi
fi
fi
if [ -z "$modules_json" ]; then
clt_modules_json="/Library/Developer/CommandLineTools/usr/share/libc++/v1/libc++.modules.json"
if [ -f "$clt_modules_json" ]; then
modules_json="$clt_modules_json"
fi
fi
if [ -z "$modules_json" ]; then
CLANG_RESOURCE_DIR="$("$LLVM_HOME/bin/clang" -print-resource-dir 2>/dev/null || true)"
if [ -n "$CLANG_RESOURCE_DIR" ]; then
clang_modules_json="$CLANG_RESOURCE_DIR/share/libc++/v1/libc++.modules.json"
if [ -f "$clang_modules_json" ]; then
modules_json="$clang_modules_json"
else
modules_json=$(find "$CLANG_RESOURCE_DIR" -name libc++.modules.json -print -quit || true)
fi
fi
fi
if [ -z "$modules_json" ]; then
LLVM_SRC_DIR="$RUNNER_TEMP/llvm-project"
LLVM_BUILD_DIR="$RUNNER_TEMP/llvm-project-build"
git clone --depth 1 --branch release/21.x https://github.com/llvm/llvm-project.git "$LLVM_SRC_DIR"
cmake -G Ninja -S "$LLVM_SRC_DIR/runtimes" -B "$LLVM_BUILD_DIR" \
-DLLVM_ENABLE_RUNTIMES="libcxx;libcxxabi;libunwind" \
-DLIBCXX_INSTALL_MODULES=ON \
-DLIBCXX_INSTALL_MODULE_DIR="share/libc++/v1" \
-DCMAKE_INSTALL_PREFIX="$LLVM_HOME" \
-DCMAKE_C_COMPILER="$LLVM_HOME/bin/clang" \
-DCMAKE_CXX_COMPILER="$LLVM_HOME/bin/clang++" \
-DCMAKE_BUILD_TYPE=Release
cmake --build "$LLVM_BUILD_DIR" --target install --parallel 2
modules_json=$(find "$LLVM_HOME" -name libc++.modules.json -print -quit || true)
fi
if [ -n "$modules_json" ] && [ ! -f "$modules_json" ]; then
modules_json=""
fi
if [ -n "$modules_json" ]; then
echo "CMAKE_CXX_STDLIB_MODULES_JSON=$modules_json" >> "$GITHUB_ENV"
fi
fi
else
echo "$RUNNER_OS not supported"
exit 1
fi
- name: Set parallelism
run: |
if [ "$RUNNER_OS" == "Linux" ]; then
echo "NPROC=$(nproc)" >> "$GITHUB_ENV"
else
echo "NPROC=$(sysctl -n hw.ncpu)" >> "$GITHUB_ENV"
fi
- name: Make directory
run: mkdir -p build
- name: Generate
working-directory: ./build
run: |
wget https://github.com/Kitware/CMake/releases/download/v4.0.2/cmake-4.0.2-linux-x86_64.sh
chmod +x cmake-4.0.2-linux-x86_64.sh
mkdir -p cmake
./cmake-4.0.2-linux-x86_64.sh --skip-license --prefix=$(pwd)/cmake
apt update && apt install -y ninja-build libhdf5-dev libhdf5-openmpi-dev libboost-all-dev python3-pip python3-sphinx doxygen
export PATH=$(pwd)/cmake/bin:$PATH
cmake -DCMAKE_C_COMPILER=gcc -DCMAKE_CXX_COMPILER=g++ -G Ninja -B build \
-DCMAKE_INSTALL_PREFIX=$(pwd)/install -DOPFLOW_BUILD_ALL=ON -DOPFLOW_ENABLE_MODULE=ON \
-DCMAKE_BUILD_TYPE=${{ matrix.mode }} -DOPFLOW_WITH_HDF5=ON -DOPFLOW_WITH_MPI=${{ matrix.mpi }}
CMAKE_STDLIB_JSON_ARG=""
if [ -n "$CMAKE_CXX_STDLIB_MODULES_JSON" ]; then
CMAKE_STDLIB_JSON_ARG="-DCMAKE_CXX_STDLIB_MODULES_JSON=$CMAKE_CXX_STDLIB_MODULES_JSON"
fi
OPFLOW_ENABLE_MODULE=ON
if [ "${{ matrix.compiler }}" = "gcc" ]; then
OPFLOW_ENABLE_MODULE=OFF
fi
cmake \
-G Ninja \
-DCMAKE_BUILD_TYPE="${{ matrix.mode }}" \
-DCMAKE_C_COMPILER="${CC}" \
-DCMAKE_CXX_COMPILER="${CXX}" \
-DCMAKE_CXX_FLAGS="${CXXFLAGS}" \
-DCMAKE_EXE_LINKER_FLAGS="${LDFLAGS}" \
${CMAKE_STDLIB_JSON_ARG} \
-DOPFLOW_WITH_HDF5=ON \
-DBENCHMARK_ENABLE_TESTING=OFF \
-DBENCHMARK_ENABLE_WERROR=OFF \
-DOPFLOW_BUILD_ALL=ON \
-DOPFLOW_INSTALL=OFF \
-DOPFLOW_WITH_VTK=OFF \
-DOPFLOW_TBB_EXTERNAL=ON \
-DDOXYGEN_DIR="${DOXYGEN_DIR}" \
-DTBB_DIR="${TBB_DIR}" \
-DOPFLOW_ENABLE_MODULE="${OPFLOW_ENABLE_MODULE}" \
-DOPFLOW_WITH_MPI=${{ matrix.mpi }} \
.. || {
echo "==== CMakeFiles/CMakeError.log ===="
cat CMakeFiles/CMakeError.log || true
echo "==== CMakeFiles/CMakeOutput.log ===="
cat CMakeFiles/CMakeOutput.log || true
exit 1
}
if [ "$RUNNER_OS" == "Linux" ]; then
cmake --build build -t All_CI --parallel $(nproc) --config ${{ matrix.mode }}
cmake --build . -t All_CI --parallel "${NPROC}" --config ${{ matrix.mode }}
else
cmake --build build -t All_CI --parallel $(nproc) --config ${{ matrix.mode }}
cmake --build . -t All_CI --parallel "${NPROC}" --config ${{ matrix.mode }}
fi
- name: Test
working-directory: ./build
run: |
if [ "$RUNNER_OS" == "Linux" ]; then
ctest --parallel $(nproc) -C ${{ matrix.mode }} -VV
ctest --parallel "${NPROC}" -C ${{ matrix.mode }} -VV
else
ctest --parallel $(nproc) -C ${{ matrix.mode }} -VV
ctest --parallel "${NPROC}" -C ${{ matrix.mode }} -VV
fi
32 changes: 21 additions & 11 deletions CMakeLists.txt
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
# ----------------------------------------------------------------------------
#
# Copyright (c) 2019 - 2025 by the OpFlow developers
# Copyright (c) 2019 - 2026 by the OpFlow developers
#
# This file is part of OpFlow.
#
Expand All @@ -15,13 +15,18 @@
# ----------------------------------------------------------------------------

cmake_minimum_required(VERSION 4.0.2 FATAL_ERROR)
# The specific value used for CMake==4.0.2
set(CMAKE_EXPERIMENTAL_CXX_IMPORT_STD
# This specific value changes as experimental support evolves. See
# `Help/dev/experimental.rst` in the CMake source corresponding to
# your CMake build for the exact value to use.
"a9e1cf81-9932-4810-974b-6eccaf14e457")
set(CMAKE_EXPERIMENTAL_EXPORT_BUILD_DATABASE 4bd552e2-b7fb-429a-ab23-c83ef53f3f13)
# The specific values used for experimental CMake features.
if(CMAKE_VERSION VERSION_GREATER_EQUAL "4.2")
set(CMAKE_EXPERIMENTAL_CXX_IMPORT_STD "d0edc3af-4c50-42ea-a356-e2862fe7a444")
set(CMAKE_EXPERIMENTAL_EXPORT_BUILD_DATABASE "73194a1d-c0b5-41b9-9190-a4512925e192")
else()
set(CMAKE_EXPERIMENTAL_CXX_IMPORT_STD
# This specific value changes as experimental support evolves. See
# `Help/dev/experimental.rst` in the CMake source corresponding to
# your CMake build for the exact value to use.
"a9e1cf81-9932-4810-974b-6eccaf14e457")
set(CMAKE_EXPERIMENTAL_EXPORT_BUILD_DATABASE 4bd552e2-b7fb-429a-ab23-c83ef53f3f13)
endif()
set(CMAKE_EXPORT_BUILD_DATABASE 1)

# ----------------------------------------------------------------------------
Expand All @@ -41,9 +46,6 @@ project(opflow VERSION ${OPFLOW_VERSION} LANGUAGES C CXX)
set(OPFLOW_VERSION_STRING "${OPFLOW_VERSION} - ${SHORT_SHA1} - ${GIT_CHANGE}")
message(STATUS "Build opflow: ${OPFLOW_VERSION_STRING}")

set(CMAKE_EXPERIMENTAL_EXPORT_BUILD_DATABASE 4bd552e2-b7fb-429a-ab23-c83ef53f3f13)
set(CMAKE_EXPORT_BUILD_DATABASE 1)

set(CMAKE_CXX_MODULE_STD 1)

include(GNUInstallDirs)
Expand Down Expand Up @@ -108,6 +110,9 @@ option(OPFLOW_SINGLE_PRECISION "Use float as default real type" OFF)
option(OPFLOW_WITH_OPENMP "Build OpFlow with OpenMP support" ON)
option(OPFLOW_WITH_MPI "Build OpFlow with MPI support" OFF)

# Disable deprecated MPI C++ bindings across all targets to avoid link errors.
add_compile_definitions(OMPI_SKIP_MPICXX MPICH_SKIP_MPICXX)

# utility options
option(OPFLOW_WITH_HDF5 "Build OpFlow with HDF5 support" OFF)

Expand All @@ -129,6 +134,11 @@ option(OPFLOW_SANITIZE_UB "Enable undefined behavior sanitizer in tests" OFF)
option(OPFLOW_BUILD_WARNINGS "Enable compiler warnings" OFF)
option(OPFLOW_NO_EXCEPTIONS "Compile with -fno-exceptions" OFF)
option(OPFLOW_ENABLE_MODULE "Enable C++ modules support" OFF)
if(OPFLOW_ENABLE_MODULE)
set(OPFLOW_TARGET_SCOPE PUBLIC)
else()
set(OPFLOW_TARGET_SCOPE INTERFACE)
endif()

# install options
option(OPFLOW_INSTALL "Generate the install target" ${PROJECT_IS_TOP_LEVEL})
Expand Down
18 changes: 15 additions & 3 deletions examples/AMR/Poisson.cpp
Original file line number Diff line number Diff line change
@@ -1,6 +1,9 @@
#include "Poisson.hpp"
#include "pch.hpp"
#include <chrono>
#include <ctime>
#include <filesystem>
#include <string>

using namespace OpFlow;

Expand Down Expand Up @@ -83,8 +86,17 @@ void Poisson() {
.build();
//p.initBy([](auto&& x) { return std::sqrt(Math::pow2(x[0] - 0.5) + Math::pow2(x[1] - 0.75)) - 0.15; });
p = 0;
auto root = std::format("Result_{:%m-%d_%H-%M-%S}/",
std::chrono::current_zone()->to_local(std::chrono::system_clock::now()));
auto now = std::chrono::system_clock::now();
auto now_time = std::chrono::system_clock::to_time_t(now);
std::tm local_tm {};
#if defined(_WIN32)
localtime_s(&local_tm, &now_time);
#else
localtime_r(&now_time, &local_tm);
#endif
char time_buf[32];
std::strftime(time_buf, sizeof(time_buf), "%m-%d_%H-%M-%S", &local_tm);
auto root = std::string("Result_") + time_buf + "/";
std::filesystem::create_directory(root);

SemiStructSolverParams<SemiStructSolverType::FAC> params;
Expand All @@ -95,4 +107,4 @@ void Poisson() {

Utils::VTKAMRStream pf(root + "/p");
pf << p;
}
}
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